Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:44 (3023587): wrapper (7.7.26015): starting
03:27:44 (3023587): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:27:44] Arguments: --nthreads 8
[2025-11-25 03:27:44] Threads: 8
[2025-11-25 03:27:44] Checking for CVMFS
[2025-11-25 03:27:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:27:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:27:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:27:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:27:46] 2.13.3.0 14259 26931 340496 153276 0 103 21646045 32935937 26953 16776704 0 159215835 99.789 85314403 34085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 03:27:46] CVMFS is ok
[2025-11-25 03:27:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:27:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:27:46] Further information can be found at the LHC@home message board.
[2025-11-25 03:27:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:27:46] Checking for apptainer binary...
[2025-11-25 03:27:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:27:46] Running /usr/bin/apptainer --version
[2025-11-25 03:27:46] apptainer version 1.4.4-1.el9
[2025-11-25 03:27:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:27:46] c-4-36.aglt2.org
[2025-11-25 03:27:46] apptainer works
[2025-11-25 03:27:47] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:27:47] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:27:47] Starting ATLAS job with PandaID=6895373225
[2025-11-25 03:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:03:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:03:10] 2025-11-26 04:02:37,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:03:10] 2025-11-26 04:02:37,106 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:03:10] 2025-11-26 04:02:37,108 | INFO     | sum of square deviations: 475295755442.7335
[2025-11-25 23:03:10] 2025-11-26 04:02:37,140 | INFO     | sum of deviations: 3202746411135.154
[2025-11-25 23:03:10] 2025-11-26 04:02:37,140 | INFO     | mean x: 1764094593.9262793
[2025-11-25 23:03:10] 2025-11-26 04:02:37,140 | INFO     | mean y: 2909373.0017346055
[2025-11-25 23:03:10] 2025-11-26 04:02:37,141 | INFO     | intersect: -11884315717.694572
[2025-11-25 23:03:10] 2025-11-26 04:02:37,142 | INFO     | chi2: 10.837436007119186
[2025-11-25 23:03:10] 2025-11-26 04:02:37,144 | INFO     | sum of square deviations: 469139444813.4252
[2025-11-25 23:03:10] 2025-11-26 04:02:37,174 | INFO     | sum of deviations: 3589884103533.633
[2025-11-25 23:03:10] 2025-11-26 04:02:37,174 | INFO     | mean x: 1764094441.4303136
[2025-11-25 23:03:10] 2025-11-26 04:02:37,175 | INFO     | mean y: 2918961.395470383
[2025-11-25 23:03:10] 2025-11-26 04:02:37,175 | INFO     | intersect: -13496041022.541271
[2025-11-25 23:03:10] 2025-11-26 04:02:37,176 | INFO     | chi2: 7.70558441407659
[2025-11-25 23:03:10] 2025-11-26 04:02:37,176 | INFO     | current chi2=7.70558441407659 (change=28.898455234109445 %)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,178 | INFO     | sum of square deviations: 463036530534.0785
[2025-11-25 23:03:10] 2025-11-26 04:02:37,209 | INFO     | sum of deviations: 3876959824114.918
[2025-11-25 23:03:10] 2025-11-26 04:02:37,209 | INFO     | mean x: 1764094288.9343832
[2025-11-25 23:03:10] 2025-11-26 04:02:37,209 | INFO     | mean y: 2926128.6789151356
[2025-11-25 23:03:10] 2025-11-26 04:02:37,209 | INFO     | intersect: -14767663734.415737
[2025-11-25 23:03:10] 2025-11-26 04:02:37,211 | INFO     | chi2: 5.651372735903059
[2025-11-25 23:03:10] 2025-11-26 04:02:37,211 | INFO     | current chi2=5.651372735903059 (change=26.658739529488372 %)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,212 | INFO     | sum of square deviations: 456986780042.1939
[2025-11-25 23:03:10] 2025-11-26 04:02:37,242 | INFO     | sum of deviations: 4005570885525.1597
[2025-11-25 23:03:10] 2025-11-26 04:02:37,243 | INFO     | mean x: 1764094136.4384885
[2025-11-25 23:03:10] 2025-11-26 04:02:37,243 | INFO     | mean y: 2929369.1379613355
[2025-11-25 23:03:10] 2025-11-26 04:02:37,243 | INFO     | intersect: -15459671346.776033
[2025-11-25 23:03:10] 2025-11-26 04:02:37,244 | INFO     | chi2: 5.135951092258653
[2025-11-25 23:03:10] 2025-11-26 04:02:37,245 | INFO     | current chi2=5.135951092258653 (change=9.120291082022296 %)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,245 | INFO     | right removable region: 1137
[2025-11-25 23:03:10] 2025-11-26 04:02:37,246 | INFO     | sum of square deviations: 469138793333.42487
[2025-11-25 23:03:10] 2025-11-26 04:02:37,277 | INFO     | sum of deviations: 2743819799925.1265
[2025-11-25 23:03:10] 2025-11-26 04:02:37,277 | INFO     | mean x: 1764094746.4303136
[2025-11-25 23:03:10] 2025-11-26 04:02:37,277 | INFO     | mean y: 2920738.507839721
[2025-11-25 23:03:10] 2025-11-26 04:02:37,277 | INFO     | intersect: -10314618895.77959
[2025-11-25 23:03:10] 2025-11-26 04:02:37,279 | INFO     | chi2: 6.890345006725323
[2025-11-25 23:03:10] 2025-11-26 04:02:37,279 | INFO     | current chi2=6.890345006725323 (change=36.42089326110891 %)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,281 | INFO     | sum of square deviations: 463035367265.8135
[2025-11-25 23:03:10] 2025-11-26 04:02:37,311 | INFO     | sum of deviations: 2540141823493.4434
[2025-11-25 23:03:10] 2025-11-26 04:02:37,311 | INFO     | mean x: 1764094898.9326334
[2025-11-25 23:03:10] 2025-11-26 04:02:37,311 | INFO     | mean y: 2925821.888888889
[2025-11-25 23:03:10] 2025-11-26 04:02:37,312 | INFO     | intersect: -9674631337.190487
[2025-11-25 23:03:10] 2025-11-26 04:02:37,313 | INFO     | chi2: 6.085451402587772
[2025-11-25 23:03:10] 2025-11-26 04:02:37,313 | INFO     | current chi2=6.085451402587772 (change=11.681470279818134 %)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,313 | INFO     | left removable region: 20
[2025-11-25 23:03:10] 2025-11-26 04:02:37,315 | INFO     | sum of square deviations: 432151417146.5578
[2025-11-25 23:03:10] 2025-11-26 04:02:37,344 | INFO     | sum of deviations: 3209320060520.016
[2025-11-25 23:03:10] 2025-11-26 04:02:37,344 | INFO     | mean x: 1764094715.9444942
[2025-11-25 23:03:10] 2025-11-26 04:02:37,344 | INFO     | mean y: 2950095.661593554
[2025-11-25 23:03:10] 2025-11-26 04:02:37,344 | INFO     | intersect: -13097885250.246794
[2025-11-25 23:03:10] 2025-11-26 04:02:37,346 | INFO     | chi2: 0.26103587641870934
[2025-11-25 23:03:10] 2025-11-26 04:02:37,346 | INFO     | current memory leak: 7.43 B/s (using 1117 data points, chi2=0.26)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,347 | INFO     | could have reported an average CPU frequency of 2600 MHz (42 samples)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,347 | INFO     | ..............................
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . Timing measurements:
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . get job = 0 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . initial setup = 5 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . payload setup = 39 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . stage-in = 0 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . payload execution = 70312 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . stage-out = 4 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | . log creation = 1 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,348 | INFO     | ..............................
[2025-11-25 23:03:10] 2025-11-26 04:02:37,449 | INFO     | 
[2025-11-25 23:03:10] 2025-11-26 04:02:37,449 | INFO     | job summary report
[2025-11-25 23:03:10] 2025-11-26 04:02:37,449 | INFO     | --------------------------------------------------
[2025-11-25 23:03:10] 2025-11-26 04:02:37,449 | INFO     | PanDA job id: 6895373225
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | task id: 47556149
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | errors: (none)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | pilot state: finished 
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | transexitcode: 0
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | exeerrorcode: 0
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | exeerrordiag: 
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | exitcode: 0
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | exitmsg: OK
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | cpuconsumptiontime: 305375 s
[2025-11-25 23:03:10] 2025-11-26 04:02:37,450 | INFO     | nevents: 1000
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | neventsw: 0
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | pid: 3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | pgrp: 3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | corecount: 8
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | event service: False
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | sizes: {0: 2284138, 1: 2284309, 2: 2284365, 13: 2284365, 25: 2284711, 35: 2284711, 70356: 2344399, 70361: 2353454, 70371: 2353644}
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | --------------------------------------------------
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | 
[2025-11-25 23:03:10] 2025-11-26 04:02:37,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 23:03:10] 2025-11-26 04:02:37,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:03:10] 2025-11-26 04:02:37,473 | INFO     | job 6895373225 has completed (purged errors)
[2025-11-25 23:03:10] 2025-11-26 04:02:37,473 | INFO     | overall cleanup function is called
[2025-11-25 23:03:10] 2025-11-26 04:02:38,492 | INFO     | --- collectZombieJob: --- 10, [3046924]
[2025-11-25 23:03:10] 2025-11-26 04:02:38,493 | INFO     | zombie collector waiting for pid 3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:38,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:03:10] 2025-11-26 04:02:38,493 | INFO     | collected zombie processes
[2025-11-25 23:03:10] 2025-11-26 04:02:38,493 | INFO     | will attempt to kill all subprocesses of pid=3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:38,976 | INFO     | process IDs to be killed: [3046924] (in reverse order)
[2025-11-25 23:03:10] 2025-11-26 04:02:39,166 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:03:10] 2025-11-26 04:02:39,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:03:10] 2025-11-26 04:02:39,184 | INFO     | did not find any defunct processes belonging to 3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:39,201 | INFO     | did not find any defunct processes belonging to 3046924
[2025-11-25 23:03:10] 2025-11-26 04:02:39,202 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:03:10] 2025-11-26 04:02:39,202 | INFO     | ready for new job
[2025-11-25 23:03:10] 2025-11-26 04:02:39,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:03:10] 2025-11-26 04:02:39,208 | INFO     | ***************************************
[2025-11-25 23:03:10] 2025-11-26 04:02:39,208 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:03:10] 2025-11-26 04:02:39,208 | INFO     | ***************************************
[2025-11-25 23:03:10] 2025-11-26 04:02:39,208 | INFO     | 
[2025-11-25 23:03:10] 2025-11-26 04:02:39,210 | INFO     | architecture information:
[2025-11-25 23:03:10] 2025-11-26 04:02:39,210 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:03:10] 2025-11-26 04:02:39,229 | INFO     | cat /etc/os-release:
[2025-11-25 23:03:10] NAME="CentOS Linux"
[2025-11-25 23:03:10] VERSION="7 (Core)"
[2025-11-25 23:03:10] ID="centos"
[2025-11-25 23:03:10] ID_LIKE="rhel fedora"
[2025-11-25 23:03:10] VERSION_ID="7"
[2025-11-25 23:03:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:03:10] ANSI_COLOR="0;31"
[2025-11-25 23:03:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:03:10] HOME_URL="https://www.centos.org/"
[2025-11-25 23:03:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:03:10] 
[2025-11-25 23:03:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:03:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:03:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:03:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:03:10] 
[2025-11-25 23:03:10] 2025-11-26 04:02:39,230 | INFO     | ***************************************
[2025-11-25 23:03:10] 2025-11-26 04:02:39,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 23:03:10] 2025-11-26 04:02:39,792 | INFO     | sufficient remaining disk space (71656538112 B)
[2025-11-25 23:03:10] 2025-11-26 04:02:39,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:03:10] 2025-11-26 04:02:39,793 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:03:10] 2025-11-26 04:02:39,793 | INFO     | update_server=False
[2025-11-25 23:03:10] 2025-11-26 04:02:39,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:03:10] 2025-11-26 04:02:39,875 | INFO     | all data control threads have been joined
[2025-11-25 23:03:10] 2025-11-26 04:02:40,178 | INFO     | all payload control threads have been joined
[2025-11-25 23:03:10] 2025-11-26 04:02:40,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:03:10] 2025-11-26 04:02:40,351 | INFO     | aborting loop
[2025-11-25 23:03:10] 2025-11-26 04:02:40,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:03:10] 2025-11-26 04:02:40,800 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:40,832 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:40,881 | INFO     | [data] control thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,132 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,133 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,183 | INFO     | [payload] control thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,356 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,423 | INFO     | all job control threads have been joined
[2025-11-25 23:03:10] 2025-11-26 04:02:41,676 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,709 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:41,814 | INFO     | [job] validate thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:42,433 | INFO     | [job] control thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:42,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:03:10] 2025-11-26 04:02:42,475 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:42,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:03:10] 2025-11-26 04:02:43,468 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:46,598 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:47,483 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:03:10] 2025-11-26 04:02:50,695 | INFO     | job.realtimelogging is not enabled
[2025-11-25 23:03:10] 2025-11-26 04:02:51,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:03:10] 2025-11-26 04:02:53,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039459764032)>', '<ExcThread(monitor, started 140038725682944)>']
[2025-11-25 23:03:10] 2025-11-26 04:02:58,630 | INFO     | all workflow threads have been joined
[2025-11-25 23:03:10] 2025-11-26 04:02:58,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:03:10] 2025-11-26 04:02:58,631 | INFO     | traces error code: 0
[2025-11-25 23:03:10] 2025-11-26 04:02:58,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:03:10] 2025-11-26 04:03:09,382 | INFO     | PID=3030674 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:03:10] 2025-11-26 04:03:09,382 | INFO     | .. there are 43 such processes running
[2025-11-25 23:03:10] 2025-11-26 04:03:09,382 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:03:10] 2025-11-26 04:03:09,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:03:10] 2025-11-26 04:03:09,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:03:10] 2025-11-26 04:03:09,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:03:10] 2025-11-26 04:03:09,383 | INFO     | [monitor] control thread has ended
[2025-11-25 23:03:10] 2025-11-26 04:03:09,614 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:03:10] 2025-11-26 04:03:09,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:03:10] 2025-11-26 04:03:09,649 [wrapper] pilotpid: 3030674
[2025-11-25 23:03:10] 2025-11-26 04:03:09,662 [wrapper] Pilot exit status: 0
[2025-11-25 23:03:10] 2025-11-26 04:03:09,803 [wrapper] pandaids: 6895373225
[2025-11-25 23:03:10] 2025-11-26 04:03:10,002 [wrapper] cleanup supervisor_pilot 2893511 3030675
[2025-11-25 23:03:10] 2025-11-26 04:03:10,005 [wrapper] Test setup, not cleaning
[2025-11-25 23:03:10] 2025-11-26 04:03:10,008 [wrapper] apfmon messages muted
[2025-11-25 23:03:10] 2025-11-26 04:03:10,010 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:03:10] 2025-11-26 04:03:10,013 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:03:10]  *** Error codes and diagnostics ***
[2025-11-25 23:03:10]     "exeErrorCode": 0,
[2025-11-25 23:03:10]     "exeErrorDiag": "",
[2025-11-25 23:03:10]     "pilotErrorCode": 0,
[2025-11-25 23:03:10]     "pilotErrorDiag": "",
[2025-11-25 23:03:10]  *** Listing of results directory ***
[2025-11-25 23:03:10] total 1331480
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:28 pilot3.tar.gz
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:32 queuedata.json
[2025-11-25 23:03:10] -rwx------. 1 boincer umatlas     36292 Nov 23 17:32 runpilot2-wrapper.sh
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas       100 Nov 25 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:03:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 03:27 run_atlas
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas       105 Nov 25 03:27 job.xml
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas 408506217 Nov 25 03:27 EVNT.47483658._001199.pool.root.1
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 03:27 start_atlas.sh
[2025-11-25 23:03:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 03:27 shared
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 03:27 input.tar.gz
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas         0 Nov 25 03:27 boinc_lockfile
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 03:27 pandaJob.out
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas        57 Nov 25 03:27 setup.sh.local
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas    991858 Nov 25 03:28 agis_schedconf.cvmfs.json
[2025-11-25 23:03:10] drwx------. 5 boincer umatlas      4096 Nov 25 03:28 pilot3
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:46 boinc_task_state.xml
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas 927322201 Nov 25 23:01 HITS.47556149._001857.pool.root.1
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 23:01 init_data.xml
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas      1058 Nov 25 23:02 memory_monitor_summary.json
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:02 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas   2305055 Nov 25 23:02 log.47556149._001857.job.log.tgz.1
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas        95 Nov 25 23:02 pilot_heartbeat.json
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas      8616 Nov 25 23:02 heartbeat.json
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:03 boinc_mmap_file
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas       823 Nov 25 23:03 pilotlog.txt
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:03 wrapper_checkpoint.txt
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas   9539200 Nov 25 23:03 log.47556149._001857.job.log.1
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas       353 Nov 25 23:03 output.list
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:03 runtime_log
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas  11868160 Nov 25 23:03 result.tar.gz
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas       658 Nov 25 23:03 zJLKDmVoXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9ELKDmc8ivGm.diag
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 23:03 runtime_log.err
[2025-11-25 23:03:10] -rw-r--r--. 1 boincer umatlas     21126 Nov 25 23:03 stderr.txt
[2025-11-25 23:03:10] HITS file was successfully produced:
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas 927322201 Nov 25 23:01 shared/HITS.pool.root.1
[2025-11-25 23:03:10]  *** Contents of shared directory: ***
[2025-11-25 23:03:10] total 1316716
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas 408506217 Nov 25 03:27 ATLAS.root_0
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 03:27 start_atlas.sh
[2025-11-25 23:03:10] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 03:27 input.tar.gz
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas 927322201 Nov 25 23:01 HITS.pool.root.1
[2025-11-25 23:03:10] -rw-------. 1 boincer umatlas  11868160 Nov 25 23:03 result.tar.gz
23:03:11 (3023587): run_atlas exited; CPU time 307609.474900
23:03:11 (3023587): called boinc_finish(0)

</stderr_txt>
]]>

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