Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 16:08:35 (1546080): vboxwrapper version 26210
2025-11-25 16:08:35 (1546080): BOINC client version: 7.18.1
2025-11-25 16:08:37 (1546080): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-25 16:08:37 (1546080): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 16:08:37 (1546080): Create VM. (boinc_dc2119465b82258b, slot#2)
2025-11-25 16:08:41 (1546080): Setting Memory Size for VM. (4700MB)
2025-11-25 16:08:42 (1546080): Setting CPU Count for VM. (7)
2025-11-25 16:08:42 (1546080): Setting Chipset Options for VM.
2025-11-25 16:08:42 (1546080): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 16:08:42 (1546080): Setting Boot Options for VM.
2025-11-25 16:08:42 (1546080): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 16:08:42 (1546080): Enabling VM Network Access.
2025-11-25 16:08:42 (1546080): Disabling USB Support for VM.
2025-11-25 16:08:42 (1546080): Disabling COM Port Support for VM.
2025-11-25 16:08:42 (1546080): Disabling LPT Port Support for VM.
2025-11-25 16:08:42 (1546080): Disabling Audio Support for VM.
2025-11-25 16:08:42 (1546080): Disabling Clipboard Support for VM.
2025-11-25 16:08:42 (1546080): Disabling Drag and Drop Support for VM.
2025-11-25 16:08:42 (1546080): Adding storage controller(s) to VM.
2025-11-25 16:08:42 (1546080): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 16:08:42 (1546080): Adding VirtualBox Guest Additions to VM.
2025-11-25 16:08:42 (1546080): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 16:08:43 (1546080): forwarding host port 59961 to guest port 80
2025-11-25 16:08:43 (1546080): Enabling remote desktop for VM.
2025-11-25 16:08:43 (1546080): Required extension pack not installed, remote desktop not enabled.
2025-11-25 16:08:43 (1546080): Enabling shared directory for VM.
2025-11-25 16:08:43 (1546080): Starting VM using VBoxManage interface. (boinc_dc2119465b82258b, slot#2)
2025-11-25 16:08:44 (1546080): Successfully started VM. (PID = '1547048')
2025-11-25 16:08:44 (1546080): Reporting VM Process ID to BOINC.
2025-11-25 16:08:44 (1546080): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-25 16:08:44 (1546080): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 16:08:44 (1546080): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 16:08:44 (1546080): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 16:08:44 (1546080): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 16:08:44 (1546080): Detected: Web Application Enabled (http://localhost:59961)
2025-11-25 16:08:44 (1546080): Preference change detected
2025-11-25 16:08:44 (1546080): Setting CPU throttle for VM. (90%)
2025-11-25 16:08:44 (1546080): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 16:08:46 (1546080): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 16:08:46 (1546080): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 16:08:48 (1546080): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 16:08:48 (1546080): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 16:08:48 (1546080): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 16:08:55 (1546080): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 16:08:55 (1546080): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-25 16:08:59 (1546080): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000170 main     Log opened 2025-11-25T14:08:57.425722000Z
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000292 main     OS Product: Linux
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000332 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000363 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000419 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000420 main     Process ID: 1351
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.000421 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 16:08:59 (1546080): Guest Log: 00:00:00.001184 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 16:08:59 (1546080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 16:08:59 (1546080): Guest Log: [INFO] Mounting shared directory
2025-11-25 16:09:00 (1546080): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 16:16:56 (1546080): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 16:16:56 (1546080): Guest Log: [INFO] Detected branch: prod
2025-11-25 16:16:56 (1546080): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 16:16:56 (1546080): Guest Log: Copying input files
2025-11-25 16:16:58 (1546080): Guest Log: Copied input files into RunAtlas.
2025-11-25 16:16:58 (1546080): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-11-25 16:17:06 (1546080): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 16:17:06 (1546080): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 16:17:06 (1546080): Guest Log: 2.6.3.0 1774 2 29580 153285 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-11-25 16:17:12 (1546080): Guest Log: copied the webapp to /var/www
2025-11-25 16:17:12 (1546080): Guest Log: ATHENA_PROC_NUMBER=7
2025-11-25 16:17:12 (1546080): Guest Log: ATHENA_CORE_NUMBER=7
2025-11-25 16:17:12 (1546080): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 16:17:12 (1546080): Guest Log:  *** Starting ATLAS job. (PandaID=6895374236 taskID=47556137) ***
2025-11-25 16:40:18 (1546080): Guest Log:  *** Job finished ***
2025-11-25 16:40:18 (1546080): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:02,225 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:04,241 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:06,268 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:08,271 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:10,274 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:12,277 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:14,397 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140208991737664)>', '<ExcThread(queue_monitor, started 140208326567680)>']
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,317 [wrapper] The pilot process (6240) is still running after 3m. Sending SIGKILL (9).
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,341 [wrapper] The pilot process (6240) is still running after 3m. Sending SIGKILL (9).
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,410 [wrapper] ==== pilot stdout END ====
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,431 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,451 [wrapper] pilotpid: 6240
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,473 [wrapper] Pilot exit status: 137
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,538 [wrapper] pandaids: 6895374236
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,553 [wrapper] Found: wrapper_sigkill_6240, so killed by wrapper
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,595 [wrapper] No supervise_pilot CHILD process found
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,599 [wrapper] Test setup, not cleaning
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,603 [wrapper] apfmon messages muted
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,607 [wrapper] ==== wrapper stdout END ====
2025-11-25 16:40:18 (1546080): Guest Log: 2025-11-25 14:40:15,615 [wrapper] ==== wrapper stderr END ====
2025-11-25 16:40:18 (1546080): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 16:40:18 (1546080): Guest Log:     "exeErrorCode": 65,
2025-11-25 16:40:18 (1546080): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2025-11-25 16:40:18 (1546080): Guest Log:     "pilotErrorCode": 1305,
2025-11-25 16:40:18 (1546080): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2025-11-25 16:40:18 (1546080): Guest Log:  *** Listing of results directory ***
2025-11-25 16:40:18 (1546080): Guest Log: total 4420
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas  576529 Nov 23 22:35 pilot3.tar.gz
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Nov 23 22:43 queuedata.json
2025-11-25 16:40:18 (1546080): Guest Log: -rwx------. 1 atlas atlas   36292 Nov 23 22:45 runpilot2-wrapper.sh
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas    7501 Nov 25 14:16 init_data.xml
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas  590105 Nov 25 14:16 input.tar.gz
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas   15847 Nov 25 14:16 start_atlas.sh
2025-11-25 16:40:18 (1546080): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Nov 25 14:16 EVNT.47483658._000933.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas    2786 Nov 25 14:17 pandaJob.out
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas      69 Nov 25 14:17 setup.sh.local
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas  991909 Nov 25 14:21 agis_schedconf.cvmfs.json
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas 1516240 Nov 25 14:21 agis_ddmendpoints.agis.ALL.json
2025-11-25 16:40:18 (1546080): Guest Log: drwx------. 5 atlas atlas    4096 Nov 25 14:21 pilot3
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas    1010 Nov 25 14:27 memory_monitor_summary.json
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas   50328 Nov 25 14:29 log.47556137._009194.job.log.tgz.1
2025-11-25 16:40:18 (1546080): Guest Log: drwxrwx---. 2 atlas atlas    4096 Nov 25 14:29 PanDA_Pilot-6895374236
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas      95 Nov 25 14:36 pilot_heartbeat.json
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas       0 Nov 25 14:37 wrapper_sigint_6240
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas    8874 Nov 25 14:39 heartbeat.json
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas  186343 Nov 25 14:40 pilotlog.txt
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas       0 Nov 25 14:40 wrapper_sigkill_6240
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas  198592 Nov 25 14:40 log.47556137._009194.job.log.1
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas     186 Nov 25 14:40 output.list
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas     620 Nov 25 14:40 runtime_log
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas  266240 Nov 25 14:40 result.tar.gz
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 atlas atlas    9235 Nov 25 14:40 runtime_log.err
2025-11-25 16:40:18 (1546080): Guest Log: -rw-------. 1 atlas atlas     663 Nov 25 14:40 iQAODmW0Xh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMoIKDmKd3lrn.diag
2025-11-25 16:40:18 (1546080): Guest Log: Looking for outputfile HITS.47556137._009194.pool.root.1
2025-11-25 16:40:18 (1546080): Guest Log: No HITS file was produced
2025-11-25 16:40:18 (1546080): Guest Log: Successfully finished the ATLAS job!
2025-11-25 16:40:18 (1546080): Guest Log: Copying the results back to the shared directory!
2025-11-25 16:40:18 (1546080): Guest Log:  *** Contents of shared directory: ***
2025-11-25 16:40:18 (1546080): Guest Log: total 401032
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 root root 409789323 Nov 25 14:08 ATLAS.root_0
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 root root      7501 Nov 25 14:08 init_data.xml
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 root root    590105 Nov 25 14:08 input.tar.gz
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 root root    266240 Nov 25  2025 result.tar.gz
2025-11-25 16:40:18 (1546080): Guest Log: -rw-r--r--. 1 root root     15847 Nov 25 14:08 start_atlas.sh
2025-11-25 16:40:18 (1546080): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 16:40:18 (1546080): VM Completion File Detected.
2025-11-25 16:40:18 (1546080): Powering off VM.
2025-11-25 16:40:18 (1546080): Successfully stopped VM.
2025-11-25 16:40:18 (1546080): Deregistering VM. (boinc_dc2119465b82258b, slot#2)
2025-11-25 16:40:18 (1546080): Removing network bandwidth throttle group from VM.
2025-11-25 16:40:18 (1546080): Removing VM from VirtualBox.
2025-11-25 16:40:23 (1546080): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN