Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:13:43 (38801): wrapper (7.7.26015): starting
17:13:43 (38801): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:13:43] Arguments: --nthreads 8
[2025-11-24 17:13:43] Threads: 8
[2025-11-24 17:13:43] Checking for CVMFS
[2025-11-24 17:13:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:13:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:13:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:13:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:13:43] 2.11.2.0 5808 168077 107976 153260 2 49 15002221 18432000 2801 130560 0 110969345 99.944 8930273 6924 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-24 17:13:43] CVMFS is ok
[2025-11-24 17:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:13:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:13:43] Further information can be found at the LHC@home message board.
[2025-11-24 17:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:13:43] Checking for apptainer binary...
[2025-11-24 17:13:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:13:43] Running /usr/bin/apptainer --version
[2025-11-24 17:13:43] apptainer version 1.3.2-1.el7
[2025-11-24 17:13:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:13:44] c-9-34.aglt2.org
[2025-11-24 17:13:44] apptainer works
[2025-11-24 17:13:44] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:13:44] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:13:44] Starting ATLAS job with PandaID=6895358560
[2025-11-24 17:13:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:30:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:30:47] 2025-11-25 15:29:56,939 | INFO     | monitor loop #4297: job 0:6895358560 is in state 'finished'
[2025-11-25 10:30:47] 2025-11-25 15:29:56,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,176 | INFO     | time since job start (62160s) is within the limit (172800.0s)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,748 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 10:30:47] 2025-11-25 15:29:57,756 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9069687500014
[2025-11-25 10:30:47] 2025-11-25 15:29:57,762 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895358560/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,763 | INFO     | extracted standard info from prmon json
[2025-11-25 10:30:47] 2025-11-25 15:29:57,763 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:30:47] 2025-11-25 15:29:57,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:30:47] 2025-11-25 15:29:57,789 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:30:47] 2025-11-25 15:29:57,791 | INFO     | sum of square deviations: 328094039650.51544
[2025-11-25 10:30:47] 2025-11-25 15:29:57,823 | INFO     | sum of deviations: 1663852609323.3994
[2025-11-25 10:30:47] 2025-11-25 15:29:57,823 | INFO     | mean x: 1764053513.6604514
[2025-11-25 10:30:47] 2025-11-25 15:29:57,823 | INFO     | mean y: 2855830.7468105988
[2025-11-25 10:30:47] 2025-11-25 15:29:57,823 | INFO     | intersect: -8943131255.201284
[2025-11-25 10:30:47] 2025-11-25 15:29:57,825 | INFO     | chi2: 5.912344929159244
[2025-11-25 10:30:47] 2025-11-25 15:29:57,826 | INFO     | sum of square deviations: 323288229220.82446
[2025-11-25 10:30:47] 2025-11-25 15:29:57,858 | INFO     | sum of deviations: 1981710964698.8948
[2025-11-25 10:30:47] 2025-11-25 15:29:57,859 | INFO     | mean x: 1764053361.163708
[2025-11-25 10:30:47] 2025-11-25 15:29:57,859 | INFO     | mean y: 2865911.9644970414
[2025-11-25 10:30:47] 2025-11-25 15:29:57,859 | INFO     | intersect: -10810530841.012232
[2025-11-25 10:30:47] 2025-11-25 15:29:57,860 | INFO     | chi2: 3.020255041062451
[2025-11-25 10:30:47] 2025-11-25 15:29:57,860 | INFO     | current chi2=3.020255041062451 (change=48.916122498760544 %)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,862 | INFO     | sum of square deviations: 318529582466.1103
[2025-11-25 10:30:47] 2025-11-25 15:29:57,894 | INFO     | sum of deviations: 2133632684453.057
[2025-11-25 10:30:47] 2025-11-25 15:29:57,894 | INFO     | mean x: 1764053208.666997
[2025-11-25 10:30:47] 2025-11-25 15:29:57,894 | INFO     | mean y: 2870779.82160555
[2025-11-25 10:30:47] 2025-11-25 15:29:57,894 | INFO     | intersect: -11813430720.296186
[2025-11-25 10:30:47] 2025-11-25 15:29:57,896 | INFO     | chi2: 2.2704765745120015
[2025-11-25 10:30:47] 2025-11-25 15:29:57,896 | INFO     | current chi2=2.2704765745120015 (change=24.825005052775147 %)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,896 | INFO     | right removable region: 1008
[2025-11-25 10:30:47] 2025-11-25 15:29:57,897 | INFO     | sum of square deviations: 323287880606.1512
[2025-11-25 10:30:47] 2025-11-25 15:29:57,929 | INFO     | sum of deviations: 1426606891758.3699
[2025-11-25 10:30:47] 2025-11-25 15:29:57,929 | INFO     | mean x: 1764053666.1627219
[2025-11-25 10:30:47] 2025-11-25 15:29:57,929 | INFO     | mean y: 2863347.258382643
[2025-11-25 10:30:47] 2025-11-25 15:29:57,930 | INFO     | intersect: -7781564305.460358
[2025-11-25 10:30:47] 2025-11-25 15:29:57,931 | INFO     | chi2: 4.138296724404908
[2025-11-25 10:30:47] 2025-11-25 15:29:57,931 | INFO     | current chi2=4.138296724404908 (change=30.005830613922107 %)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,932 | INFO     | sum of square deviations: 318528946969.10504
[2025-11-25 10:30:47] 2025-11-25 15:29:57,964 | INFO     | sum of deviations: 1344789469722.3413
[2025-11-25 10:30:47] 2025-11-25 15:29:57,964 | INFO     | mean x: 1764053818.6640239
[2025-11-25 10:30:47] 2025-11-25 15:29:57,964 | INFO     | mean y: 2865968.753221011
[2025-11-25 10:30:47] 2025-11-25 15:29:57,964 | INFO     | intersect: -7444749144.20842
[2025-11-25 10:30:47] 2025-11-25 15:29:57,966 | INFO     | chi2: 4.043099936515335
[2025-11-25 10:30:47] 2025-11-25 15:29:57,966 | INFO     | current chi2=4.043099936515335 (change=2.3003857439261357 %)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,966 | INFO     | left removable region: 20
[2025-11-25 10:30:47] 2025-11-25 15:29:57,967 | INFO     | sum of square deviations: 299052014792.09186
[2025-11-25 10:30:47] 2025-11-25 15:29:57,986 | INFO     | sum of deviations: 1718999757896.919
[2025-11-25 10:30:47] 2025-11-25 15:29:57,986 | INFO     | mean x: 1764053788.1710527
[2025-11-25 10:30:47] 2025-11-25 15:29:57,986 | INFO     | mean y: 2885855.710526316
[2025-11-25 10:30:47] 2025-11-25 15:29:57,986 | INFO     | intersect: -10137183044.649117
[2025-11-25 10:30:47] 2025-11-25 15:29:57,987 | INFO     | chi2: 0.2322700720208831
[2025-11-25 10:30:47] 2025-11-25 15:29:57,987 | INFO     | current memory leak: 5.75 B/s (using 988 data points, chi2=0.23)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | ..............................
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . Timing measurements:
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . get job = 0 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . initial setup = 2 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . payload setup = 5 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . stage-in = 0 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . payload execution = 62123 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,988 | INFO     | . stage-out = 3 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,989 | INFO     | . log creation = 0 s
[2025-11-25 10:30:47] 2025-11-25 15:29:57,989 | INFO     | ..............................
[2025-11-25 10:30:47] 2025-11-25 15:29:58,621 | INFO     | 
[2025-11-25 10:30:47] 2025-11-25 15:29:58,621 | INFO     | job summary report
[2025-11-25 10:30:47] 2025-11-25 15:29:58,621 | INFO     | --------------------------------------------------
[2025-11-25 10:30:47] 2025-11-25 15:29:58,621 | INFO     | PanDA job id: 6895358560
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | task id: 47556137
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | errors: (none)
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | pilot state: finished 
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | transexitcode: 0
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | exeerrorcode: 0
[2025-11-25 10:30:47] 2025-11-25 15:29:58,622 | INFO     | exeerrordiag: 
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | exitcode: 0
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | exitmsg: OK
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | cpuconsumptiontime: 474957 s
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | nevents: 1000
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | neventsw: 0
[2025-11-25 10:30:47] 2025-11-25 15:29:58,623 | INFO     | pid: 3552
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | pgrp: 3552
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | corecount: 8
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | event service: False
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | sizes: {0: 2284083, 1: 2284338, 5: 2284600, 12: 2284656, 62133: 2337545, 62137: 2346544, 62140: 2346728, 62146: 2346974}
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | --------------------------------------------------
[2025-11-25 10:30:47] 2025-11-25 15:29:58,624 | INFO     | 
[2025-11-25 10:30:47] 2025-11-25 15:29:58,625 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 10:30:47] 2025-11-25 15:29:58,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:30:47] 2025-11-25 15:29:58,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:30:47] 2025-11-25 15:29:58,645 | INFO     | job 6895358560 has completed (purged errors)
[2025-11-25 10:30:47] 2025-11-25 15:29:58,646 | INFO     | overall cleanup function is called
[2025-11-25 10:30:47] 2025-11-25 15:29:59,662 | INFO     | --- collectZombieJob: --- 10, [3552]
[2025-11-25 10:30:47] 2025-11-25 15:29:59,662 | INFO     | zombie collector waiting for pid 3552
[2025-11-25 10:30:47] 2025-11-25 15:29:59,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:30:47] 2025-11-25 15:29:59,662 | INFO     | collected zombie processes
[2025-11-25 10:30:47] 2025-11-25 15:29:59,663 | INFO     | will attempt to kill all subprocesses of pid=3552
[2025-11-25 10:30:47] 2025-11-25 15:29:59,941 | INFO     | process IDs to be killed: [3552] (in reverse order)
[2025-11-25 10:30:47] 2025-11-25 15:30:00,048 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:30:47] 2025-11-25 15:30:00,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:30:47] 2025-11-25 15:30:00,060 | INFO     | did not find any defunct processes belonging to 3552
[2025-11-25 10:30:47] 2025-11-25 15:30:00,070 | INFO     | did not find any defunct processes belonging to 3552
[2025-11-25 10:30:47] 2025-11-25 15:30:00,072 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:30:47] 2025-11-25 15:30:00,072 | INFO     | ready for new job
[2025-11-25 10:30:47] 2025-11-25 15:30:00,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:30:47] 2025-11-25 15:30:00,077 | INFO     | ***************************************
[2025-11-25 10:30:47] 2025-11-25 15:30:00,077 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:30:47] 2025-11-25 15:30:00,077 | INFO     | ***************************************
[2025-11-25 10:30:47] 2025-11-25 15:30:00,078 | INFO     | 
[2025-11-25 10:30:47] 2025-11-25 15:30:00,079 | INFO     | architecture information:
[2025-11-25 10:30:47] 2025-11-25 15:30:00,080 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:30:47] 2025-11-25 15:30:00,092 | INFO     | cat /etc/os-release:
[2025-11-25 10:30:47] NAME="CentOS Linux"
[2025-11-25 10:30:47] VERSION="7 (Core)"
[2025-11-25 10:30:47] ID="centos"
[2025-11-25 10:30:47] ID_LIKE="rhel fedora"
[2025-11-25 10:30:47] VERSION_ID="7"
[2025-11-25 10:30:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:30:47] ANSI_COLOR="0;31"
[2025-11-25 10:30:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:30:47] HOME_URL="https://www.centos.org/"
[2025-11-25 10:30:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:30:47] 
[2025-11-25 10:30:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:30:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:30:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:30:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:30:47] 
[2025-11-25 10:30:47] 2025-11-25 15:30:00,092 | INFO     | ***************************************
[2025-11-25 10:30:47] 2025-11-25 15:30:00,594 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 10:30:47] 2025-11-25 15:30:00,609 | INFO     | sufficient remaining disk space (102022250496 B)
[2025-11-25 10:30:47] 2025-11-25 15:30:00,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:30:47] 2025-11-25 15:30:00,609 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:30:47] 2025-11-25 15:30:00,609 | INFO     | update_server=False
[2025-11-25 10:30:47] 2025-11-25 15:30:00,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:30:47] 2025-11-25 15:30:00,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:30:47] 2025-11-25 15:30:00,610 | INFO     | aborting loop
[2025-11-25 10:30:47] 2025-11-25 15:30:00,703 | INFO     | all payload control threads have been joined
[2025-11-25 10:30:47] 2025-11-25 15:30:01,459 | INFO     | all data control threads have been joined
[2025-11-25 10:30:47] 2025-11-25 15:30:01,463 | INFO     | all job control threads have been joined
[2025-11-25 10:30:47] 2025-11-25 15:30:01,614 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:01,615 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:01,709 | INFO     | [payload] control thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:01,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:01,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:30:47] 2025-11-25 15:30:02,194 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,339 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,464 | INFO     | [data] control thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,468 | INFO     | [job] control thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,601 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,605 | INFO     | [job] validate thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,649 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,649 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,712 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:02,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:30:47] 2025-11-25 15:30:03,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:30:47] 2025-11-25 15:30:03,938 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:04,148 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:06,939 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:30:47] 2025-11-25 15:30:30,572 | INFO     | PID=44121 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 10:30:47] 2025-11-25 15:30:30,572 | INFO     | .. there are 4 such processes running
[2025-11-25 10:30:47] 2025-11-25 15:30:30,572 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:30:47] 2025-11-25 15:30:30,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:30:47] 2025-11-25 15:30:30,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:30:47] 2025-11-25 15:30:41,106 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:30:47] 2025-11-25 15:30:42,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270774015808)>', '<ExcThread(monitor, started 140270049937152)>']
[2025-11-25 10:30:47] 2025-11-25 15:30:42,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:30:47] 2025-11-25 15:30:42,637 | INFO     | [monitor] control thread has ended
[2025-11-25 10:30:47] 2025-11-25 15:30:47,460 | INFO     | all workflow threads have been joined
[2025-11-25 10:30:47] 2025-11-25 15:30:47,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:30:47] 2025-11-25 15:30:47,461 | INFO     | traces error code: 0
[2025-11-25 10:30:47] 2025-11-25 15:30:47,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:30:47] 2025-11-25 15:30:47,583 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:30:47] 2025-11-25 15:30:47,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:30:47] 2025-11-25 15:30:47,592 [wrapper] pilotpid: 44121
[2025-11-25 10:30:47] 2025-11-25 15:30:47,594 [wrapper] Pilot exit status: 0
[2025-11-25 10:30:47] 2025-11-25 15:30:47,613 [wrapper] pandaids: 6895358560
[2025-11-25 10:30:47] 2025-11-25 15:30:47,683 [wrapper] cleanup supervisor_pilot 47996 44122
[2025-11-25 10:30:47] 2025-11-25 15:30:47,685 [wrapper] Test setup, not cleaning
[2025-11-25 10:30:47] 2025-11-25 15:30:47,692 [wrapper] apfmon messages muted
[2025-11-25 10:30:47] 2025-11-25 15:30:47,694 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:30:47] 2025-11-25 15:30:47,696 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:30:47]  *** Error codes and diagnostics ***
[2025-11-25 10:30:47]     "exeErrorCode": 0,
[2025-11-25 10:30:47]     "exeErrorDiag": "",
[2025-11-25 10:30:47]     "pilotErrorCode": 0,
[2025-11-25 10:30:47]     "pilotErrorDiag": "",
[2025-11-25 10:30:47]  *** Listing of results directory ***
[2025-11-25 10:30:47] total 1322792
[2025-11-25 10:30:47] -rwx------ 1 boincer umatlas     36292 Nov 23 07:50 runpilot2-wrapper.sh
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 07:50 queuedata.json
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:50 pilot3.tar.gz
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas       100 Nov 24 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:30:47] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 17:13 run_atlas
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas       105 Nov 24 17:13 job.xml
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas 410124967 Nov 24 17:13 EVNT.47483658._000733.pool.root.1
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:13 start_atlas.sh
[2025-11-25 10:30:47] drwxrwx--x 2 boincer umatlas      4096 Nov 24 17:13 shared
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas    590091 Nov 24 17:13 input.tar.gz
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas         0 Nov 24 17:13 boinc_lockfile
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 17:13 pandaJob.out
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas        57 Nov 24 17:13 setup.sh.local
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas    991801 Nov 24 17:13 agis_schedconf.cvmfs.json
[2025-11-25 10:30:47] drwx------ 5 boincer umatlas      4096 Nov 24 17:13 pilot3
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas       533 Nov 25 10:15 boinc_task_state.xml
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas 919102453 Nov 25 10:29 HITS.47556137._007283.pool.root.1
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas      6038 Nov 25 10:29 init_data.xml
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas      1076 Nov 25 10:29 memory_monitor_summary.json
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas        95 Nov 25 10:29 pilot_heartbeat.json
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas   1516240 Nov 25 10:29 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas   2219460 Nov 25 10:29 log.47556137._007283.job.log.tgz.1
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas      8659 Nov 25 10:29 heartbeat.json
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 10:30 boinc_mmap_file
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas        29 Nov 25 10:30 wrapper_checkpoint.txt
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas      4822 Nov 25 10:30 pilotlog.txt
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas   8476456 Nov 25 10:30 log.47556137._007283.job.log.1
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas       353 Nov 25 10:30 output.list
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas       620 Nov 25 10:30 runtime_log
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas  10711040 Nov 25 10:30 result.tar.gz
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas      9333 Nov 25 10:30 runtime_log.err
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas       665 Nov 25 10:30 DCoLDmpiOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxtKKDmb3Uxun.diag
[2025-11-25 10:30:47] -rw-r--r-- 1 boincer umatlas     21300 Nov 25 10:30 stderr.txt
[2025-11-25 10:30:47] HITS file was successfully produced:
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas 919102453 Nov 25 10:29 shared/HITS.pool.root.1
[2025-11-25 10:30:47]  *** Contents of shared directory: ***
[2025-11-25 10:30:47] total 1309144
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas 410124967 Nov 24 17:13 ATLAS.root_0
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:13 start_atlas.sh
[2025-11-25 10:30:47] -rw-r--r-- 2 boincer umatlas    590091 Nov 24 17:13 input.tar.gz
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas 919102453 Nov 25 10:29 HITS.pool.root.1
[2025-11-25 10:30:47] -rw------- 1 boincer umatlas  10711040 Nov 25 10:30 result.tar.gz
10:30:49 (38801): run_atlas exited; CPU time 475297.377382
10:30:49 (38801): called boinc_finish(0)

</stderr_txt>
]]>

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