Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:25:54 (10391): wrapper (7.7.26015): starting
15:25:54 (10391): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 15:25:54] Arguments: --nthreads 12
[2025-11-24 15:25:54] Threads: 12
[2025-11-24 15:25:54] Checking for CVMFS
[2025-11-24 15:25:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:25:55] 2.11.2.0 2987 285233 95956 153258 0 81 14799045 20275200 1 130560 1 128073899 99.967 16967813 14033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 15:25:55] CVMFS is ok
[2025-11-24 15:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:25:55] Further information can be found at the LHC@home message board.
[2025-11-24 15:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:25:55] Checking for apptainer binary...
[2025-11-24 15:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:25:55] Running /usr/bin/apptainer --version
[2025-11-24 15:25:55] apptainer version 1.3.2-1.el7
[2025-11-24 15:25:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:25:56] c-205-19.aglt2.org
[2025-11-24 15:25:56] apptainer works
[2025-11-24 15:25:56] Set ATHENA_PROC_NUMBER=12
[2025-11-24 15:25:56] Set ATHENA_CORE_NUMBER=12
[2025-11-24 15:25:56] Starting ATLAS job with PandaID=6895373296
[2025-11-24 15:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:25:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:25:57] 2025-11-25 03:25:18,616 | INFO     | 25149s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 22:25:57] 2025-11-25 03:25:18,742 | INFO     | monitor loop #1881: job 0:6895373296 is in state 'finished'
[2025-11-24 22:25:57] 2025-11-25 03:25:18,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,621 | INFO     | time since job start (25149s) is within the limit (172800.0s)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,774 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 22:25:57] 2025-11-25 03:25:20,779 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-24 22:25:57] 2025-11-25 03:25:20,782 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895373296/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,783 | INFO     | extracted standard info from prmon json
[2025-11-24 22:25:57] 2025-11-25 03:25:20,783 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:25:57] 2025-11-25 03:25:20,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:25:57] 2025-11-25 03:25:20,791 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:25:57] 2025-11-25 03:25:20,792 | INFO     | sum of square deviations: 21685407786.68927
[2025-11-24 22:25:57] 2025-11-25 03:25:20,796 | INFO     | sum of deviations: 332989242017.1843
[2025-11-24 22:25:57] 2025-11-25 03:25:20,796 | INFO     | mean x: 1764028535.762136
[2025-11-24 22:25:57] 2025-11-25 03:25:20,796 | INFO     | mean y: 3427777.5631067962
[2025-11-24 22:25:57] 2025-11-25 03:25:20,796 | INFO     | intersect: -27084028026.73452
[2025-11-24 22:25:57] 2025-11-25 03:25:20,796 | INFO     | chi2: 6.153998365517743
[2025-11-24 22:25:57] 2025-11-25 03:25:20,797 | INFO     | sum of square deviations: 20905463311.34148
[2025-11-24 22:25:57] 2025-11-25 03:25:20,800 | INFO     | sum of deviations: 494801876841.405
[2025-11-24 22:25:57] 2025-11-25 03:25:20,801 | INFO     | mean x: 1764028383.2653563
[2025-11-24 22:25:57] 2025-11-25 03:25:20,801 | INFO     | mean y: 3459392.135135135
[2025-11-24 22:25:57] 2025-11-25 03:25:20,801 | INFO     | intersect: -41748523897.69123
[2025-11-24 22:25:57] 2025-11-25 03:25:20,801 | INFO     | chi2: 2.9041103083014
[2025-11-24 22:25:57] 2025-11-25 03:25:20,801 | INFO     | current chi2=2.9041103083014 (change=52.80937472174525 %)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,802 | INFO     | sum of square deviations: 20144424840.019794
[2025-11-24 22:25:57] 2025-11-25 03:25:20,805 | INFO     | sum of deviations: 525228494851.4477
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | mean x: 1764028230.766169
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | mean y: 3465446.73880597
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | intersect: -45990297089.48989
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | chi2: 2.6111848024298183
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | current chi2=2.6111848024298183 (change=10.086583317247081 %)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,806 | INFO     | right removable region: 401
[2025-11-24 22:25:57] 2025-11-25 03:25:20,807 | INFO     | sum of square deviations: 20905397431.341476
[2025-11-24 22:25:57] 2025-11-25 03:25:20,811 | INFO     | sum of deviations: 191543632777.07864
[2025-11-24 22:25:57] 2025-11-25 03:25:20,811 | INFO     | mean x: 1764028688.2653563
[2025-11-24 22:25:57] 2025-11-25 03:25:20,811 | INFO     | mean y: 3455353.1474201474
[2025-11-24 22:25:57] 2025-11-25 03:25:20,811 | INFO     | intersect: -16159282733.178894
[2025-11-24 22:25:57] 2025-11-25 03:25:20,812 | INFO     | chi2: 3.6983775878203295
[2025-11-24 22:25:57] 2025-11-25 03:25:20,812 | INFO     | current chi2=3.6983775878203295 (change=39.90285066464783 %)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,812 | INFO     | sum of square deviations: 20144366950.54978
[2025-11-24 22:25:57] 2025-11-25 03:25:20,816 | INFO     | sum of deviations: 159163288002.82584
[2025-11-24 22:25:57] 2025-11-25 03:25:20,816 | INFO     | mean x: 1764028840.7636817
[2025-11-24 22:25:57] 2025-11-25 03:25:20,816 | INFO     | mean y: 3461835.577114428
[2025-11-24 22:25:57] 2025-11-25 03:25:20,816 | INFO     | intersect: -13934361632.243408
[2025-11-24 22:25:57] 2025-11-25 03:25:20,817 | INFO     | chi2: 3.6384348648981684
[2025-11-24 22:25:57] 2025-11-25 03:25:20,817 | INFO     | current chi2=3.6384348648981684 (change=1.6207842898347473 %)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,817 | INFO     | left removable region: 20
[2025-11-24 22:25:57] 2025-11-25 03:25:20,817 | INFO     | sum of square deviations: 17149474317.154785
[2025-11-24 22:25:57] 2025-11-25 03:25:20,820 | INFO     | sum of deviations: 311377713182.2942
[2025-11-24 22:25:57] 2025-11-25 03:25:20,820 | INFO     | mean x: 1764028810.2703412
[2025-11-24 22:25:57] 2025-11-25 03:25:20,821 | INFO     | mean y: 3509097.12335958
[2025-11-24 22:25:57] 2025-11-25 03:25:20,821 | INFO     | intersect: -32025417665.967712
[2025-11-24 22:25:57] 2025-11-25 03:25:20,821 | INFO     | chi2: 0.02967019459287599
[2025-11-24 22:25:57] 2025-11-25 03:25:20,821 | INFO     | current memory leak: 18.16 B/s (using 381 data points, chi2=0.03)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | could have reported an average CPU frequency of 2405 MHz (17 samples)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | ..............................
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | . Timing measurements:
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | . get job = 0 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | . initial setup = 2 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | . payload setup = 7 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,822 | INFO     | . stage-in = 0 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,823 | INFO     | . payload execution = 25112 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,823 | INFO     | . stage-out = 3 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,823 | INFO     | . log creation = 0 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,823 | INFO     | ..............................
[2025-11-24 22:25:57] 2025-11-25 03:25:20,909 | INFO     | 
[2025-11-24 22:25:57] 2025-11-25 03:25:20,909 | INFO     | job summary report
[2025-11-24 22:25:57] 2025-11-25 03:25:20,909 | INFO     | --------------------------------------------------
[2025-11-24 22:25:57] 2025-11-25 03:25:20,909 | INFO     | PanDA job id: 6895373296
[2025-11-24 22:25:57] 2025-11-25 03:25:20,910 | INFO     | task id: 47556137
[2025-11-24 22:25:57] 2025-11-25 03:25:20,910 | INFO     | errors: (none)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:25:57] 2025-11-25 03:25:20,910 | INFO     | pilot state: finished 
[2025-11-24 22:25:57] 2025-11-25 03:25:20,910 | INFO     | transexitcode: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | exeerrorcode: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | exeerrordiag: 
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | exitcode: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | exitmsg: OK
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | cpuconsumptiontime: 288746 s
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | nevents: 1000
[2025-11-24 22:25:57] 2025-11-25 03:25:20,911 | INFO     | neventsw: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | pid: 20476
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | pgrp: 20476
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | corecount: 12
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | event service: False
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | sizes: {0: 2283431, 1: 2284287, 6: 2284549, 12: 2284577, 25123: 2321503, 25124: 2321502, 25129: 2330736, 25134: 2330990}
[2025-11-24 22:25:57] 2025-11-25 03:25:20,912 | INFO     | --------------------------------------------------
[2025-11-24 22:25:57] 2025-11-25 03:25:20,913 | INFO     | 
[2025-11-24 22:25:57] 2025-11-25 03:25:20,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 22:25:57] 2025-11-25 03:25:20,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,943 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,943 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:25:57] 2025-11-25 03:25:20,943 | INFO     | job 6895373296 has completed (purged errors)
[2025-11-24 22:25:57] 2025-11-25 03:25:20,943 | INFO     | overall cleanup function is called
[2025-11-24 22:25:57] 2025-11-25 03:25:21,959 | INFO     | --- collectZombieJob: --- 10, [20476]
[2025-11-24 22:25:57] 2025-11-25 03:25:21,960 | INFO     | zombie collector waiting for pid 20476
[2025-11-24 22:25:57] 2025-11-25 03:25:21,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:25:57] 2025-11-25 03:25:21,960 | INFO     | collected zombie processes
[2025-11-24 22:25:57] 2025-11-25 03:25:21,960 | INFO     | will attempt to kill all subprocesses of pid=20476
[2025-11-24 22:25:57] 2025-11-25 03:25:22,054 | INFO     | process IDs to be killed: [20476] (in reverse order)
[2025-11-24 22:25:57] 2025-11-25 03:25:22,198 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:25:57] 2025-11-25 03:25:22,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:25:57] 2025-11-25 03:25:22,202 | INFO     | did not find any defunct processes belonging to 20476
[2025-11-24 22:25:57] 2025-11-25 03:25:22,205 | INFO     | did not find any defunct processes belonging to 20476
[2025-11-24 22:25:57] 2025-11-25 03:25:22,208 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:25:57] 2025-11-25 03:25:22,208 | INFO     | ready for new job
[2025-11-24 22:25:57] 2025-11-25 03:25:22,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:25:57] 2025-11-25 03:25:22,210 | INFO     | ***************************************
[2025-11-24 22:25:57] 2025-11-25 03:25:22,210 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:25:57] 2025-11-25 03:25:22,210 | INFO     | ***************************************
[2025-11-24 22:25:57] 2025-11-25 03:25:22,210 | INFO     | 
[2025-11-24 22:25:57] 2025-11-25 03:25:22,211 | INFO     | architecture information:
[2025-11-24 22:25:57] 2025-11-25 03:25:22,212 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:25:57] 2025-11-25 03:25:22,228 | INFO     | cat /etc/os-release:
[2025-11-24 22:25:57] NAME="CentOS Linux"
[2025-11-24 22:25:57] VERSION="7 (Core)"
[2025-11-24 22:25:57] ID="centos"
[2025-11-24 22:25:57] ID_LIKE="rhel fedora"
[2025-11-24 22:25:57] VERSION_ID="7"
[2025-11-24 22:25:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:25:57] ANSI_COLOR="0;31"
[2025-11-24 22:25:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:25:57] HOME_URL="https://www.centos.org/"
[2025-11-24 22:25:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:25:57] 
[2025-11-24 22:25:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:25:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:25:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:25:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:25:57] 
[2025-11-24 22:25:57] 2025-11-25 03:25:22,228 | INFO     | ***************************************
[2025-11-24 22:25:57] 2025-11-25 03:25:22,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 22:25:57] 2025-11-25 03:25:22,749 | INFO     | sufficient remaining disk space (28266463232 B)
[2025-11-24 22:25:57] 2025-11-25 03:25:22,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:25:57] 2025-11-25 03:25:22,750 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:25:57] 2025-11-25 03:25:22,750 | INFO     | update_server=False
[2025-11-24 22:25:57] 2025-11-25 03:25:22,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:25:57] 2025-11-25 03:25:22,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:25:57] 2025-11-25 03:25:22,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:25:57] 2025-11-25 03:25:22,751 | INFO     | aborting loop
[2025-11-24 22:25:57] 2025-11-25 03:25:22,927 | INFO     | all payload control threads have been joined
[2025-11-24 22:25:57] 2025-11-25 03:25:23,181 | INFO     | all job control threads have been joined
[2025-11-24 22:25:57] 2025-11-25 03:25:23,281 | INFO     | all data control threads have been joined
[2025-11-24 22:25:57] 2025-11-25 03:25:23,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:25:57] 2025-11-25 03:25:23,756 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:23,757 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:23,758 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:23,932 | INFO     | [payload] control thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:23,949 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:23,952 | INFO     | [job] validate thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,134 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,186 | INFO     | [job] control thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,286 | INFO     | [data] control thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,446 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,513 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,767 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:24,822 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:25,430 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:26,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:25:57] 2025-11-25 03:25:30,011 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:25:57] 2025-11-25 03:25:51,743 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:25:57] 2025-11-25 03:25:52,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076976756544)>', '<ExcThread(monitor, started 140076222752512)>']
[2025-11-24 22:25:57] 2025-11-25 03:25:53,831 | INFO     | PID=14111 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:25:57] 2025-11-25 03:25:53,831 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:25:57] 2025-11-25 03:25:53,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:25:57] 2025-11-25 03:25:53,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:25:57] 2025-11-25 03:25:53,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:25:57] 2025-11-25 03:25:53,832 | INFO     | [monitor] control thread has ended
[2025-11-24 22:25:57] 2025-11-25 03:25:57,297 | INFO     | all workflow threads have been joined
[2025-11-24 22:25:57] 2025-11-25 03:25:57,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:25:57] 2025-11-25 03:25:57,297 | INFO     | traces error code: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:57,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:25:57] 2025-11-25 03:25:57,390 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:25:57] 2025-11-25 03:25:57,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:25:57] 2025-11-25 03:25:57,398 [wrapper] pilotpid: 14111
[2025-11-24 22:25:57] 2025-11-25 03:25:57,402 [wrapper] Pilot exit status: 0
[2025-11-24 22:25:57] 2025-11-25 03:25:57,418 [wrapper] pandaids: 6895373296
[2025-11-24 22:25:57] 2025-11-25 03:25:57,460 [wrapper] cleanup supervisor_pilot 24378 14112
[2025-11-24 22:25:57] 2025-11-25 03:25:57,464 [wrapper] Test setup, not cleaning
[2025-11-24 22:25:57] 2025-11-25 03:25:57,468 [wrapper] apfmon messages muted
[2025-11-24 22:25:57] 2025-11-25 03:25:57,472 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:25:57] 2025-11-25 03:25:57,476 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:25:57]  *** Error codes and diagnostics ***
[2025-11-24 22:25:57]     "exeErrorCode": 0,
[2025-11-24 22:25:57]     "exeErrorDiag": "",
[2025-11-24 22:25:57]     "pilotErrorCode": 0,
[2025-11-24 22:25:57]     "pilotErrorDiag": "",
[2025-11-24 22:25:57]  *** Listing of results directory ***
[2025-11-24 22:25:57] total 1294816
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:35 queuedata.json
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-24 22:25:57] -rwx------ 1 boincer umatlas     36292 Nov 23 17:36 runpilot2-wrapper.sh
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas       100 Nov 24 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:25:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 15:25 run_atlas
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas       105 Nov 24 15:25 job.xml
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas 409505054 Nov 24 15:25 EVNT.47483658._000927.pool.root.1
[2025-11-24 22:25:57] drwxrwx--x 2 boincer umatlas      4096 Nov 24 15:25 shared
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 15:25 input.tar.gz
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:25 start_atlas.sh
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas         0 Nov 24 15:25 boinc_lockfile
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 15:25 pandaJob.out
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas        57 Nov 24 15:25 setup.sh.local
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas    991801 Nov 24 15:26 agis_schedconf.cvmfs.json
[2025-11-24 22:25:57] drwx------ 5 boincer umatlas      4096 Nov 24 15:26 pilot3
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas       532 Nov 24 22:16 boinc_task_state.xml
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 22:18 init_data.xml
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas 901098027 Nov 24 22:24 HITS.47556137._009139.pool.root.1
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas      1062 Nov 24 22:25 memory_monitor_summary.json
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas   1516227 Nov 24 22:25 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas   2169823 Nov 24 22:25 log.47556137._009139.job.log.tgz.1
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas        95 Nov 24 22:25 pilot_heartbeat.json
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas      8666 Nov 24 22:25 heartbeat.json
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 22:25 boinc_mmap_file
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas        29 Nov 24 22:25 wrapper_checkpoint.txt
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas      4746 Nov 24 22:25 pilotlog.txt
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas   3515866 Nov 24 22:25 log.47556137._009139.job.log.1
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas       353 Nov 24 22:25 output.list
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas       620 Nov 24 22:25 runtime_log
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas   5703680 Nov 24 22:25 result.tar.gz
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas       670 Nov 24 22:25 40pKDmtrXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjFLKDmmpnTRn.diag
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 22:25 runtime_log.err
[2025-11-24 22:25:57] -rw-r--r-- 1 boincer umatlas     21347 Nov 24 22:25 stderr.txt
[2025-11-24 22:25:57] HITS file was successfully produced:
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas 901098027 Nov 24 22:24 shared/HITS.pool.root.1
[2025-11-24 22:25:57]  *** Contents of shared directory: ***
[2025-11-24 22:25:57] total 1286060
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas 409505054 Nov 24 15:25 ATLAS.root_0
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 15:25 input.tar.gz
[2025-11-24 22:25:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:25 start_atlas.sh
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas 901098027 Nov 24 22:24 HITS.pool.root.1
[2025-11-24 22:25:57] -rw------- 1 boincer umatlas   5703680 Nov 24 22:25 result.tar.gz
22:25:58 (10391): run_atlas exited; CPU time 282295.886937
22:25:58 (10391): called boinc_finish(0)

</stderr_txt>
]]>

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