Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:01 (3433): wrapper (7.7.26015): starting
15:50:01 (3433): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 15:50:01] Arguments: --nthreads 8
[2025-11-24 15:50:01] Threads: 8
[2025-11-24 15:50:01] Checking for CVMFS
[2025-11-24 15:50:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:50:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:50:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:50:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:50:02] 2.11.2.0 2756 70923 87076 153258 3 81 14140994 20275201 1 130560 0 21581421 99.905 3452040 30550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 15:50:02] CVMFS is ok
[2025-11-24 15:50:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:50:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:50:02] Further information can be found at the LHC@home message board.
[2025-11-24 15:50:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:50:02] Checking for apptainer binary...
[2025-11-24 15:50:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:50:02] Running /usr/bin/apptainer --version
[2025-11-24 15:50:02] apptainer version 1.3.2-1.el7
[2025-11-24 15:50:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:50:03] c-115-14.aglt2.org
[2025-11-24 15:50:03] apptainer works
[2025-11-24 15:50:03] Set ATHENA_PROC_NUMBER=8
[2025-11-24 15:50:03] Set ATHENA_CORE_NUMBER=8
[2025-11-24 15:50:03] Starting ATLAS job with PandaID=6895361254
[2025-11-24 15:50:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 03:02:32]  *** The last 200 lines of the pilot log: ***
[2025-11-25 03:02:32] 2025-11-25 08:01:24,538 | INFO     | time since job start (40264s) is within the limit (172800.0s)
[2025-11-25 03:02:32] 2025-11-25 08:01:26,488 | INFO     | monitor loop #2969: job 0:6895361254 is in state 'finished'
[2025-11-25 03:02:32] 2025-11-25 08:01:26,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 03:02:32] 2025-11-25 08:01:26,544 | INFO     | time since job start (40266s) is within the limit (172800.0s)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,304 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 03:02:32] 2025-11-25 08:01:28,307 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-25 03:02:32] 2025-11-25 08:01:28,309 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895361254/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,311 | INFO     | extracted standard info from prmon json
[2025-11-25 03:02:32] 2025-11-25 08:01:28,311 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 03:02:32] 2025-11-25 08:01:28,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 03:02:32] 2025-11-25 08:01:28,321 | INFO     | fitting pss+swap vs Time
[2025-11-25 03:02:32] 2025-11-25 08:01:28,322 | INFO     | sum of square deviations: 89147722180.5623
[2025-11-25 03:02:32] 2025-11-25 08:01:28,330 | INFO     | sum of deviations: 685992651833.9738
[2025-11-25 03:02:32] 2025-11-25 08:01:28,330 | INFO     | mean x: 1764037550.1257577
[2025-11-25 03:02:32] 2025-11-25 08:01:28,331 | INFO     | mean y: 3029475.3015151517
[2025-11-25 03:02:32] 2025-11-25 08:01:28,331 | INFO     | intersect: -13571257868.737072
[2025-11-25 03:02:32] 2025-11-25 08:01:28,331 | INFO     | chi2: 5.97119325609277
[2025-11-25 03:02:32] 2025-11-25 08:01:28,332 | INFO     | sum of square deviations: 87137075558.58925
[2025-11-25 03:02:32] 2025-11-25 08:01:28,340 | INFO     | sum of deviations: 911677130469.7273
[2025-11-25 03:02:32] 2025-11-25 08:01:28,341 | INFO     | mean x: 1764037397.6305344
[2025-11-25 03:02:32] 2025-11-25 08:01:28,341 | INFO     | mean y: 3046579.833587786
[2025-11-25 03:02:32] 2025-11-25 08:01:28,341 | INFO     | intersect: -18453305580.295395
[2025-11-25 03:02:32] 2025-11-25 08:01:28,341 | INFO     | chi2: 2.929656742545334
[2025-11-25 03:02:32] 2025-11-25 08:01:28,342 | INFO     | current chi2=2.929656742545334 (change=50.93682925843962 %)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,342 | INFO     | sum of square deviations: 85156854913.3553
[2025-11-25 03:02:32] 2025-11-25 08:01:28,351 | INFO     | sum of deviations: 965804581308.4333
[2025-11-25 03:02:32] 2025-11-25 08:01:28,351 | INFO     | mean x: 1764037245.133846
[2025-11-25 03:02:32] 2025-11-25 08:01:28,351 | INFO     | mean y: 3050733.0984615386
[2025-11-25 03:02:32] 2025-11-25 08:01:28,351 | INFO     | intersect: -20003738558.05677
[2025-11-25 03:02:32] 2025-11-25 08:01:28,352 | INFO     | chi2: 2.5567588878852496
[2025-11-25 03:02:32] 2025-11-25 08:01:28,352 | INFO     | current chi2=2.5567588878852496 (change=12.728380401865943 %)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,352 | INFO     | right removable region: 649
[2025-11-25 03:02:32] 2025-11-25 08:01:28,353 | INFO     | sum of square deviations: 87136823628.58931
[2025-11-25 03:02:32] 2025-11-25 08:01:28,361 | INFO     | sum of deviations: 490117174854.3209
[2025-11-25 03:02:32] 2025-11-25 08:01:28,361 | INFO     | mean x: 1764037702.6305344
[2025-11-25 03:02:32] 2025-11-25 08:01:28,361 | INFO     | mean y: 3044302.0839694655
[2025-11-25 03:02:32] 2025-11-25 08:01:28,361 | INFO     | intersect: -9919111901.761366
[2025-11-25 03:02:32] 2025-11-25 08:01:28,362 | INFO     | chi2: 3.5669056408032724
[2025-11-25 03:02:32] 2025-11-25 08:01:28,362 | INFO     | current chi2=3.5669056408032724 (change=40.26477643871695 %)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,363 | INFO     | sum of square deviations: 85156510751.88475
[2025-11-25 03:02:32] 2025-11-25 08:01:28,371 | INFO     | sum of deviations: 451288929538.49176
[2025-11-25 03:02:32] 2025-11-25 08:01:28,371 | INFO     | mean x: 1764037855.1307693
[2025-11-25 03:02:32] 2025-11-25 08:01:28,371 | INFO     | mean y: 3047290.1353846155
[2025-11-25 03:02:32] 2025-11-25 08:01:28,371 | INFO     | intersect: -9345512770.373224
[2025-11-25 03:02:32] 2025-11-25 08:01:28,372 | INFO     | chi2: 3.528613302494218
[2025-11-25 03:02:32] 2025-11-25 08:01:28,372 | INFO     | current chi2=3.528613302494218 (change=1.0735450321705406 %)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,372 | INFO     | left removable region: 20
[2025-11-25 03:02:32] 2025-11-25 08:01:28,373 | INFO     | sum of square deviations: 77166762800.51521
[2025-11-25 03:02:32] 2025-11-25 08:01:28,380 | INFO     | sum of deviations: 685410035121.4014
[2025-11-25 03:02:32] 2025-11-25 08:01:28,381 | INFO     | mean x: 1764037824.6422894
[2025-11-25 03:02:32] 2025-11-25 08:01:28,381 | INFO     | mean y: 3072430.5262321145
[2025-11-25 03:02:32] 2025-11-25 08:01:28,381 | INFO     | intersect: -15665450952.645668
[2025-11-25 03:02:32] 2025-11-25 08:01:28,382 | INFO     | chi2: 0.07788478974392576
[2025-11-25 03:02:32] 2025-11-25 08:01:28,382 | INFO     | current memory leak: 8.88 B/s (using 629 data points, chi2=0.08)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,382 | INFO     | could have reported an average CPU frequency of 2376 MHz (26 samples)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,382 | INFO     | ..............................
[2025-11-25 03:02:32] 2025-11-25 08:01:28,382 | INFO     | . Timing measurements:
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . get job = 0 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . initial setup = 2 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . payload setup = 8 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . stage-in = 0 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . payload execution = 40227 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . stage-out = 3 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | . log creation = 0 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,383 | INFO     | ..............................
[2025-11-25 03:02:32] 2025-11-25 08:01:28,463 | INFO     | 
[2025-11-25 03:02:32] 2025-11-25 08:01:28,464 | INFO     | job summary report
[2025-11-25 03:02:32] 2025-11-25 08:01:28,464 | INFO     | --------------------------------------------------
[2025-11-25 03:02:32] 2025-11-25 08:01:28,464 | INFO     | PanDA job id: 6895361254
[2025-11-25 03:02:32] 2025-11-25 08:01:28,464 | INFO     | task id: 47556137
[2025-11-25 03:02:32] 2025-11-25 08:01:28,464 | INFO     | errors: (none)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | pilot state: finished 
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | transexitcode: 0
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | exeerrorcode: 0
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | exeerrordiag: 
[2025-11-25 03:02:32] 2025-11-25 08:01:28,465 | INFO     | exitcode: 0
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | exitmsg: OK
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | cpuconsumptiontime: 312805 s
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | nevents: 1000
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | neventsw: 0
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | pid: 15536
[2025-11-25 03:02:32] 2025-11-25 08:01:28,466 | INFO     | pgrp: 15536
[2025-11-25 03:02:32] 2025-11-25 08:01:28,467 | INFO     | corecount: 8
[2025-11-25 03:02:32] 2025-11-25 08:01:28,467 | INFO     | event service: False
[2025-11-25 03:02:32] 2025-11-25 08:01:28,467 | INFO     | sizes: {0: 2284082, 1: 2284337, 6: 2284599, 12: 2284627, 40239: 2328361, 40243: 2337355, 40246: 2337539, 40252: 2337785}
[2025-11-25 03:02:32] 2025-11-25 08:01:28,467 | INFO     | --------------------------------------------------
[2025-11-25 03:02:32] 2025-11-25 08:01:28,467 | INFO     | 
[2025-11-25 03:02:32] 2025-11-25 08:01:28,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 03:02:32] 2025-11-25 08:01:28,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 03:02:32] 2025-11-25 08:01:28,502 | INFO     | job 6895361254 has completed (purged errors)
[2025-11-25 03:02:32] 2025-11-25 08:01:28,502 | INFO     | overall cleanup function is called
[2025-11-25 03:02:32] 2025-11-25 08:01:29,518 | INFO     | --- collectZombieJob: --- 10, [15536]
[2025-11-25 03:02:32] 2025-11-25 08:01:29,518 | INFO     | zombie collector waiting for pid 15536
[2025-11-25 03:02:32] 2025-11-25 08:01:29,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 03:02:32] 2025-11-25 08:01:29,518 | INFO     | collected zombie processes
[2025-11-25 03:02:32] 2025-11-25 08:01:29,518 | INFO     | will attempt to kill all subprocesses of pid=15536
[2025-11-25 03:02:32] 2025-11-25 08:01:29,602 | INFO     | process IDs to be killed: [15536] (in reverse order)
[2025-11-25 03:02:32] 2025-11-25 08:01:29,665 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 03:02:32] 2025-11-25 08:01:29,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 03:02:32] 2025-11-25 08:01:29,670 | INFO     | did not find any defunct processes belonging to 15536
[2025-11-25 03:02:32] 2025-11-25 08:01:29,673 | INFO     | did not find any defunct processes belonging to 15536
[2025-11-25 03:02:32] 2025-11-25 08:01:29,676 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 03:02:32] 2025-11-25 08:01:29,676 | INFO     | ready for new job
[2025-11-25 03:02:32] 2025-11-25 08:01:29,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 03:02:32] 2025-11-25 08:01:29,679 | INFO     | ***************************************
[2025-11-25 03:02:32] 2025-11-25 08:01:29,679 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 03:02:32] 2025-11-25 08:01:29,679 | INFO     | ***************************************
[2025-11-25 03:02:32] 2025-11-25 08:01:29,679 | INFO     | 
[2025-11-25 03:02:32] 2025-11-25 08:01:29,680 | INFO     | architecture information:
[2025-11-25 03:02:32] 2025-11-25 08:01:29,681 | INFO     | executing command: cat /etc/os-release
[2025-11-25 03:02:32] 2025-11-25 08:01:29,702 | INFO     | cat /etc/os-release:
[2025-11-25 03:02:32] NAME="CentOS Linux"
[2025-11-25 03:02:32] VERSION="7 (Core)"
[2025-11-25 03:02:32] ID="centos"
[2025-11-25 03:02:32] ID_LIKE="rhel fedora"
[2025-11-25 03:02:32] VERSION_ID="7"
[2025-11-25 03:02:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 03:02:32] ANSI_COLOR="0;31"
[2025-11-25 03:02:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 03:02:32] HOME_URL="https://www.centos.org/"
[2025-11-25 03:02:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 03:02:32] 
[2025-11-25 03:02:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 03:02:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 03:02:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 03:02:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 03:02:32] 
[2025-11-25 03:02:32] 2025-11-25 08:01:29,702 | INFO     | ***************************************
[2025-11-25 03:02:32] 2025-11-25 08:01:30,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 03:02:32] 2025-11-25 08:01:30,224 | INFO     | sufficient remaining disk space (17474519040 B)
[2025-11-25 03:02:32] 2025-11-25 08:01:30,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 03:02:32] 2025-11-25 08:01:30,225 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 03:02:32] 2025-11-25 08:01:30,225 | INFO     | update_server=False
[2025-11-25 03:02:32] 2025-11-25 08:01:30,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 03:02:32] 2025-11-25 08:01:30,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:02:32] 2025-11-25 08:01:30,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:02:32] 2025-11-25 08:01:30,227 | INFO     | aborting loop
[2025-11-25 03:02:32] 2025-11-25 08:01:30,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 03:02:32] 2025-11-25 08:01:30,915 | INFO     | all data control threads have been joined
[2025-11-25 03:02:32] 2025-11-25 08:01:31,192 | INFO     | all job control threads have been joined
[2025-11-25 03:02:32] 2025-11-25 08:01:31,231 | INFO     | [job] retrieve thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:31,232 | INFO     | [job] queue monitor thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:31,232 | INFO     | [job] job monitor thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:31,512 | INFO     | [payload] validate_post thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:31,658 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:31,708 | INFO     | all payload control threads have been joined
[2025-11-25 03:02:32] 2025-11-25 08:01:31,921 | INFO     | [data] control thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,090 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,197 | INFO     | [job] control thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,234 | INFO     | [payload] failed_post thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,338 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,359 | INFO     | [data] copytool_in thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,373 | INFO     | [data] copytool_out thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,373 | INFO     | [job] validate thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:32,710 | INFO     | [payload] control thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:33,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 03:02:32] 2025-11-25 08:01:37,239 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 03:02:32] 2025-11-25 08:01:59,661 | INFO     | PID=8246 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 03:02:32] 2025-11-25 08:01:59,661 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 03:02:32] 2025-11-25 08:01:59,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 03:02:32] 2025-11-25 08:01:59,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 03:02:32] 2025-11-25 08:02:26,336 | INFO     | [monitor] cgroup control has ended
[2025-11-25 03:02:32] 2025-11-25 08:02:27,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284502771520)>', '<ExcThread(monitor, started 140283647858432)>']
[2025-11-25 03:02:32] 2025-11-25 08:02:27,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 03:02:32] 2025-11-25 08:02:27,798 | INFO     | [monitor] control thread has ended
[2025-11-25 03:02:32] 2025-11-25 08:02:32,414 | INFO     | all workflow threads have been joined
[2025-11-25 03:02:32] 2025-11-25 08:02:32,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 03:02:32] 2025-11-25 08:02:32,415 | INFO     | traces error code: 0
[2025-11-25 03:02:32] 2025-11-25 08:02:32,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 03:02:32] 2025-11-25 08:02:32,536 [wrapper] ==== pilot stdout END ====
[2025-11-25 03:02:32] 2025-11-25 08:02:32,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 03:02:32] 2025-11-25 08:02:32,545 [wrapper] pilotpid: 8246
[2025-11-25 03:02:32] 2025-11-25 08:02:32,550 [wrapper] Pilot exit status: 0
[2025-11-25 03:02:32] 2025-11-25 08:02:32,567 [wrapper] pandaids: 6895361254
[2025-11-25 03:02:32] 2025-11-25 08:02:32,619 [wrapper] cleanup supervisor_pilot 10396 8247
[2025-11-25 03:02:32] 2025-11-25 08:02:32,623 [wrapper] Test setup, not cleaning
[2025-11-25 03:02:32] 2025-11-25 08:02:32,628 [wrapper] apfmon messages muted
[2025-11-25 03:02:32] 2025-11-25 08:02:32,633 [wrapper] ==== wrapper stdout END ====
[2025-11-25 03:02:32] 2025-11-25 08:02:32,638 [wrapper] ==== wrapper stderr END ====
[2025-11-25 03:02:32]  *** Error codes and diagnostics ***
[2025-11-25 03:02:32]     "exeErrorCode": 0,
[2025-11-25 03:02:32]     "exeErrorDiag": "",
[2025-11-25 03:02:32]     "pilotErrorCode": 0,
[2025-11-25 03:02:32]     "pilotErrorDiag": "",
[2025-11-25 03:02:32]  *** Listing of results directory ***
[2025-11-25 03:02:32] total 1312612
[2025-11-25 03:02:32] -rwx------ 1 boincer umatlas     36292 Nov 23 09:16 runpilot2-wrapper.sh
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 09:16 queuedata.json
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 09:16 pilot3.tar.gz
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas       100 Nov 24 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 03:02:32] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 15:49 run_atlas
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas       105 Nov 24 15:49 job.xml
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas 409822887 Nov 24 15:50 EVNT.47483658._000761.pool.root.1
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:50 start_atlas.sh
[2025-11-25 03:02:32] drwxrwx--x 2 boincer umatlas      4096 Nov 24 15:50 shared
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 15:50 input.tar.gz
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas         0 Nov 24 15:50 boinc_lockfile
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 15:50 pandaJob.out
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas        57 Nov 24 15:50 setup.sh.local
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas    991801 Nov 24 15:50 agis_schedconf.cvmfs.json
[2025-11-25 03:02:32] drwx------ 5 boincer umatlas      4096 Nov 24 15:50 pilot3
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas       533 Nov 25 02:52 boinc_task_state.xml
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas      5912 Nov 25 03:00 init_data.xml
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas 915435618 Nov 25 03:00 HITS.47556137._007570.pool.root.1
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas      1063 Nov 25 03:01 memory_monitor_summary.json
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas   1516227 Nov 25 03:01 agis_ddmendpoints.agis.ALL.json
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas   1909884 Nov 25 03:01 log.47556137._007570.job.log.tgz.1
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas      8659 Nov 25 03:01 heartbeat.json
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas        95 Nov 25 03:01 pilot_heartbeat.json
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas        29 Nov 25 03:02 wrapper_checkpoint.txt
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 03:02 boinc_mmap_file
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas      4745 Nov 25 03:02 pilotlog.txt
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas   5554802 Nov 25 03:02 log.47556137._007570.job.log.1
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas       353 Nov 25 03:02 output.list
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas       620 Nov 25 03:02 runtime_log
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas   7485440 Nov 25 03:02 result.tar.gz
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 03:02 runtime_log.err
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas       668 Nov 25 03:02 qSvNDma4Ph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1xKKDmiyIfWn.diag
[2025-11-25 03:02:32] -rw-r--r-- 1 boincer umatlas     21307 Nov 25 03:02 stderr.txt
[2025-11-25 03:02:32] HITS file was successfully produced:
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas 915435618 Nov 25 03:00 shared/HITS.pool.root.1
[2025-11-25 03:02:32]  *** Contents of shared directory: ***
[2025-11-25 03:02:32] total 1302116
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas 409822887 Nov 24 15:50 ATLAS.root_0
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:50 start_atlas.sh
[2025-11-25 03:02:32] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 15:50 input.tar.gz
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas 915435618 Nov 25 03:00 HITS.pool.root.1
[2025-11-25 03:02:32] -rw------- 1 boincer umatlas   7485440 Nov 25 03:02 result.tar.gz
03:02:33 (3433): run_atlas exited; CPU time 310768.450878
03:02:33 (3433): called boinc_finish(0)

</stderr_txt>
]]>

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