Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:04:27 (32374): wrapper (7.7.26015): starting
23:04:27 (32374): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:04:27] Arguments: --nthreads 8
[2025-11-26 23:04:27] Threads: 8
[2025-11-26 23:04:27] Checking for CVMFS
[2025-11-26 23:04:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:04:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:04:30] 2.11.2.0 30743 82272 111284 153335 3 85 16826799 25165824 1288 130560 8 24391487 99.869 13798412 1750 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 23:04:30] CVMFS is ok
[2025-11-26 23:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:04:30] Checking for apptainer binary...
[2025-11-26 23:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:04:30] Running /usr/bin/apptainer --version
[2025-11-26 23:04:30] apptainer version 1.3.2-1.el7
[2025-11-26 23:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:04:34] cg-vwn349.simple-grid.lan
[2025-11-26 23:04:34] apptainer works
[2025-11-26 23:04:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:04:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:04:34] Starting ATLAS job with PandaID=6895359108
[2025-11-26 23:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:42:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:42:05] 2025-11-27 21:41:16,678 | INFO     | time since job start (84781s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:16,933 | INFO     | monitor loop #5708: job 0:6895359108 is in state 'finished'
[2025-11-27 22:42:05] 2025-11-27 21:41:16,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:42:05] 2025-11-27 21:41:18,686 | INFO     | time since job start (84783s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:19,438 | INFO     | monitor loop #5709: job 0:6895359108 is in state 'finished'
[2025-11-27 22:42:05] 2025-11-27 21:41:19,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:42:05] 2025-11-27 21:41:20,700 | INFO     | time since job start (84785s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:21,943 | INFO     | monitor loop #5710: job 0:6895359108 is in state 'finished'
[2025-11-27 22:42:05] 2025-11-27 21:41:21,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:42:05] 2025-11-27 21:41:22,710 | INFO     | time since job start (84787s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:24,448 | INFO     | monitor loop #5711: job 0:6895359108 is in state 'finished'
[2025-11-27 22:42:05] 2025-11-27 21:41:24,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:42:05] 2025-11-27 21:41:24,720 | INFO     | time since job start (84789s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:26,727 | INFO     | time since job start (84791s) is within the limit (172800.0s)
[2025-11-27 22:42:05] 2025-11-27 21:41:26,955 | INFO     | monitor loop #5712: job 0:6895359108 is in state 'finished'
[2025-11-27 22:42:05] 2025-11-27 21:41:26,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:42:05] 2025-11-27 21:41:27,072 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 22:42:05] 2025-11-27 21:41:27,074 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6895359108/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,075 | INFO     | extracted standard info from prmon json
[2025-11-27 22:42:05] 2025-11-27 21:41:27,075 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:42:05] 2025-11-27 21:41:27,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:42:05] 2025-11-27 21:41:27,112 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:42:05] 2025-11-27 21:41:27,114 | INFO     | sum of square deviations: 814920256353.7533
[2025-11-27 22:42:05] 2025-11-27 21:41:27,216 | INFO     | sum of deviations: 2826509584290.7495
[2025-11-27 22:42:05] 2025-11-27 21:41:27,217 | INFO     | mean x: 1764237481.5724638
[2025-11-27 22:42:05] 2025-11-27 21:41:27,217 | INFO     | mean y: 2851337.3775362317
[2025-11-27 22:42:05] 2025-11-27 21:41:27,217 | INFO     | intersect: -6116316902.397901
[2025-11-27 22:42:05] 2025-11-27 21:41:27,218 | INFO     | chi2: 19.032346959569878
[2025-11-27 22:42:05] 2025-11-27 21:41:27,220 | INFO     | sum of square deviations: 806094923662.9817
[2025-11-27 22:42:05] 2025-11-27 21:41:27,285 | INFO     | sum of deviations: 3287228866131.2705
[2025-11-27 22:42:05] 2025-11-27 21:41:27,286 | INFO     | mean x: 1764237329.0763636
[2025-11-27 22:42:05] 2025-11-27 21:41:27,286 | INFO     | mean y: 2859297.645090909
[2025-11-27 22:42:05] 2025-11-27 21:41:27,286 | INFO     | intersect: -7191643117.148474
[2025-11-27 22:42:05] 2025-11-27 21:41:27,288 | INFO     | chi2: 15.797371543576538
[2025-11-27 22:42:05] 2025-11-27 21:41:27,288 | INFO     | current chi2=15.797371543576538 (change=16.997249066893055 %)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,288 | INFO     | right removable region: 1374
[2025-11-27 22:42:05] 2025-11-27 21:41:27,290 | INFO     | sum of square deviations: 806094020862.9824
[2025-11-27 22:42:05] 2025-11-27 21:41:27,351 | INFO     | sum of deviations: 2257887530793.2744
[2025-11-27 22:42:05] 2025-11-27 21:41:27,351 | INFO     | mean x: 1764237634.0763636
[2025-11-27 22:42:05] 2025-11-27 21:41:27,351 | INFO     | mean y: 2861161.4545454546
[2025-11-27 22:42:05] 2025-11-27 21:41:27,351 | INFO     | intersect: -4938808237.200311
[2025-11-27 22:42:05] 2025-11-27 21:41:27,353 | INFO     | chi2: 14.570833720526045
[2025-11-27 22:42:05] 2025-11-27 21:41:27,353 | INFO     | current chi2=14.570833720526045 (change=23.441739731423336 %)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,353 | INFO     | left removable region: 10
[2025-11-27 22:42:05] 2025-11-27 21:41:27,355 | INFO     | sum of square deviations: 786902179195.1344
[2025-11-27 22:42:05] 2025-11-27 21:41:27,430 | INFO     | sum of deviations: 2366362663818.8374
[2025-11-27 22:42:05] 2025-11-27 21:41:27,430 | INFO     | mean x: 1764237603.585044
[2025-11-27 22:42:05] 2025-11-27 21:41:27,430 | INFO     | mean y: 2878852.2470674487
[2025-11-27 22:42:05] 2025-11-27 21:41:27,430 | INFO     | intersect: -5302515014.496313
[2025-11-27 22:42:05] 2025-11-27 21:41:27,432 | INFO     | chi2: 7.835150295787635
[2025-11-27 22:42:05] 2025-11-27 21:41:27,432 | INFO     | current memory leak: 3.01 B/s (using 1364 data points, chi2=7.84)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,433 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | ..............................
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . Timing measurements:
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . get job = 0 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . initial setup = 8 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . payload setup = 162 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . stage-in = 0 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . payload execution = 84320 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . stage-out = 6 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,434 | INFO     | . log creation = 1 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,435 | INFO     | ..............................
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | job summary report
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | --------------------------------------------------
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | PanDA job id: 6895359108
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | task id: 47556149
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | errors: (none)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,749 | INFO     | pilot state: finished 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | transexitcode: 0
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | exeerrorcode: 0
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | exeerrordiag: 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | exitcode: 0
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | exitmsg: OK
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | cpuconsumptiontime: 318530 s
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | nevents: 1000
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | neventsw: 0
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | pid: 10351
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | pgrp: 10351
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | corecount: 8
[2025-11-27 22:42:05] 2025-11-27 21:41:27,750 | INFO     | event service: False
[2025-11-27 22:42:05] 2025-11-27 21:41:27,751 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 34: 2284349, 44: 2284377, 55: 2284533, 66: 2284561, 77: 2284589, 87: 2284645, 98: 2284673, 101: 2285243, 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,751 | INFO     | --------------------------------------------------
[2025-11-27 22:42:05] 2025-11-27 21:41:27,751 | INFO     | 
[2025-11-27 22:42:05] 2025-11-27 21:41:27,751 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-27 22:42:05] 2025-11-27 21:41:27,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:42:05] 2025-11-27 21:41:27,999 | INFO     | job 6895359108 has completed (purged errors)
[2025-11-27 22:42:05] 2025-11-27 21:41:27,999 | INFO     | overall cleanup function is called
[2025-11-27 22:42:05] 2025-11-27 21:41:29,017 | INFO     | --- collectZombieJob: --- 10, [10351]
[2025-11-27 22:42:05] 2025-11-27 21:41:29,017 | INFO     | zombie collector waiting for pid 10351
[2025-11-27 22:42:05] 2025-11-27 21:41:29,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:42:05] 2025-11-27 21:41:29,017 | INFO     | collected zombie processes
[2025-11-27 22:42:05] 2025-11-27 21:41:29,017 | INFO     | will attempt to kill all subprocesses of pid=10351
[2025-11-27 22:42:05] 2025-11-27 21:41:29,133 | INFO     | process IDs to be killed: [10351] (in reverse order)
[2025-11-27 22:42:05] 2025-11-27 21:41:29,741 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:42:05] 2025-11-27 21:41:29,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:42:05] 2025-11-27 21:41:29,745 | INFO     | did not find any defunct processes belonging to 10351
[2025-11-27 22:42:05] 2025-11-27 21:41:29,753 | INFO     | did not find any defunct processes belonging to 10351
