Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:02 (2544): wrapper (7.7.26015): starting
21:43:02 (2544): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:43:02] Arguments: --nthreads 8
[2025-11-26 21:43:02] Threads: 8
[2025-11-26 21:43:02] Checking for CVMFS
[2025-11-26 21:43:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:43:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:43:05] 2.11.2.0 23762 285884 139904 153334 3 85 18787022 25165824 1081 130560 12 130971424 99.864 88255494 2981 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 21:43:05] CVMFS is ok
[2025-11-26 21:43:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:43:05] Checking for apptainer binary...
[2025-11-26 21:43:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:43:05] Running /usr/bin/apptainer --version
[2025-11-26 21:43:05] apptainer version 1.3.2-1.el7
[2025-11-26 21:43:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:43:21] cg-vwn242.simple-grid.lan
[2025-11-26 21:43:21] apptainer works
[2025-11-26 21:43:21] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:43:21] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:43:22] Starting ATLAS job with PandaID=6895374247
[2025-11-26 21:43:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:31:45]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:31:45] 2025-11-27 18:30:57,521 | INFO     | time since job start (78163s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:30:58,467 | INFO     | monitor loop #5294: job 0:6895374247 is in state 'finished'
[2025-11-27 19:31:45] 2025-11-27 18:30:58,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:31:45] 2025-11-27 18:30:59,528 | INFO     | time since job start (78165s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:31:00,974 | INFO     | monitor loop #5295: job 0:6895374247 is in state 'finished'
[2025-11-27 19:31:45] 2025-11-27 18:31:00,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:31:45] 2025-11-27 18:31:01,535 | INFO     | time since job start (78167s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:31:03,481 | INFO     | monitor loop #5296: job 0:6895374247 is in state 'finished'
[2025-11-27 19:31:45] 2025-11-27 18:31:03,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:31:45] 2025-11-27 18:31:03,557 | INFO     | time since job start (78169s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:31:05,566 | INFO     | time since job start (78171s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:31:05,989 | INFO     | monitor loop #5297: job 0:6895374247 is in state 'finished'
[2025-11-27 19:31:45] 2025-11-27 18:31:05,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:31:45] 2025-11-27 18:31:06,857 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:31:45] 2025-11-27 18:31:06,858 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 19:31:45] 2025-11-27 18:31:06,860 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895374247/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:31:45] 2025-11-27 18:31:06,860 | INFO     | extracted standard info from prmon json
[2025-11-27 19:31:45] 2025-11-27 18:31:06,860 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:31:45] 2025-11-27 18:31:06,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:31:45] 2025-11-27 18:31:06,895 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:31:45] 2025-11-27 18:31:06,897 | INFO     | sum of square deviations: 636672162451.9238
[2025-11-27 19:31:45] 2025-11-27 18:31:06,976 | INFO     | sum of deviations: 2531972171609.201
[2025-11-27 19:31:45] 2025-11-27 18:31:06,986 | INFO     | mean x: 1764229409.029111
[2025-11-27 19:31:45] 2025-11-27 18:31:06,987 | INFO     | mean y: 2836362.832415421
[2025-11-27 19:31:45] 2025-11-27 18:31:06,987 | INFO     | intersect: -7013301661.473877
[2025-11-27 19:31:45] 2025-11-27 18:31:06,988 | INFO     | chi2: 27.26179727128536
[2025-11-27 19:31:45] 2025-11-27 18:31:06,990 | INFO     | sum of square deviations: 629188262919.1073
[2025-11-27 19:31:45] 2025-11-27 18:31:07,069 | INFO     | sum of deviations: 2945327339906.855
[2025-11-27 19:31:45] 2025-11-27 18:31:07,070 | INFO     | mean x: 1764229256.5331755
[2025-11-27 19:31:45] 2025-11-27 18:31:07,070 | INFO     | mean y: 2844784.2654028437
[2025-11-27 19:31:45] 2025-11-27 18:31:07,070 | INFO     | intersect: -8255784578.944396
[2025-11-27 19:31:45] 2025-11-27 18:31:07,071 | INFO     | chi2: 24.129142968222048
[2025-11-27 19:31:45] 2025-11-27 18:31:07,071 | INFO     | current chi2=24.129142968222048 (change=11.491004323338991 %)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,072 | INFO     | right removable region: 1265
[2025-11-27 19:31:45] 2025-11-27 18:31:07,073 | INFO     | sum of square deviations: 629187465039.1057
[2025-11-27 19:31:45] 2025-11-27 18:31:07,123 | INFO     | sum of deviations: 1989136005619.4058
[2025-11-27 19:31:45] 2025-11-27 18:31:07,123 | INFO     | mean x: 1764229561.5331755
[2025-11-27 19:31:45] 2025-11-27 18:31:07,123 | INFO     | mean y: 2847423.037914692
[2025-11-27 19:31:45] 2025-11-27 18:31:07,123 | INFO     | intersect: -5574651713.575788
[2025-11-27 19:31:45] 2025-11-27 18:31:07,125 | INFO     | chi2: 22.287409150402166
[2025-11-27 19:31:45] 2025-11-27 18:31:07,125 | INFO     | current chi2=22.287409150402166 (change=18.246735794351604 %)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,125 | INFO     | left removable region: 10
[2025-11-27 19:31:45] 2025-11-27 18:31:07,127 | INFO     | sum of square deviations: 612929035322.7617
[2025-11-27 19:31:45] 2025-11-27 18:31:07,180 | INFO     | sum of deviations: 1996338802121.444
[2025-11-27 19:31:45] 2025-11-27 18:31:07,180 | INFO     | mean x: 1764229531.042231
[2025-11-27 19:31:45] 2025-11-27 18:31:07,180 | INFO     | mean y: 2868130.8972111554
[2025-11-27 19:31:45] 2025-11-27 18:31:07,181 | INFO     | intersect: -5743310734.350179
[2025-11-27 19:31:45] 2025-11-27 18:31:07,182 | INFO     | chi2: 14.276220903306847
[2025-11-27 19:31:45] 2025-11-27 18:31:07,182 | INFO     | current memory leak: 3.26 B/s (using 1255 data points, chi2=14.28)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,183 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | ..............................
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . Timing measurements:
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . get job = 0 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . initial setup = 6 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . payload setup = 181 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . stage-in = 0 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . payload execution = 77671 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . stage-out = 5 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | . log creation = 2 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,184 | INFO     | ..............................
[2025-11-27 19:31:45] 2025-11-27 18:31:07,287 | INFO     | 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | job summary report
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | --------------------------------------------------
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | PanDA job id: 6895374247
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | task id: 47556137
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | errors: (none)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | pilot state: finished 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | transexitcode: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | exeerrorcode: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | exeerrordiag: 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | exitcode: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:07,288 | INFO     | exitmsg: OK
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | cpuconsumptiontime: 317111 s
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | nevents: 1000
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | neventsw: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | pid: 12824
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | pgrp: 12824
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | corecount: 8
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | event service: False
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 33: 2284348, 44: 2284404, 55: 2284560, 65: 2284588, 76: 2284616, 87: 2284672, 98: 2284700, 104: 2285270, 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | --------------------------------------------------
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | 
[2025-11-27 19:31:45] 2025-11-27 18:31:07,289 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 19:31:45] 2025-11-27 18:31:07,575 | INFO     | time since job start (78173s) is within the limit (172800.0s)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:31:45] 2025-11-27 18:31:07,813 | INFO     | job 6895374247 has completed (purged errors)
[2025-11-27 19:31:45] 2025-11-27 18:31:07,814 | INFO     | overall cleanup function is called
[2025-11-27 19:31:45] 2025-11-27 18:31:08,829 | INFO     | --- collectZombieJob: --- 10, [12824]
[2025-11-27 19:31:45] 2025-11-27 18:31:08,829 | INFO     | zombie collector waiting for pid 12824
[2025-11-27 19:31:45] 2025-11-27 18:31:08,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:31:45] 2025-11-27 18:31:08,830 | INFO     | collected zombie processes
[2025-11-27 19:31:45] 2025-11-27 18:31:08,830 | INFO     | will attempt to kill all subprocesses of pid=12824
[2025-11-27 19:31:45] 2025-11-27 18:31:08,927 | INFO     | process IDs to be killed: [12824] (in reverse order)
[2025-11-27 19:31:45] 2025-11-27 18:31:09,711 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:31:45] 2025-11-27 18:31:09,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:31:45] 2025-11-27 18:31:09,714 | INFO     | did not find any defunct processes belonging to 12824
[2025-11-27 19:31:45] 2025-11-27 18:31:09,723 | INFO     | did not find any defunct processes belonging to 12824
[2025-11-27 19:31:45] 2025-11-27 18:31:09,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:31:45] 2025-11-27 18:31:09,779 | INFO     | ready for new job
[2025-11-27 19:31:45] 2025-11-27 18:31:09,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:31:45] 2025-11-27 18:31:09,783 | INFO     | ***************************************
[2025-11-27 19:31:45] 2025-11-27 18:31:09,783 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:31:45] 2025-11-27 18:31:09,783 | INFO     | ***************************************
[2025-11-27 19:31:45] 2025-11-27 18:31:09,783 | INFO     | 
[2025-11-27 19:31:45] 2025-11-27 18:31:09,784 | INFO     | pilot is running in a VM
[2025-11-27 19:31:45] 2025-11-27 18:31:09,784 | INFO     | architecture information:
[2025-11-27 19:31:45] 2025-11-27 18:31:09,791 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:31:45] 2025-11-27 18:31:10,073 | INFO     | cat /etc/os-release:
[2025-11-27 19:31:45] NAME="CentOS Linux"
[2025-11-27 19:31:45] VERSION="7 (Core)"
[2025-11-27 19:31:45] ID="centos"
[2025-11-27 19:31:45] ID_LIKE="rhel fedora"
[2025-11-27 19:31:45] VERSION_ID="7"
[2025-11-27 19:31:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:31:45] ANSI_COLOR="0;31"
[2025-11-27 19:31:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:31:45] HOME_URL="https://www.centos.org/"
[2025-11-27 19:31:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:31:45] 
[2025-11-27 19:31:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:31:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:31:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:31:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:31:45] 
[2025-11-27 19:31:45] 2025-11-27 18:31:10,074 | INFO     | ***************************************
[2025-11-27 19:31:45] 2025-11-27 18:31:10,577 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 19:31:45] 2025-11-27 18:31:10,888 | INFO     | sufficient remaining disk space (495602106368 B)
[2025-11-27 19:31:45] 2025-11-27 18:31:10,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:31:45] 2025-11-27 18:31:10,888 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:31:45] 2025-11-27 18:31:10,888 | INFO     | update_server=False
[2025-11-27 19:31:45] 2025-11-27 18:31:10,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:31:45] 2025-11-27 18:31:11,010 | INFO     | all data control threads have been joined
[2025-11-27 19:31:45] 2025-11-27 18:31:11,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 19:31:45] 2025-11-27 18:31:11,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 19:31:45] 2025-11-27 18:31:11,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:31:45] 2025-11-27 18:31:11,014 | INFO     | will abort loop
[2025-11-27 19:31:45] 2025-11-27 18:31:11,042 | INFO     | all payload control threads have been joined
[2025-11-27 19:31:45] 2025-11-27 18:31:11,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:31:45] 2025-11-27 18:31:11,624 | INFO     | all job control threads have been joined
[2025-11-27 19:31:45] 2025-11-27 18:31:11,894 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:11,933 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,016 | INFO     | [data] control thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,019 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,048 | INFO     | [payload] control thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:31:45] 2025-11-27 18:31:12,438 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,630 | INFO     | [job] control thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,691 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:12,918 | INFO     | [job] validate thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,092 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,187 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,317 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,345 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,627 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:13,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:31:45] 2025-11-27 18:31:17,937 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:31:45] 2025-11-27 18:31:30,084 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:31:45] 2025-11-27 18:31:30,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337923012416)>', '<ExcThread(monitor, started 140336982652672)>']
[2025-11-27 19:31:45] 2025-11-27 18:31:35,420 | INFO     | all workflow threads have been joined
[2025-11-27 19:31:45] 2025-11-27 18:31:35,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:31:45] 2025-11-27 18:31:35,421 | INFO     | traces error code: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:35,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:31:45] 2025-11-27 18:31:40,735 | INFO     | PID=6332 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | INFO     | .. there are 9 such processes running
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:31:45] 2025-11-27 18:31:40,736 | INFO     | [monitor] control thread has ended
[2025-11-27 19:31:45] 2025-11-27 18:31:41,037 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:31:45] 2025-11-27 18:31:41,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:31:45] 2025-11-27 18:31:41,273 [wrapper] pilotpid: 6332
[2025-11-27 19:31:45] 2025-11-27 18:31:41,352 [wrapper] Pilot exit status: 0
[2025-11-27 19:31:45] 2025-11-27 18:31:41,711 [wrapper] pandaids: 6895374247
[2025-11-27 19:31:45] 2025-11-27 18:31:42,333 [wrapper] cleanup supervisor_pilot 18761 6333
[2025-11-27 19:31:45] 2025-11-27 18:31:42,452 [wrapper] Test setup, not cleaning
[2025-11-27 19:31:45] 2025-11-27 18:31:42,548 [wrapper] apfmon messages muted
[2025-11-27 19:31:45] 2025-11-27 18:31:42,594 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:31:45] 2025-11-27 18:31:42,695 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:31:45]  *** Error codes and diagnostics ***
[2025-11-27 19:31:45]     "exeErrorCode": 0,
[2025-11-27 19:31:45]     "exeErrorDiag": "",
[2025-11-27 19:31:45]     "pilotErrorCode": 0,
[2025-11-27 19:31:45]     "pilotErrorDiag": "",
[2025-11-27 19:31:45]  *** Listing of results directory ***
[2025-11-27 19:31:45] total 1329924
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc    576529 Nov 23 23:35 pilot3.tar.gz
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc      5112 Nov 23 23:53 queuedata.json
[2025-11-27 19:31:45] -rwx------. 1 boinc boinc     36292 Nov 23 23:55 runpilot2-wrapper.sh
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc       100 Nov 26 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:31:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 21:43 run_atlas
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc       105 Nov 26 21:43 job.xml
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc      6393 Nov 26 21:43 init_data.xml
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc 410036919 Nov 26 21:43 EVNT.47483658._000934.pool.root.1
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc     15847 Nov 26 21:43 start_atlas.sh
[2025-11-27 19:31:45] drwxrwx--x. 2 boinc boinc        68 Nov 26 21:43 shared
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc    590112 Nov 26 21:43 input.tar.gz
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc         0 Nov 26 21:43 boinc_lockfile
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc      2785 Nov 26 21:43 pandaJob.out
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc    991538 Nov 26 21:48 agis_schedconf.cvmfs.json
[2025-11-27 19:31:45] drwx------. 5 boinc boinc      4096 Nov 26 21:48 pilot3
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc       533 Nov 27 19:06 boinc_task_state.xml
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc 922121020 Nov 27 19:28 HITS.47556137._009205.pool.root.1
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc      1032 Nov 27 19:29 memory_monitor_summary.json
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc   1516240 Nov 27 19:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc   2397404 Nov 27 19:29 log.47556137._009205.job.log.tgz.1
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc      8623 Nov 27 19:31 heartbeat.json
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc        95 Nov 27 19:31 pilot_heartbeat.json
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc        29 Nov 27 19:31 wrapper_checkpoint.txt
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc      8192 Nov 27 19:31 boinc_mmap_file
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc       819 Nov 27 19:31 pilotlog.txt
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc  10491942 Nov 27 19:31 log.47556137._009205.job.log.1
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc       353 Nov 27 19:31 output.list
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc       620 Nov 27 19:31 runtime_log
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc  12912640 Nov 27 19:31 result.tar.gz
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc      8817 Nov 27 19:31 runtime_log.err
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc       662 Nov 27 19:31 HYZLDm2AYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmboIKDmKGk6hm.diag
[2025-11-27 19:31:45] -rw-r--r--. 1 boinc boinc     21410 Nov 27 19:31 stderr.txt
[2025-11-27 19:31:45] HITS file was successfully produced:
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc 922121020 Nov 27 19:28 shared/HITS.pool.root.1
[2025-11-27 19:31:45]  *** Contents of shared directory: ***
[2025-11-27 19:31:45] total 1314148
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc 410036919 Nov 26 21:43 ATLAS.root_0
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc     15847 Nov 26 21:43 start_atlas.sh
[2025-11-27 19:31:45] -rw-r--r--. 2 boinc boinc    590112 Nov 26 21:43 input.tar.gz
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc 922121020 Nov 27 19:28 HITS.pool.root.1
[2025-11-27 19:31:45] -rw-------. 1 boinc boinc  12912640 Nov 27 19:31 result.tar.gz
19:31:47 (2544): run_atlas exited; CPU time 317501.533567
19:31:47 (2544): called boinc_finish(0)

</stderr_txt>
]]>

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