Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:41:38 (1583752): wrapper (7.7.26015): starting
23:41:38 (1583752): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:41:38] Arguments: --nthreads 8
[2025-11-24 23:41:38] Threads: 8
[2025-11-24 23:41:38] Checking for CVMFS
[2025-11-24 23:41:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:41:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:41:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:41:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:41:40] 2.13.2.0 8058 33932 293500 153270 1 325 23426319 40960000 11203 16776704 0 34942389 99.720 24069525 35432 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:41:40] CVMFS is ok
[2025-11-24 23:41:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:41:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:41:40] Further information can be found at the LHC@home message board.
[2025-11-24 23:41:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:41:40] Checking for apptainer binary...
[2025-11-24 23:41:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:41:40] Running /usr/bin/apptainer --version
[2025-11-24 23:41:40] apptainer version 1.4.4-1.el9
[2025-11-24 23:41:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:41:41] c-210-33-3.aglt2.org
[2025-11-24 23:41:41] apptainer works
[2025-11-24 23:41:41] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:41:41] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:41:41] Starting ATLAS job with PandaID=6895373289
[2025-11-24 23:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:17:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:17:37] 2025-11-26 16:16:55,630 | INFO     | time since job start (128067s) is within the limit (172800.0s)
[2025-11-26 11:17:37] 2025-11-26 16:16:57,636 | INFO     | time since job start (128069s) is within the limit (172800.0s)
[2025-11-26 11:17:37] 2025-11-26 16:16:57,637 | INFO     | monitor loop #7565: job 0:6895373289 is in state 'finished'
[2025-11-26 11:17:37] 2025-11-26 16:16:57,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:17:37] 2025-11-26 16:16:59,643 | INFO     | time since job start (128071s) is within the limit (172800.0s)
[2025-11-26 11:17:37] 2025-11-26 16:17:00,166 | INFO     | monitor loop #7566: job 0:6895373289 is in state 'finished'
[2025-11-26 11:17:37] 2025-11-26 16:17:00,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,113 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 11:17:37] 2025-11-26 16:17:01,130 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2745.6189999999997
[2025-11-26 11:17:37] 2025-11-26 16:17:01,144 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895373289/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,144 | INFO     | extracted standard info from prmon json
[2025-11-26 11:17:37] 2025-11-26 16:17:01,145 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:17:37] 2025-11-26 16:17:01,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:17:37] 2025-11-26 16:17:01,213 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:17:37] 2025-11-26 16:17:01,216 | INFO     | sum of square deviations: 2863169527029.5215
[2025-11-26 11:17:37] 2025-11-26 16:17:01,351 | INFO     | sum of deviations: 10645457731090.262
[2025-11-26 11:17:37] 2025-11-26 16:17:01,351 | INFO     | mean x: 1764109827.8017159
[2025-11-26 11:17:37] 2025-11-26 16:17:01,351 | INFO     | mean y: 2920113.325071497
[2025-11-26 11:17:37] 2025-11-26 16:17:01,352 | INFO     | intersect: -6556159405.919355
[2025-11-26 11:17:37] 2025-11-26 16:17:01,355 | INFO     | chi2: 13.5231020778217
[2025-11-26 11:17:37] 2025-11-26 16:17:01,358 | INFO     | sum of square deviations: 2842749353032.978
[2025-11-26 11:17:37] 2025-11-26 16:17:01,496 | INFO     | sum of deviations: 11357706687526.795
[2025-11-26 11:17:37] 2025-11-26 16:17:01,496 | INFO     | mean x: 1764109675.31677
[2025-11-26 11:17:37] 2025-11-26 16:17:01,497 | INFO     | mean y: 2925431.7047300525
[2025-11-26 11:17:37] 2025-11-26 16:17:01,497 | INFO     | intersect: -7045265516.082838
[2025-11-26 11:17:37] 2025-11-26 16:17:01,503 | INFO     | chi2: 10.362593776633654
[2025-11-26 11:17:37] 2025-11-26 16:17:01,503 | INFO     | current chi2=10.362593776633654 (change=23.3711783213659 %)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,503 | INFO     | right removable region: 2092
[2025-11-26 11:17:37] 2025-11-26 16:17:01,506 | INFO     | sum of square deviations: 2842741288222.98
[2025-11-26 11:17:37] 2025-11-26 16:17:01,661 | INFO     | time since job start (128073s) is within the limit (172800.0s)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,662 | INFO     | sum of deviations: 9814617497785.463
[2025-11-26 11:17:37] 2025-11-26 16:17:01,662 | INFO     | mean x: 1764109980.31677
[2025-11-26 11:17:37] 2025-11-26 16:17:01,662 | INFO     | mean y: 2926315.8107978976
[2025-11-26 11:17:37] 2025-11-26 16:17:01,662 | INFO     | intersect: -6087696405.491463
[2025-11-26 11:17:37] 2025-11-26 16:17:01,669 | INFO     | chi2: 9.635558988785178
[2025-11-26 11:17:37] 2025-11-26 16:17:01,669 | INFO     | current chi2=9.635558988785178 (change=28.747421018230813 %)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,671 | INFO     | sum of square deviations: 2822411164691.959
[2025-11-26 11:17:37] 2025-11-26 16:17:01,740 | INFO     | sum of deviations: 9300833252275.928
[2025-11-26 11:17:37] 2025-11-26 16:17:01,741 | INFO     | mean x: 1764110132.829023
[2025-11-26 11:17:37] 2025-11-26 16:17:01,741 | INFO     | mean y: 2930168.268678161
[2025-11-26 11:17:37] 2025-11-26 16:17:01,741 | INFO     | intersect: -5810430545.914804
[2025-11-26 11:17:37] 2025-11-26 16:17:01,743 | INFO     | chi2: 8.120167125928324
[2025-11-26 11:17:37] 2025-11-26 16:17:01,743 | INFO     | current chi2=8.120167125928324 (change=15.727077843855428 %)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,743 | INFO     | left removable region: 20
[2025-11-26 11:17:37] 2025-11-26 16:17:01,745 | INFO     | sum of square deviations: 2758015901372.2915
[2025-11-26 11:17:37] 2025-11-26 16:17:01,929 | INFO     | sum of deviations: 9817834619571.271
[2025-11-26 11:17:37] 2025-11-26 16:17:01,974 | INFO     | mean x: 1764110254.8687258
[2025-11-26 11:17:37] 2025-11-26 16:17:01,974 | INFO     | mean y: 2939331.7326254826
[2025-11-26 11:17:37] 2025-11-26 16:17:01,974 | INFO     | intersect: -6276844162.036639
[2025-11-26 11:17:37] 2025-11-26 16:17:01,976 | INFO     | chi2: 4.097195844525139
[2025-11-26 11:17:37] 2025-11-26 16:17:01,981 | INFO     | current memory leak: 3.56 B/s (using 2072 data points, chi2=4.10)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,983 | INFO     | could have reported an average CPU frequency of 2775 MHz (73 samples)
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | ..............................
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . Timing measurements:
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . get job = 0 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . initial setup = 5 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . payload setup = 39 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . stage-in = 0 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,984 | INFO     | . payload execution = 127957 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,988 | INFO     | . stage-out = 6 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,989 | INFO     | . log creation = 2 s
[2025-11-26 11:17:37] 2025-11-26 16:17:01,989 | INFO     | ..............................
[2025-11-26 11:17:37] 2025-11-26 16:17:02,476 | INFO     | 
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | job summary report
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | --------------------------------------------------
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | PanDA job id: 6895373289
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | task id: 47556137
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | errors: (none)
[2025-11-26 11:17:37] 2025-11-26 16:17:02,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | pilot state: finished 
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | transexitcode: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | exeerrorcode: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | exeerrordiag: 
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | exitcode: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | exitmsg: OK
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | cpuconsumptiontime: 253688 s
[2025-11-26 11:17:37] 2025-11-26 16:17:02,479 | INFO     | nevents: 1000
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | neventsw: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | pid: 1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | pgrp: 1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | corecount: 8
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | event service: False
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | sizes: {0: 2284032, 1: 2284116, 2: 2284287, 12: 2284315, 23: 2284633, 128000: 2367921, 128001: 2368048, 128007: 2377159, 128028: 2377349}
[2025-11-26 11:17:37] 2025-11-26 16:17:02,480 | INFO     | --------------------------------------------------
[2025-11-26 11:17:37] 2025-11-26 16:17:02,507 | INFO     | 
[2025-11-26 11:17:37] 2025-11-26 16:17:02,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:17:37] 2025-11-26 16:17:02,630 | INFO     | job 6895373289 has completed (purged errors)
[2025-11-26 11:17:37] 2025-11-26 16:17:02,630 | INFO     | overall cleanup function is called
[2025-11-26 11:17:37] 2025-11-26 16:17:03,657 | INFO     | --- collectZombieJob: --- 10, [1604677]
[2025-11-26 11:17:37] 2025-11-26 16:17:03,658 | INFO     | zombie collector waiting for pid 1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:03,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:17:37] 2025-11-26 16:17:03,658 | INFO     | collected zombie processes
[2025-11-26 11:17:37] 2025-11-26 16:17:03,658 | INFO     | will attempt to kill all subprocesses of pid=1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:04,050 | INFO     | process IDs to be killed: [1604677] (in reverse order)
[2025-11-26 11:17:37] 2025-11-26 16:17:04,268 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:17:37] 2025-11-26 16:17:04,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:17:37] 2025-11-26 16:17:04,290 | INFO     | did not find any defunct processes belonging to 1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:04,307 | INFO     | did not find any defunct processes belonging to 1604677
[2025-11-26 11:17:37] 2025-11-26 16:17:04,316 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:17:37] 2025-11-26 16:17:04,316 | INFO     | ready for new job
[2025-11-26 11:17:37] 2025-11-26 16:17:04,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:17:37] 2025-11-26 16:17:04,332 | INFO     | ***************************************
[2025-11-26 11:17:37] 2025-11-26 16:17:04,333 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:17:37] 2025-11-26 16:17:04,333 | INFO     | ***************************************
[2025-11-26 11:17:37] 2025-11-26 16:17:04,333 | INFO     | 
[2025-11-26 11:17:37] 2025-11-26 16:17:04,336 | INFO     | architecture information:
[2025-11-26 11:17:37] 2025-11-26 16:17:04,340 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:17:37] 2025-11-26 16:17:04,383 | INFO     | cat /etc/os-release:
[2025-11-26 11:17:37] NAME="CentOS Linux"
[2025-11-26 11:17:37] VERSION="7 (Core)"
[2025-11-26 11:17:37] ID="centos"
[2025-11-26 11:17:37] ID_LIKE="rhel fedora"
[2025-11-26 11:17:37] VERSION_ID="7"
[2025-11-26 11:17:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:17:37] ANSI_COLOR="0;31"
[2025-11-26 11:17:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:17:37] HOME_URL="https://www.centos.org/"
[2025-11-26 11:17:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:17:37] 
[2025-11-26 11:17:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:17:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:17:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:17:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:17:37] 
[2025-11-26 11:17:37] 2025-11-26 16:17:04,383 | INFO     | ***************************************
[2025-11-26 11:17:37] 2025-11-26 16:17:04,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 11:17:37] 2025-11-26 16:17:04,928 | INFO     | sufficient remaining disk space (71091355648 B)
[2025-11-26 11:17:37] 2025-11-26 16:17:04,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:17:37] 2025-11-26 16:17:04,929 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:17:37] 2025-11-26 16:17:04,929 | INFO     | update_server=False
[2025-11-26 11:17:37] 2025-11-26 16:17:04,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:17:37] 2025-11-26 16:17:04,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:17:37] 2025-11-26 16:17:05,288 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 11:17:37] 2025-11-26 16:17:05,290 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 11:17:37] 2025-11-26 16:17:05,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:17:37] 2025-11-26 16:17:05,291 | INFO     | will abort loop
[2025-11-26 11:17:37] 2025-11-26 16:17:05,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:17:37] 2025-11-26 16:17:05,837 | INFO     | all data control threads have been joined
[2025-11-26 11:17:37] 2025-11-26 16:17:05,935 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,096 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,298 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,299 | INFO     | [job] validate thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,411 | INFO     | all job control threads have been joined
[2025-11-26 11:17:37] 2025-11-26 16:17:06,418 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,436 | INFO     | all payload control threads have been joined
[2025-11-26 11:17:37] 2025-11-26 16:17:06,458 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,462 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,843 | INFO     | [data] control thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,935 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:06,940 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:07,064 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:07,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:17:37] 2025-11-26 16:17:07,417 | INFO     | [job] control thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:07,442 | INFO     | [payload] control thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:08,225 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:09,346 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:17:37] 2025-11-26 16:17:23,058 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:17:37] 2025-11-26 16:17:23,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226158831424)>', '<ExcThread(monitor, started 140225808410368)>']
[2025-11-26 11:17:37] 2025-11-26 16:17:28,828 | INFO     | all workflow threads have been joined
[2025-11-26 11:17:37] 2025-11-26 16:17:28,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:17:37] 2025-11-26 16:17:28,829 | INFO     | traces error code: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:28,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:17:37] 2025-11-26 16:17:35,741 | INFO     | PID=1590842 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:17:37] 2025-11-26 16:17:35,741 | INFO     | .. there are 10 such processes running
[2025-11-26 11:17:37] 2025-11-26 16:17:35,742 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:17:37] 2025-11-26 16:17:35,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:17:37] 2025-11-26 16:17:35,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:17:37] 2025-11-26 16:17:35,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:17:37] 2025-11-26 16:17:35,742 | INFO     | [monitor] control thread has ended
[2025-11-26 11:17:37] 2025-11-26 16:17:36,012 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:17:37] 2025-11-26 16:17:36,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:17:37] 2025-11-26 16:17:36,084 [wrapper] pilotpid: 1590842
[2025-11-26 11:17:37] 2025-11-26 16:17:36,129 [wrapper] Pilot exit status: 0
[2025-11-26 11:17:37] 2025-11-26 16:17:36,226 [wrapper] pandaids: 6895373289
[2025-11-26 11:17:37] 2025-11-26 16:17:36,550 [wrapper] cleanup supervisor_pilot  558135 1590843
[2025-11-26 11:17:37] 2025-11-26 16:17:36,570 [wrapper] Test setup, not cleaning
[2025-11-26 11:17:37] 2025-11-26 16:17:36,586 [wrapper] apfmon messages muted
[2025-11-26 11:17:37] 2025-11-26 16:17:36,608 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:17:37] 2025-11-26 16:17:36,629 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:17:37]  *** Error codes and diagnostics ***
[2025-11-26 11:17:37]     "exeErrorCode": 0,
[2025-11-26 11:17:37]     "exeErrorDiag": "",
[2025-11-26 11:17:37]     "pilotErrorCode": 0,
[2025-11-26 11:17:37]     "pilotErrorDiag": "",
[2025-11-26 11:17:37]  *** Listing of results directory ***
[2025-11-26 11:17:37] total 1347160
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:35 queuedata.json
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-26 11:17:37] -rwx------. 1 boincer umatlas     36292 Nov 23 17:36 runpilot2-wrapper.sh
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas       100 Nov 24 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:17:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 23:41 run_atlas
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas       105 Nov 24 23:41 job.xml
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas 409505054 Nov 24 23:41 EVNT.47483658._000927.pool.root.1
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:41 start_atlas.sh
[2025-11-26 11:17:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 23:41 shared
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 23:41 input.tar.gz
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas         0 Nov 24 23:41 boinc_lockfile
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 23:41 pandaJob.out
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas        57 Nov 24 23:41 setup.sh.local
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas    991801 Nov 24 23:42 agis_schedconf.cvmfs.json
[2025-11-26 11:17:37] drwx------. 5 boincer umatlas      4096 Nov 24 23:42 pilot3
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:58 boinc_task_state.xml
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 11:11 init_data.xml
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas 928321062 Nov 26 11:15 HITS.47556137._009132.pool.root.1
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas      1070 Nov 26 11:16 memory_monitor_summary.json
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas   2901255 Nov 26 11:16 log.47556137._009132.job.log.tgz.1
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas      8666 Nov 26 11:17 heartbeat.json
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas        29 Nov 26 11:17 wrapper_checkpoint.txt
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas       823 Nov 26 11:17 pilotlog.txt
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas        95 Nov 26 11:17 pilot_heartbeat.json
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas  15970587 Nov 26 11:17 log.47556137._009132.job.log.1
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas       353 Nov 26 11:17 output.list
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas       620 Nov 26 11:17 runtime_log
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas  18892800 Nov 26 11:17 result.tar.gz
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:17 boinc_mmap_file
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 11:17 runtime_log.err
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas       669 Nov 26 11:17 EHhKDmtrXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcFLKDm8NRTqn.diag
[2025-11-26 11:17:37] -rw-r--r--. 1 boincer umatlas     21544 Nov 26 11:17 stderr.txt
[2025-11-26 11:17:37] HITS file was successfully produced:
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas 928321062 Nov 26 11:15 shared/HITS.pool.root.1
[2025-11-26 11:17:37]  *** Contents of shared directory: ***
[2025-11-26 11:17:37] total 1325528
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas 409505054 Nov 24 23:41 ATLAS.root_0
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:41 start_atlas.sh
[2025-11-26 11:17:37] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 23:41 input.tar.gz
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas 928321062 Nov 26 11:15 HITS.pool.root.1
[2025-11-26 11:17:37] -rw-------. 1 boincer umatlas  18892800 Nov 26 11:17 result.tar.gz
11:17:38 (1583752): run_atlas exited; CPU time 256063.339372
11:17:38 (1583752): called boinc_finish(0)

</stderr_txt>
]]>

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