Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:24:09 (3435): wrapper (7.7.26015): starting
01:24:09 (3435): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:24:09] Arguments: --nthreads 8
[2025-11-27 01:24:09] Threads: 8
[2025-11-27 01:24:09] Checking for CVMFS
[2025-11-27 01:24:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:24:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:24:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:24:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:24:11] 2.11.2.0 13026 286050 137088 153341 3 84 14525128 25165825 1288 130560 10 138995365 99.881 80050606 3113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 01:24:11] CVMFS is ok
[2025-11-27 01:24:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:24:11] Checking for apptainer binary...
[2025-11-27 01:24:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:24:11] Running /usr/bin/apptainer --version
[2025-11-27 01:24:11] apptainer version 1.3.2-1.el7
[2025-11-27 01:24:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:24:28] cg-vwn329.simple-grid.lan
[2025-11-27 01:24:28] apptainer works
[2025-11-27 01:24:28] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:24:28] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:24:28] Starting ATLAS job with PandaID=6893849673
[2025-11-27 01:24:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:56:53]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:56:53] 2025-11-27 23:56:04,637 | INFO     | time since job start (84475s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:05,262 | INFO     | monitor loop #5687: job 0:6893849673 is in state 'finished'
[2025-11-28 00:56:53] 2025-11-27 23:56:05,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:56:53] 2025-11-27 23:56:06,643 | INFO     | time since job start (84477s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:07,768 | INFO     | monitor loop #5688: job 0:6893849673 is in state 'finished'
[2025-11-28 00:56:53] 2025-11-27 23:56:07,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:56:53] 2025-11-27 23:56:08,651 | INFO     | time since job start (84479s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:10,273 | INFO     | monitor loop #5689: job 0:6893849673 is in state 'finished'
[2025-11-28 00:56:53] 2025-11-27 23:56:10,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:56:53] 2025-11-27 23:56:10,659 | INFO     | time since job start (84481s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:12,667 | INFO     | time since job start (84483s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:12,779 | INFO     | monitor loop #5690: job 0:6893849673 is in state 'finished'
[2025-11-28 00:56:53] 2025-11-27 23:56:12,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:56:53] 2025-11-27 23:56:14,674 | INFO     | time since job start (84485s) is within the limit (172800.0s)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,290 | INFO     | monitor loop #5691: job 0:6893849673 is in state 'finished'
[2025-11-28 00:56:53] 2025-11-27 23:56:15,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,532 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:56:53] 2025-11-27 23:56:15,533 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 00:56:53] 2025-11-27 23:56:15,535 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6893849673/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,536 | INFO     | extracted standard info from prmon json
[2025-11-28 00:56:53] 2025-11-27 23:56:15,536 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:56:53] 2025-11-27 23:56:15,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:56:53] 2025-11-27 23:56:15,571 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:56:53] 2025-11-27 23:56:15,574 | INFO     | sum of square deviations: 806095161684.9819
[2025-11-28 00:56:53] 2025-11-27 23:56:15,655 | INFO     | sum of deviations: 3638178212049.3403
[2025-11-28 00:56:53] 2025-11-27 23:56:15,655 | INFO     | mean x: 1764245725.0763636
[2025-11-28 00:56:53] 2025-11-27 23:56:15,655 | INFO     | mean y: 2837679.834909091
[2025-11-28 00:56:53] 2025-11-27 23:56:15,655 | INFO     | intersect: -7959795843.801584
[2025-11-28 00:56:53] 2025-11-27 23:56:15,657 | INFO     | chi2: 23.874067339918536
[2025-11-28 00:56:53] 2025-11-27 23:56:15,659 | INFO     | sum of square deviations: 797333783681.6672
[2025-11-28 00:56:53] 2025-11-27 23:56:15,717 | INFO     | sum of deviations: 4101224431117.0205
[2025-11-28 00:56:53] 2025-11-27 23:56:15,717 | INFO     | mean x: 1764245572.580292
[2025-11-28 00:56:53] 2025-11-27 23:56:15,717 | INFO     | mean y: 2845739.0452554743
[2025-11-28 00:56:53] 2025-11-27 23:56:15,717 | INFO     | intersect: -9071856967.450253
[2025-11-28 00:56:53] 2025-11-27 23:56:15,719 | INFO     | chi2: 20.58758517491059
[2025-11-28 00:56:53] 2025-11-27 23:56:15,719 | INFO     | current chi2=20.58758517491059 (change=13.765908080156905 %)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,719 | INFO     | right removable region: 1369
[2025-11-28 00:56:53] 2025-11-27 23:56:15,721 | INFO     | sum of square deviations: 797332880881.6677
[2025-11-28 00:56:53] 2025-11-27 23:56:15,781 | INFO     | sum of deviations: 3058827674681.1514
[2025-11-28 00:56:53] 2025-11-27 23:56:15,782 | INFO     | mean x: 1764245877.580292
[2025-11-28 00:56:53] 2025-11-27 23:56:15,782 | INFO     | mean y: 2847762.6576642334
[2025-11-28 00:56:53] 2025-11-27 23:56:15,782 | INFO     | intersect: -6765371941.661328
[2025-11-28 00:56:53] 2025-11-27 23:56:15,784 | INFO     | chi2: 19.041884398508813
[2025-11-28 00:56:53] 2025-11-27 23:56:15,784 | INFO     | current chi2=19.041884398508813 (change=20.240300375336933 %)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,784 | INFO     | left removable region: 10
[2025-11-28 00:56:53] 2025-11-27 23:56:15,786 | INFO     | sum of square deviations: 778280920906.2272
[2025-11-28 00:56:53] 2025-11-27 23:56:15,843 | INFO     | sum of deviations: 3113213074271.3604
[2025-11-28 00:56:53] 2025-11-27 23:56:15,844 | INFO     | mean x: 1764245847.089036
[2025-11-28 00:56:53] 2025-11-27 23:56:15,844 | INFO     | mean y: 2867086.5011037528
[2025-11-28 00:56:53] 2025-11-27 23:56:15,844 | INFO     | intersect: -7054318937.012263
[2025-11-28 00:56:53] 2025-11-27 23:56:15,846 | INFO     | chi2: 10.965089473837136
[2025-11-28 00:56:53] 2025-11-27 23:56:15,846 | INFO     | current memory leak: 4.00 B/s (using 1359 data points, chi2=10.97)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,847 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | ..............................
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . Timing measurements:
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . get job = 0 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . initial setup = 2 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . payload setup = 157 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . stage-in = 0 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . payload execution = 84029 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . stage-out = 5 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | . log creation = 2 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,848 | INFO     | ..............................
[2025-11-28 00:56:53] 2025-11-27 23:56:15,993 | INFO     | 
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | job summary report
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | --------------------------------------------------
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | PanDA job id: 6893849673
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | task id: 47523449
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | errors: (none)
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:56:53] 2025-11-27 23:56:15,994 | INFO     | pilot state: finished 
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | transexitcode: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | exeerrorcode: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | exeerrordiag: 
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | exitcode: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | exitmsg: OK
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | cpuconsumptiontime: 316206 s
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | nevents: 1000
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | neventsw: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | pid: 13816
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | pgrp: 13816
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | corecount: 8
[2025-11-28 00:56:53] 2025-11-27 23:56:15,995 | INFO     | event service: False
[2025-11-28 00:56:53] 2025-11-27 23:56:15,996 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 34: 2284399, 45: 2284427, 55: 2284583, 66: 2284611, 77: 2284639, 87: 2284695, 96: 2284985, 98: 2285293, 8
[2025-11-28 00:56:53] 2025-11-27 23:56:15,996 | INFO     | --------------------------------------------------
[2025-11-28 00:56:53] 2025-11-27 23:56:15,996 | INFO     | 
[2025-11-28 00:56:53] 2025-11-27 23:56:15,996 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-28 00:56:53] 2025-11-27 23:56:16,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | job 6893849673 has completed (purged errors)
[2025-11-28 00:56:53] 2025-11-27 23:56:16,495 | INFO     | overall cleanup function is called
[2025-11-28 00:56:53] 2025-11-27 23:56:17,512 | INFO     | --- collectZombieJob: --- 10, [13816]
[2025-11-28 00:56:53] 2025-11-27 23:56:17,513 | INFO     | zombie collector waiting for pid 13816
[2025-11-28 00:56:53] 2025-11-27 23:56:17,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:56:53] 2025-11-27 23:56:17,513 | INFO     | collected zombie processes
[2025-11-28 00:56:53] 2025-11-27 23:56:17,513 | INFO     | will attempt to kill all subprocesses of pid=13816
[2025-11-28 00:56:53] 2025-11-27 23:56:17,641 | INFO     | process IDs to be killed: [13816] (in reverse order)
[2025-11-28 00:56:53] 2025-11-27 23:56:18,552 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:56:53] 2025-11-27 23:56:18,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:56:53] 2025-11-27 23:56:18,555 | INFO     | did not find any defunct processes belonging to 13816
[2025-11-28 00:56:53] 2025-11-27 23:56:18,558 | INFO     | did not find any defunct processes belonging to 13816
[2025-11-28 00:56:53] 2025-11-27 23:56:18,561 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:56:53] 2025-11-27 23:56:18,562 | INFO     | ready for new job
[2025-11-28 00:56:53] 2025-11-27 23:56:18,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:56:53] 2025-11-27 23:56:18,567 | INFO     | ***************************************
[2025-11-28 00:56:53] 2025-11-27 23:56:18,567 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:56:53] 2025-11-27 23:56:18,567 | INFO     | ***************************************
[2025-11-28 00:56:53] 2025-11-27 23:56:18,567 | INFO     | 
[2025-11-28 00:56:53] 2025-11-27 23:56:18,568 | INFO     | pilot is running in a VM
[2025-11-28 00:56:53] 2025-11-27 23:56:18,568 | INFO     | architecture information:
[2025-11-28 00:56:53] 2025-11-27 23:56:18,572 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:56:53] 2025-11-27 23:56:18,712 | INFO     | cat /etc/os-release:
[2025-11-28 00:56:53] NAME="CentOS Linux"
[2025-11-28 00:56:53] VERSION="7 (Core)"
[2025-11-28 00:56:53] ID="centos"
[2025-11-28 00:56:53] ID_LIKE="rhel fedora"
[2025-11-28 00:56:53] VERSION_ID="7"
[2025-11-28 00:56:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:56:53] ANSI_COLOR="0;31"
[2025-11-28 00:56:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:56:53] HOME_URL="https://www.centos.org/"
[2025-11-28 00:56:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:56:53] 
[2025-11-28 00:56:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:56:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:56:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:56:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:56:53] 
[2025-11-28 00:56:53] 2025-11-27 23:56:18,712 | INFO     | ***************************************
[2025-11-28 00:56:53] 2025-11-27 23:56:19,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-28 00:56:53] 2025-11-27 23:56:19,467 | INFO     | sufficient remaining disk space (495292776448 B)
[2025-11-28 00:56:53] 2025-11-27 23:56:19,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:56:53] 2025-11-27 23:56:19,468 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:56:53] 2025-11-27 23:56:19,468 | INFO     | update_server=False
[2025-11-28 00:56:53] 2025-11-27 23:56:19,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:56:53] 2025-11-27 23:56:19,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:56:53] 2025-11-27 23:56:19,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:56:53] 2025-11-27 23:56:19,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:56:53] 2025-11-27 23:56:19,472 | INFO     | aborting loop
[2025-11-28 00:56:53] 2025-11-27 23:56:19,974 | INFO     | all payload control threads have been joined
[2025-11-28 00:56:53] 2025-11-27 23:56:20,308 | INFO     | all data control threads have been joined
[2025-11-28 00:56:53] 2025-11-27 23:56:20,474 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,477 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,587 | INFO     | all job control threads have been joined
[2025-11-28 00:56:53] 2025-11-27 23:56:20,702 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,769 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,974 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,981 | INFO     | [payload] control thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:20,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:56:53] 2025-11-27 23:56:21,022 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,042 | INFO     | [job] validate thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,314 | INFO     | [data] control thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,475 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,594 | INFO     | [job] control thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,807 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:21,991 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:23,478 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:56:53] 2025-11-27 23:56:36,074 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:56:53] 2025-11-27 23:56:37,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044232390464)>', '<ExcThread(monitor, started 140043716916992)>']
[2025-11-28 00:56:53] 2025-11-27 23:56:42,442 | INFO     | all workflow threads have been joined
[2025-11-28 00:56:53] 2025-11-27 23:56:42,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:56:53] 2025-11-27 23:56:42,443 | INFO     | traces error code: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:42,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:56:53] 2025-11-27 23:56:47,896 | INFO     | PID=7251 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 00:56:53] 2025-11-27 23:56:47,896 | INFO     | .. there are 9 such processes running
[2025-11-28 00:56:53] 2025-11-27 23:56:47,898 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:56:53] 2025-11-27 23:56:47,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:56:53] 2025-11-27 23:56:47,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:56:53] 2025-11-27 23:56:47,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:56:53] 2025-11-27 23:56:47,898 | INFO     | [monitor] control thread has ended
[2025-11-28 00:56:53] 2025-11-27 23:56:48,219 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:56:53] 2025-11-27 23:56:48,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:56:53] 2025-11-27 23:56:48,378 [wrapper] pilotpid: 7251
[2025-11-28 00:56:53] 2025-11-27 23:56:48,465 [wrapper] Pilot exit status: 0
[2025-11-28 00:56:53] 2025-11-27 23:56:48,866 [wrapper] pandaids: 6893849673
[2025-11-28 00:56:53] 2025-11-27 23:56:49,865 [wrapper] cleanup supervisor_pilot 16662 7252
[2025-11-28 00:56:53] 2025-11-27 23:56:49,956 [wrapper] Test setup, not cleaning
[2025-11-28 00:56:53] 2025-11-27 23:56:50,035 [wrapper] apfmon messages muted
[2025-11-28 00:56:53] 2025-11-27 23:56:50,092 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:56:53] 2025-11-27 23:56:50,189 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:56:53]  *** Error codes and diagnostics ***
[2025-11-28 00:56:53]     "exeErrorCode": 0,
[2025-11-28 00:56:53]     "exeErrorDiag": "",
[2025-11-28 00:56:53]     "pilotErrorCode": 0,
[2025-11-28 00:56:53]     "pilotErrorDiag": "",
[2025-11-28 00:56:53]  *** Listing of results directory ***
[2025-11-28 00:56:53] total 1328816
[2025-11-28 00:56:53] -rwx------. 1 boinc boinc     36292 Nov 20 12:00 runpilot2-wrapper.sh
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:00 queuedata.json
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:00 pilot3.tar.gz
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc       100 Nov 27 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:56:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 01:24 run_atlas
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc       105 Nov 27 01:24 job.xml
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc 409465711 Nov 27 01:24 EVNT.47493127._000298.pool.root.1
[2025-11-28 00:56:53] drwxrwx--x. 2 boinc boinc        68 Nov 27 01:24 shared
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc    590098 Nov 27 01:24 input.tar.gz
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc      6391 Nov 27 01:24 init_data.xml
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:24 start_atlas.sh
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc         0 Nov 27 01:24 boinc_lockfile
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc      2786 Nov 27 01:24 pandaJob.out
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc    991546 Nov 27 01:28 agis_schedconf.cvmfs.json
[2025-11-28 00:56:53] drwx------. 5 boinc boinc      4096 Nov 27 01:28 pilot3
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:33 boinc_task_state.xml
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc 919868505 Nov 28 00:53 HITS.47523449._002980.pool.root.1
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc      1027 Nov 28 00:54 memory_monitor_summary.json
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc   1516240 Nov 28 00:54 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc   2471392 Nov 28 00:54 log.47523449._002980.job.log.tgz.1
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc      7265 Nov 28 00:56 heartbeat.json
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc      8192 Nov 28 00:56 boinc_mmap_file
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc        29 Nov 28 00:56 wrapper_checkpoint.txt
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc        95 Nov 28 00:56 pilot_heartbeat.json
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc       819 Nov 28 00:56 pilotlog.txt
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc  11265574 Nov 28 00:56 log.47523449._002980.job.log.1
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc       353 Nov 28 00:56 output.list
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc       620 Nov 28 00:56 runtime_log
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc  13752320 Nov 28 00:56 result.tar.gz
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc      8817 Nov 28 00:56 runtime_log.err
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc       662 Nov 28 00:56 nsmKDmdZHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYUGKDmtFeOSn.diag
[2025-11-28 00:56:53] -rw-r--r--. 1 boinc boinc     21380 Nov 28 00:56 stderr.txt
[2025-11-28 00:56:53] HITS file was successfully produced:
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc 919868505 Nov 28 00:53 shared/HITS.pool.root.1
[2025-11-28 00:56:53]  *** Contents of shared directory: ***
[2025-11-28 00:56:53] total 1312212
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc 409465711 Nov 27 01:24 ATLAS.root_0
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc    590098 Nov 27 01:24 input.tar.gz
[2025-11-28 00:56:53] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:24 start_atlas.sh
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc 919868505 Nov 28 00:53 HITS.pool.root.1
[2025-11-28 00:56:53] -rw-------. 1 boinc boinc  13752320 Nov 28 00:56 result.tar.gz
00:56:54 (3435): run_atlas exited; CPU time 316784.004920
00:56:54 (3435): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN