Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:15:58 (3059013): wrapper (7.7.26015): starting
00:15:58 (3059013): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:15:58] Arguments: --nthreads 9
[2025-11-25 00:15:58] Threads: 9
[2025-11-25 00:15:58] Checking for CVMFS
[2025-11-25 00:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:15:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:16:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:16:00] 2.13.3.0 11322 28177 233852 153271 0 84 27140145 32935937 22483 16776704 0 44165117 99.591 44278414 38444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:16:00] CVMFS is ok
[2025-11-25 00:16:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:16:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:16:00] Further information can be found at the LHC@home message board.
[2025-11-25 00:16:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:16:00] Checking for apptainer binary...
[2025-11-25 00:16:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:16:00] Running /usr/bin/apptainer --version
[2025-11-25 00:16:00] apptainer version 1.4.4-1.el9
[2025-11-25 00:16:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:16:01] c6-1-26-4.aglt2.org
[2025-11-25 00:16:01] apptainer works
[2025-11-25 00:16:01] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:16:01] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:16:01] Starting ATLAS job with PandaID=6895374008
[2025-11-25 00:16:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:05 (3059013): BOINC client no longer exists - exiting
00:20:05 (3059013): timer handler: client dead, exiting
00:27:29 (3144756): wrapper (7.7.26015): starting
00:27:29 (3144756): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:27:29] Arguments: --nthreads 9
[2025-11-25 00:27:29] Threads: 9
[2025-11-25 00:27:29] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:27:29] Checking for CVMFS
[2025-11-25 00:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:27:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:27:30] 2.13.3.0 11322 28189 237032 153272 1 283 27175704 32935937 17546 16776704 0 44361963 99.593 44279719 38443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:27:30] CVMFS is ok
[2025-11-25 00:27:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:27:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:27:30] Further information can be found at the LHC@home message board.
[2025-11-25 00:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:27:30] Checking for apptainer binary...
[2025-11-25 00:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:27:30] Running /usr/bin/apptainer --version
[2025-11-25 00:27:30] apptainer version 1.4.4-1.el9
[2025-11-25 00:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:27:30] c6-1-26-4.aglt2.org
[2025-11-25 00:27:30] apptainer works
[2025-11-25 00:27:30] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:27:30] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:27:30] Starting ATLAS job with PandaID=6895374008
[2025-11-25 00:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:00:04 (3144756): BOINC client no longer exists - exiting
16:00:04 (3144756): timer handler: client dead, exiting
16:00:22 (2100232): wrapper (7.7.26015): starting
16:00:22 (2100232): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 16:00:22] Arguments: --nthreads 9
[2025-11-25 16:00:22] Threads: 9
[2025-11-25 16:00:22] This job has been restarted, cleaning up previous attempt
[2025-11-25 16:00:22] Checking for CVMFS
[2025-11-25 16:00:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:00:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:00:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:00:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:00:22] 2.13.3.0 11322 29122 231148 153297 2 101 24392331 32935823 20462 16776704 0 48145544 99.601 47433538 38381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:00:22] CVMFS is ok
[2025-11-25 16:00:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:00:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:00:22] Further information can be found at the LHC@home message board.
[2025-11-25 16:00:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:00:22] Checking for apptainer binary...
[2025-11-25 16:00:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:00:22] Running /usr/bin/apptainer --version
[2025-11-25 16:00:23] apptainer version 1.4.4-1.el9
[2025-11-25 16:00:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:00:23] c6-1-26-4.aglt2.org
[2025-11-25 16:00:23] apptainer works
[2025-11-25 16:00:23] Set ATHENA_PROC_NUMBER=9
[2025-11-25 16:00:23] Set ATHENA_CORE_NUMBER=9
[2025-11-25 16:00:23] Starting ATLAS job with PandaID=6895374008
[2025-11-25 16:00:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:48:28]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:48:28] 2025-11-26 13:47:44,962 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:48:28] 2025-11-26 13:47:44,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:48:28] 2025-11-26 13:47:44,979 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:48:28] 2025-11-26 13:47:44,981 | INFO     | sum of square deviations: 300879375372.5505
[2025-11-26 08:48:28] 2025-11-26 13:47:45,002 | INFO     | sum of deviations: 2420933894400.096
[2025-11-26 08:48:28] 2025-11-26 13:47:45,002 | INFO     | mean x: 1764134625.570707
[2025-11-26 08:48:28] 2025-11-26 13:47:45,003 | INFO     | mean y: 3119395.5343434345
[2025-11-26 08:48:28] 2025-11-26 13:47:45,003 | INFO     | intersect: -14191450451.736689
[2025-11-26 08:48:28] 2025-11-26 13:47:45,004 | INFO     | chi2: 5.991585800789101
[2025-11-26 08:48:28] 2025-11-26 13:47:45,005 | INFO     | sum of square deviations: 296344296953.5021
[2025-11-26 08:48:28] 2025-11-26 13:47:45,023 | INFO     | sum of deviations: 2767053724016.9873
[2025-11-26 08:48:28] 2025-11-26 13:47:45,024 | INFO     | mean x: 1764134473.0812182
[2025-11-26 08:48:28] 2025-11-26 13:47:45,024 | INFO     | mean y: 3131030.9126903554
[2025-11-26 08:48:28] 2025-11-26 13:47:45,024 | INFO     | intersect: -16469110593.403284
[2025-11-26 08:48:28] 2025-11-26 13:47:45,025 | INFO     | chi2: 2.951264123356521
[2025-11-26 08:48:28] 2025-11-26 13:47:45,025 | INFO     | current chi2=2.951264123356521 (change=50.74318850665821 %)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,026 | INFO     | sum of square deviations: 291854973386.9176
[2025-11-26 08:48:28] 2025-11-26 13:47:45,041 | INFO     | sum of deviations: 2907631608802.0405
[2025-11-26 08:48:28] 2025-11-26 13:47:45,042 | INFO     | mean x: 1764134320.5908163
[2025-11-26 08:48:28] 2025-11-26 13:47:45,042 | INFO     | mean y: 3135799.448979592
[2025-11-26 08:48:28] 2025-11-26 13:47:45,042 | INFO     | intersect: -17572212166.001514
[2025-11-26 08:48:28] 2025-11-26 13:47:45,043 | INFO     | chi2: 2.2068156717035525
[2025-11-26 08:48:28] 2025-11-26 13:47:45,043 | INFO     | current chi2=2.2068156717035525 (change=25.22473152305647 %)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,044 | INFO     | sum of square deviations: 287410574497.237
[2025-11-26 08:48:28] 2025-11-26 13:47:45,060 | INFO     | sum of deviations: 2879997217914.765
[2025-11-26 08:48:28] 2025-11-26 13:47:45,060 | INFO     | mean x: 1764134168.0892308
[2025-11-26 08:48:28] 2025-11-26 13:47:45,060 | INFO     | mean y: 3134851.244102564
[2025-11-26 08:48:28] 2025-11-26 13:47:45,060 | INFO     | intersect: -17674368855.823593
[2025-11-26 08:48:28] 2025-11-26 13:47:45,061 | INFO     | chi2: 2.201427387274195
[2025-11-26 08:48:28] 2025-11-26 13:47:45,061 | INFO     | current chi2=2.201427387274195 (change=0.24416558657107323 %)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,061 | INFO     | right removable region: 974
[2025-11-26 08:48:28] 2025-11-26 13:47:45,062 | INFO     | sum of square deviations: 296343166873.8235
[2025-11-26 08:48:28] 2025-11-26 13:47:45,082 | INFO     | sum of deviations: 2161736209365.2817
[2025-11-26 08:48:28] 2025-11-26 13:47:45,082 | INFO     | mean x: 1764134778.0791879
[2025-11-26 08:48:28] 2025-11-26 13:47:45,082 | INFO     | mean y: 3128096.8040609136
[2025-11-26 08:48:28] 2025-11-26 13:47:45,082 | INFO     | intersect: -12865716048.32891
[2025-11-26 08:48:28] 2025-11-26 13:47:45,083 | INFO     | chi2: 4.193100746812816
[2025-11-26 08:48:28] 2025-11-26 13:47:45,083 | INFO     | current chi2=4.193100746812816 (change=30.01684551925171 %)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,084 | INFO     | sum of square deviations: 291852953693.97015
[2025-11-26 08:48:28] 2025-11-26 13:47:45,108 | INFO     | sum of deviations: 2073365482909.7146
[2025-11-26 08:48:28] 2025-11-26 13:47:45,108 | INFO     | mean x: 1764134930.584694
[2025-11-26 08:48:28] 2025-11-26 13:47:45,108 | INFO     | mean y: 3131097.46122449
[2025-11-26 08:48:28] 2025-11-26 13:47:45,109 | INFO     | intersect: -12529537926.354792
[2025-11-26 08:48:28] 2025-11-26 13:47:45,114 | INFO     | chi2: 4.120418534761987
[2025-11-26 08:48:28] 2025-11-26 13:47:45,114 | INFO     | current chi2=4.120418534761987 (change=1.7333762396736014 %)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,114 | INFO     | left removable region: 20
[2025-11-26 08:48:28] 2025-11-26 13:47:45,115 | INFO     | sum of square deviations: 269235702632.94305
[2025-11-26 08:48:28] 2025-11-26 13:47:45,142 | INFO     | sum of deviations: 2394875714524.0596
[2025-11-26 08:48:28] 2025-11-26 13:47:45,143 | INFO     | mean x: 1764134747.6100628
[2025-11-26 08:48:28] 2025-11-26 13:47:45,143 | INFO     | mean y: 3151470.7232704405
[2025-11-26 08:48:28] 2025-11-26 13:47:45,143 | INFO     | intersect: -15688985281.137157
[2025-11-26 08:48:28] 2025-11-26 13:47:45,144 | INFO     | chi2: 0.27751199913004976
[2025-11-26 08:48:28] 2025-11-26 13:47:45,144 | INFO     | current memory leak: 8.90 B/s (using 954 data points, chi2=0.28)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | could have reported an average CPU frequency of 2991 MHz (36 samples)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | ..............................
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . Timing measurements:
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . get job = 0 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . initial setup = 2 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . payload setup = 5 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . stage-in = 0 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . payload execution = 60392 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . stage-out = 3 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | . log creation = 0 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,150 | INFO     | ..............................
[2025-11-26 08:48:28] 2025-11-26 13:47:45,363 | INFO     | 
[2025-11-26 08:48:28] 2025-11-26 13:47:45,363 | INFO     | job summary report
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | --------------------------------------------------
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | PanDA job id: 6895374008
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | task id: 47556137
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | errors: (none)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | pilot state: finished 
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | transexitcode: 0
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | exeerrorcode: 0
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | exeerrordiag: 
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | exitcode: 0
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | exitmsg: OK
[2025-11-26 08:48:28] 2025-11-26 13:47:45,364 | INFO     | cpuconsumptiontime: 234030 s
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | nevents: 1000
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | neventsw: 0
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | pid: 2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | pgrp: 2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | corecount: 9
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | event service: False
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 11: 2284661, 60401: 2337439, 60406: 2346461, 60408: 2346645, 60416: 2346891}
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | --------------------------------------------------
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | 
[2025-11-26 08:48:28] 2025-11-26 13:47:45,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 08:48:28] 2025-11-26 13:47:45,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | job 6895374008 has completed (purged errors)
[2025-11-26 08:48:28] 2025-11-26 13:47:45,427 | INFO     | overall cleanup function is called
[2025-11-26 08:48:28] 2025-11-26 13:47:46,451 | INFO     | --- collectZombieJob: --- 10, [2155476]
[2025-11-26 08:48:28] 2025-11-26 13:47:46,451 | INFO     | zombie collector waiting for pid 2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:46,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:48:28] 2025-11-26 13:47:46,452 | INFO     | collected zombie processes
[2025-11-26 08:48:28] 2025-11-26 13:47:46,452 | INFO     | will attempt to kill all subprocesses of pid=2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:47,126 | INFO     | process IDs to be killed: [2155476] (in reverse order)
[2025-11-26 08:48:28] 2025-11-26 13:47:47,258 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:48:28] 2025-11-26 13:47:47,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:48:28] 2025-11-26 13:47:47,273 | INFO     | did not find any defunct processes belonging to 2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:47,287 | INFO     | did not find any defunct processes belonging to 2155476
[2025-11-26 08:48:28] 2025-11-26 13:47:47,289 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:48:28] 2025-11-26 13:47:47,289 | INFO     | ready for new job
[2025-11-26 08:48:28] 2025-11-26 13:47:47,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:48:28] 2025-11-26 13:47:47,294 | INFO     | ***************************************
[2025-11-26 08:48:28] 2025-11-26 13:47:47,295 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:48:28] 2025-11-26 13:47:47,295 | INFO     | ***************************************
[2025-11-26 08:48:28] 2025-11-26 13:47:47,295 | INFO     | 
[2025-11-26 08:48:28] 2025-11-26 13:47:47,298 | INFO     | architecture information:
[2025-11-26 08:48:28] 2025-11-26 13:47:47,298 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:48:28] 2025-11-26 13:47:47,318 | INFO     | cat /etc/os-release:
[2025-11-26 08:48:28] NAME="CentOS Linux"
[2025-11-26 08:48:28] VERSION="7 (Core)"
[2025-11-26 08:48:28] ID="centos"
[2025-11-26 08:48:28] ID_LIKE="rhel fedora"
[2025-11-26 08:48:28] VERSION_ID="7"
[2025-11-26 08:48:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:48:28] ANSI_COLOR="0;31"
[2025-11-26 08:48:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:48:28] HOME_URL="https://www.centos.org/"
[2025-11-26 08:48:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:48:28] 
[2025-11-26 08:48:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:48:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:48:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:48:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:48:28] 
[2025-11-26 08:48:28] 2025-11-26 13:47:47,319 | INFO     | ***************************************
[2025-11-26 08:48:28] 2025-11-26 13:47:47,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 08:48:28] 2025-11-26 13:47:47,847 | INFO     | sufficient remaining disk space (66108522496 B)
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | INFO     | update_server=False
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:28] 2025-11-26 13:47:47,848 | INFO     | aborting loop
[2025-11-26 08:48:28] 2025-11-26 13:47:47,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:48:28] 2025-11-26 13:47:47,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:48:28] 2025-11-26 13:47:48,029 | INFO     | all data control threads have been joined
[2025-11-26 08:48:28] 2025-11-26 13:47:48,436 | INFO     | all payload control threads have been joined
[2025-11-26 08:48:28] 2025-11-26 13:47:48,853 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:48,854 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:48,969 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,032 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,035 | INFO     | [data] control thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,129 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,381 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,409 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,442 | INFO     | [payload] control thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,446 | INFO     | all job control threads have been joined
[2025-11-26 08:48:28] 2025-11-26 13:47:49,631 | INFO     | [job] validate thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:49,929 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:50,299 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:50,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:28] 2025-11-26 13:47:50,452 | INFO     | [job] control thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:51,387 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:47:51,858 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:48:28] 2025-11-26 13:48:17,709 | INFO     | PID=2118906 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:48:28] 2025-11-26 13:48:17,709 | INFO     | .. there are 34 such processes running
[2025-11-26 08:48:28] 2025-11-26 13:48:17,710 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:48:28] 2025-11-26 13:48:17,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:48:28] 2025-11-26 13:48:17,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:48:28] 2025-11-26 13:48:21,033 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:48:28] 2025-11-26 13:48:22,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695980181312)>', '<ExcThread(monitor, started 140695629174528)>']
[2025-11-26 08:48:28] 2025-11-26 13:48:22,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:48:28] 2025-11-26 13:48:22,750 | INFO     | [monitor] control thread has ended
[2025-11-26 08:48:28] 2025-11-26 13:48:27,400 | INFO     | all workflow threads have been joined
[2025-11-26 08:48:28] 2025-11-26 13:48:27,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:48:28] 2025-11-26 13:48:27,401 | INFO     | traces error code: 0
[2025-11-26 08:48:28] 2025-11-26 13:48:27,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:48:28] 2025-11-26 13:48:27,845 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:48:28] 2025-11-26 13:48:27,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:48:28] 2025-11-26 13:48:27,852 [wrapper] pilotpid: 2118906
[2025-11-26 08:48:28] 2025-11-26 13:48:27,855 [wrapper] Pilot exit status: 0
[2025-11-26 08:48:28] 2025-11-26 13:48:27,888 [wrapper] pandaids: 6895374008 6895374008 6895374008
[2025-11-26 08:48:28] 2025-11-26 13:48:27,973 [wrapper] cleanup supervisor_pilot 1229535 2118907
[2025-11-26 08:48:28] 2025-11-26 13:48:27,977 [wrapper] Test setup, not cleaning
[2025-11-26 08:48:28] 2025-11-26 13:48:27,981 [wrapper] apfmon messages muted
[2025-11-26 08:48:28] 2025-11-26 13:48:27,989 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:48:28] 2025-11-26 13:48:27,992 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:48:28]  *** Error codes and diagnostics ***
[2025-11-26 08:48:28]     "exeErrorCode": 0,
[2025-11-26 08:48:28]     "exeErrorDiag": "",
[2025-11-26 08:48:28]     "pilotErrorCode": 0,
[2025-11-26 08:48:28]     "pilotErrorDiag": "",
[2025-11-26 08:48:28]  *** Listing of results directory ***
[2025-11-26 08:48:28] total 1728080
[2025-11-26 08:48:28] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:41 queuedata.json
[2025-11-26 08:48:28] -rwx------. 1 boincer umatlas     36292 Nov 23 17:42 runpilot2-wrapper.sh
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:48:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:15 run_atlas
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:15 job.xml
[2025-11-26 08:48:28] -rw-r--r--. 3 boincer umatlas 412104557 Nov 25 00:15 EVNT.47483658._000930.pool.root.1
[2025-11-26 08:48:28] -rw-r--r--. 3 boincer umatlas 412104557 Nov 25 00:15 ATLAS.root_0
[2025-11-26 08:48:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:15 shared
[2025-11-26 08:48:28] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:15 input.tar.gz
[2025-11-26 08:48:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:15 start_atlas.sh
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:15 boinc_lockfile
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 16:00 pandaJob.out
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas        57 Nov 25 16:00 setup.sh.local
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas    991893 Nov 25 16:00 agis_schedconf.cvmfs.json
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:37 boinc_task_state.xml
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas 921580416 Nov 26 08:46 HITS.47556137._009166.pool.root.1
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas      1067 Nov 26 08:47 memory_monitor_summary.json
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 08:47 init_data.xml
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas   2243921 Nov 26 08:47 log.47556137._009166.job.log.tgz.1
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas        96 Nov 26 08:47 pilot_heartbeat.json
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas      8637 Nov 26 08:47 heartbeat.json
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:48 wrapper_checkpoint.txt
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:48 boinc_mmap_file
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas      4824 Nov 26 08:48 pilotlog.txt
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas   7673290 Nov 26 08:48 log.47556137._009166.job.log.1
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas       353 Nov 26 08:48 output.list
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:48 runtime_log
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas   9932800 Nov 26 08:48 result.tar.gz
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas       915 Nov 26 08:48 tcyKDmsxXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5nIKDmQlUr8n.diag
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas      9433 Nov 26 08:48 runtime_log.err
[2025-11-26 08:48:28] -rw-r--r--. 1 boincer umatlas     25696 Nov 26 08:48 stderr.txt
[2025-11-26 08:48:28] HITS file was successfully produced:
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas 921580416 Nov 26 08:46 shared/HITS.pool.root.1
[2025-11-26 08:48:28]  *** Contents of shared directory: ***
[2025-11-26 08:48:28] total 1312736
[2025-11-26 08:48:28] -rw-r--r--. 3 boincer umatlas 412104557 Nov 25 00:15 ATLAS.root_0
[2025-11-26 08:48:28] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:15 input.tar.gz
[2025-11-26 08:48:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:15 start_atlas.sh
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas 921580416 Nov 26 08:46 HITS.pool.root.1
[2025-11-26 08:48:28] -rw-------. 1 boincer umatlas   9932800 Nov 26 08:48 result.tar.gz
08:48:30 (2100232): run_atlas exited; CPU time 235449.335155
08:48:30 (2100232): called boinc_finish(0)

</stderr_txt>
]]>

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