[2025-11-27 22:42:05] 2025-11-27 21:41:29,799 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:42:05] 2025-11-27 21:41:29,799 | INFO     | ready for new job
[2025-11-27 22:42:05] 2025-11-27 21:41:29,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:42:05] 2025-11-27 21:41:29,805 | INFO     | ***************************************
[2025-11-27 22:42:05] 2025-11-27 21:41:29,806 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:42:05] 2025-11-27 21:41:29,806 | INFO     | ***************************************
[2025-11-27 22:42:05] 2025-11-27 21:41:29,806 | INFO     | 
[2025-11-27 22:42:05] 2025-11-27 21:41:29,806 | INFO     | pilot is running in a VM
[2025-11-27 22:42:05] 2025-11-27 21:41:29,807 | INFO     | architecture information:
[2025-11-27 22:42:05] 2025-11-27 21:41:29,816 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:42:05] 2025-11-27 21:41:29,967 | INFO     | cat /etc/os-release:
[2025-11-27 22:42:05] NAME="CentOS Linux"
[2025-11-27 22:42:05] VERSION="7 (Core)"
[2025-11-27 22:42:05] ID="centos"
[2025-11-27 22:42:05] ID_LIKE="rhel fedora"
[2025-11-27 22:42:05] VERSION_ID="7"
[2025-11-27 22:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:42:05] ANSI_COLOR="0;31"
[2025-11-27 22:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:42:05] HOME_URL="https://www.centos.org/"
[2025-11-27 22:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:42:05] 
[2025-11-27 22:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:42:05] 
[2025-11-27 22:42:05] 2025-11-27 21:41:29,967 | INFO     | ***************************************
[2025-11-27 22:42:05] 2025-11-27 21:41:30,471 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-27 22:42:05] 2025-11-27 21:41:30,660 | INFO     | sufficient remaining disk space (495128150016 B)
[2025-11-27 22:42:05] 2025-11-27 21:41:30,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:42:05] 2025-11-27 21:41:30,661 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:42:05] 2025-11-27 21:41:30,661 | INFO     | update_server=False
[2025-11-27 22:42:05] 2025-11-27 21:41:30,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:42:05] 2025-11-27 21:41:30,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:42:05] 2025-11-27 21:41:30,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:42:05] 2025-11-27 21:41:30,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:42:05] 2025-11-27 21:41:30,669 | INFO     | aborting loop
[2025-11-27 22:42:05] 2025-11-27 21:41:30,917 | INFO     | all payload control threads have been joined
[2025-11-27 22:42:05] 2025-11-27 21:41:31,437 | INFO     | all job control threads have been joined
[2025-11-27 22:42:05] 2025-11-27 21:41:31,667 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:31,675 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:31,681 | INFO     | all data control threads have been joined
[2025-11-27 22:42:05] 2025-11-27 21:41:31,765 | INFO     | [job] validate thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:31,855 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:31,923 | INFO     | [payload] control thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,246 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,333 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,443 | INFO     | [job] control thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:42:05] 2025-11-27 21:41:32,585 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,671 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,687 | INFO     | [data] control thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:32,695 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:33,029 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:33,169 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:33,581 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:34,671 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:42:05] 2025-11-27 21:41:42,787 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:42:05] 2025-11-27 21:41:44,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250845812544)>', '<ExcThread(monitor, started 140250261214976)>']
[2025-11-27 22:42:05] 2025-11-27 21:41:49,403 | INFO     | all workflow threads have been joined
[2025-11-27 22:42:05] 2025-11-27 21:41:49,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:42:05] 2025-11-27 21:41:49,403 | INFO     | traces error code: 0
[2025-11-27 22:42:05] 2025-11-27 21:41:49,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:42:05] 2025-11-27 21:41:59,897 | INFO     | PID=3766 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 22:42:05] 2025-11-27 21:41:59,897 | INFO     | .. there are 9 such processes running
[2025-11-27 22:42:05] 2025-11-27 21:41:59,899 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:42:05] 2025-11-27 21:41:59,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:42:05] 2025-11-27 21:41:59,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:42:05] 2025-11-27 21:41:59,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:42:05] 2025-11-27 21:41:59,899 | INFO     | [monitor] control thread has ended
[2025-11-27 22:42:05] 2025-11-27 21:42:00,199 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:42:05] 2025-11-27 21:42:00,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:42:05] 2025-11-27 21:42:00,393 [wrapper] pilotpid: 3766
[2025-11-27 22:42:05] 2025-11-27 21:42:00,509 [wrapper] Pilot exit status: 0
[2025-11-27 22:42:05] 2025-11-27 21:42:00,882 [wrapper] pandaids: 6895359108
[2025-11-27 22:42:05] 2025-11-27 21:42:01,856 [wrapper] cleanup supervisor_pilot 30788 3767
[2025-11-27 22:42:05] 2025-11-27 21:42:02,002 [wrapper] Test setup, not cleaning
[2025-11-27 22:42:05] 2025-11-27 21:42:02,103 [wrapper] apfmon messages muted
[2025-11-27 22:42:05] 2025-11-27 21:42:02,225 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:42:05] 2025-11-27 21:42:02,322 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:42:05]  *** Error codes and diagnostics ***
[2025-11-27 22:42:05]     "exeErrorCode": 0,
[2025-11-27 22:42:05]     "exeErrorDiag": "",
[2025-11-27 22:42:05]     "pilotErrorCode": 0,
[2025-11-27 22:42:05]     "pilotErrorDiag": "",
[2025-11-27 22:42:05]  *** Listing of results directory ***
[2025-11-27 22:42:05] total 1340420
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:20 queuedata.json
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc    576529 Nov 23 14:20 pilot3.tar.gz
[2025-11-27 22:42:05] -rwx------. 1 boinc boinc     36292 Nov 23 14:21 runpilot2-wrapper.sh
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc       100 Nov 26 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:42:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 23:04 run_atlas
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc       105 Nov 26 23:04 job.xml
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc      6393 Nov 26 23:04 init_data.xml
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc 410087965 Nov 26 23:04 EVNT.47483658._001164.pool.root.1
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:04 start_atlas.sh
[2025-11-27 22:42:05] drwxrwx--x. 2 boinc boinc        68 Nov 26 23:04 shared
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc    590105 Nov 26 23:04 input.tar.gz
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc         0 Nov 26 23:04 boinc_lockfile
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc      2785 Nov 26 23:04 pandaJob.out
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc    991538 Nov 26 23:08 agis_schedconf.cvmfs.json
[2025-11-27 22:42:05] drwx------. 5 boinc boinc      4096 Nov 26 23:08 pilot3
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc       533 Nov 27 22:19 boinc_task_state.xml
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc 931088709 Nov 27 22:38 HITS.47556149._001510.pool.root.1
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc      1029 Nov 27 22:39 memory_monitor_summary.json
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc   1516240 Nov 27 22:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc   2461994 Nov 27 22:39 log.47556149._001510.job.log.tgz.1
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc      8628 Nov 27 22:41 heartbeat.json
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc      8192 Nov 27 22:41 boinc_mmap_file
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc        29 Nov 27 22:41 wrapper_checkpoint.txt
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc        95 Nov 27 22:41 pilot_heartbeat.json
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc       819 Nov 27 22:41 pilotlog.txt
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc  11289564 Nov 27 22:42 log.47556149._001510.job.log.1
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc       353 Nov 27 22:42 output.list
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc       620 Nov 27 22:42 runtime_log
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc  13772800 Nov 27 22:42 result.tar.gz
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc      8833 Nov 27 22:42 runtime_log.err
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc       662 Nov 27 22:42 gNENDmiCPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMYIKDmqeaV3m.diag
[2025-11-27 22:42:05] -rw-r--r--. 1 boinc boinc     21445 Nov 27 22:42 stderr.txt
[2025-11-27 22:42:05] HITS file was successfully produced:
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc 931088709 Nov 27 22:38 shared/HITS.pool.root.1
[2025-11-27 22:42:05]  *** Contents of shared directory: ***
[2025-11-27 22:42:05] total 1323796
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc 410087965 Nov 26 23:04 ATLAS.root_0
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:04 start_atlas.sh
[2025-11-27 22:42:05] -rw-r--r--. 2 boinc boinc    590105 Nov 26 23:04 input.tar.gz
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc 931088709 Nov 27 22:38 HITS.pool.root.1
[2025-11-27 22:42:05] -rw-------. 1 boinc boinc  13772800 Nov 27 22:42 result.tar.gz
22:42:06 (32374): run_atlas exited; CPU time 319118.830776
22:42:06 (32374): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN