Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:07 (3339786): wrapper (7.7.26015): starting
18:02:07 (3339786): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 18:02:07] Arguments: --nthreads 8
[2025-11-24 18:02:07] Threads: 8
[2025-11-24 18:02:07] Checking for CVMFS
[2025-11-24 18:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:02:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:02:08] 2.13.3.0 11600 27756 332080 153261 3 173 20023439 32935936 23293 16776704 0 111980327 99.602 111987238 39162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 18:02:08] CVMFS is ok
[2025-11-24 18:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:02:08] Further information can be found at the LHC@home message board.
[2025-11-24 18:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:02:08] Checking for apptainer binary...
[2025-11-24 18:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:02:08] Running /usr/bin/apptainer --version
[2025-11-24 18:02:08] apptainer version 1.4.4-1.el9
[2025-11-24 18:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:02:08] c6-2-29-4.aglt2.org
[2025-11-24 18:02:08] apptainer works
[2025-11-24 18:02:08] Set ATHENA_PROC_NUMBER=8
[2025-11-24 18:02:08] Set ATHENA_CORE_NUMBER=8
[2025-11-24 18:02:08] Starting ATLAS job with PandaID=6895358606
[2025-11-24 18:02:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:40:09 (3339786): BOINC client no longer exists - exiting
05:40:09 (3339786): timer handler: client dead, exiting
05:49:23 (1251592): wrapper (7.7.26015): starting
05:49:23 (1251592): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:49:23] Arguments: --nthreads 8
[2025-11-25 05:49:23] Threads: 8
[2025-11-25 05:49:23] This job has been restarted, cleaning up previous attempt
[2025-11-25 05:49:23] Checking for CVMFS
[2025-11-25 05:49:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:49:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:49:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:49:24] 2.13.3.0 11600 28464 332536 153279 1 129 29038115 32935936 21540 16776704 0 114254687 99.599 115121392 39108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 05:49:24] CVMFS is ok
[2025-11-25 05:49:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:49:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:49:24] Further information can be found at the LHC@home message board.
[2025-11-25 05:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:49:24] Checking for apptainer binary...
[2025-11-25 05:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:49:24] Running /usr/bin/apptainer --version
[2025-11-25 05:49:24] apptainer version 1.4.4-1.el9
[2025-11-25 05:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:49:24] c6-2-29-4.aglt2.org
[2025-11-25 05:49:24] apptainer works
[2025-11-25 05:49:24] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:49:24] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:49:24] Starting ATLAS job with PandaID=6895358606
[2025-11-25 05:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:00:09 (1251592): BOINC client no longer exists - exiting
13:00:09 (1251592): timer handler: client dead, exiting
13:11:32 (2578794): wrapper (7.7.26015): starting
13:11:32 (2578794): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 13:11:32] Arguments: --nthreads 9
[2025-11-25 13:11:32] Threads: 9
[2025-11-25 13:11:32] This job has been restarted, cleaning up previous attempt
[2025-11-25 13:11:32] Checking for CVMFS
[2025-11-25 13:11:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:11:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:11:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:11:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:11:33] 2.13.3.0 11600 28906 328708 153292 0 110 17835663 32935937 21439 16776704 0 115605581 99.599 116790848 39014 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:11:33] CVMFS is ok
[2025-11-25 13:11:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:11:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:11:33] Further information can be found at the LHC@home message board.
[2025-11-25 13:11:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:11:33] Checking for apptainer binary...
[2025-11-25 13:11:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:11:33] Running /usr/bin/apptainer --version
[2025-11-25 13:11:33] apptainer version 1.4.4-1.el9
[2025-11-25 13:11:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:11:33] c6-2-29-4.aglt2.org
[2025-11-25 13:11:33] apptainer works
[2025-11-25 13:11:33] Set ATHENA_PROC_NUMBER=9
[2025-11-25 13:11:33] Set ATHENA_CORE_NUMBER=9
[2025-11-25 13:11:33] Starting ATLAS job with PandaID=6895358606
[2025-11-25 13:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:13:24]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:13:24] 2025-11-26 15:12:50,810 | INFO     | sum of square deviations: 591208812150.5938
[2025-11-26 10:13:24] 2025-11-26 15:12:50,838 | INFO     | sum of deviations: 4726559359015.39
[2025-11-26 10:13:24] 2025-11-26 15:12:50,838 | INFO     | mean x: 1764132130.1870968
[2025-11-26 10:13:24] 2025-11-26 15:12:50,839 | INFO     | mean y: 3082115.0241935486
[2025-11-26 10:13:24] 2025-11-26 15:12:50,839 | INFO     | intersect: -14100691474.114458
[2025-11-26 10:13:24] 2025-11-26 15:12:50,840 | INFO     | chi2: 7.575904614333419
[2025-11-26 10:13:24] 2025-11-26 15:12:50,842 | INFO     | sum of square deviations: 584086866914.345
[2025-11-26 10:13:24] 2025-11-26 15:12:50,868 | INFO     | sum of deviations: 5202503913341.892
[2025-11-26 10:13:24] 2025-11-26 15:12:50,868 | INFO     | mean x: 1764131977.6979756
[2025-11-26 10:13:24] 2025-11-26 15:12:50,868 | INFO     | mean y: 3092305.5198380565
[2025-11-26 10:13:24] 2025-11-26 15:12:50,868 | INFO     | intersect: -15710158646.536251
[2025-11-26 10:13:24] 2025-11-26 15:12:50,870 | INFO     | chi2: 3.9692258222155656
[2025-11-26 10:13:24] 2025-11-26 15:12:50,870 | INFO     | current chi2=3.9692258222155656 (change=47.60723604273091 %)
[2025-11-26 10:13:24] 2025-11-26 15:12:50,871 | INFO     | sum of square deviations: 577022364615.3019
[2025-11-26 10:13:24] 2025-11-26 15:12:50,898 | INFO     | sum of deviations: 5437962278963.472
[2025-11-26 10:13:24] 2025-11-26 15:12:50,898 | INFO     | mean x: 1764131825.2089431
[2025-11-26 10:13:24] 2025-11-26 15:12:50,898 | INFO     | mean y: 3097386.9203252033
[2025-11-26 10:13:24] 2025-11-26 15:12:50,898 | INFO     | intersect: -16622397409.977211
[2025-11-26 10:13:24] 2025-11-26 15:12:50,900 | INFO     | chi2: 2.8605207461419604
[2025-11-26 10:13:24] 2025-11-26 15:12:50,900 | INFO     | current chi2=2.8605207461419604 (change=27.93252704011539 %)
[2025-11-26 10:13:24] 2025-11-26 15:12:50,901 | INFO     | sum of square deviations: 570014697805.1406
[2025-11-26 10:13:24] 2025-11-26 15:12:50,927 | INFO     | sum of deviations: 5439525347134.906
[2025-11-26 10:13:24] 2025-11-26 15:12:50,927 | INFO     | mean x: 1764131672.7159183
[2025-11-26 10:13:24] 2025-11-26 15:12:50,927 | INFO     | mean y: 3097418.3991836733
[2025-11-26 10:13:24] 2025-11-26 15:12:50,928 | INFO     | intersect: -16831624539.42328
[2025-11-26 10:13:24] 2025-11-26 15:12:50,929 | INFO     | chi2: 2.7629699280406173
[2025-11-26 10:13:24] 2025-11-26 15:12:50,929 | INFO     | current chi2=2.7629699280406173 (change=3.410246831207633 %)
[2025-11-26 10:13:24] 2025-11-26 15:12:50,929 | INFO     | right removable region: 1224
[2025-11-26 10:13:24] 2025-11-26 15:12:50,931 | INFO     | sum of square deviations: 584084985317.1344
[2025-11-26 10:13:24] 2025-11-26 15:12:50,958 | INFO     | sum of deviations: 4389654953360.5234
[2025-11-26 10:13:24] 2025-11-26 15:12:50,958 | INFO     | mean x: 1764132282.6963563
[2025-11-26 10:13:24] 2025-11-26 15:12:50,958 | INFO     | mean y: 3089319.204048583
[2025-11-26 10:13:24] 2025-11-26 15:12:50,958 | INFO     | intersect: -13255138862.978426
[2025-11-26 10:13:24] 2025-11-26 15:12:50,960 | INFO     | chi2: 5.6315701732080985
[2025-11-26 10:13:24] 2025-11-26 15:12:50,960 | INFO     | current chi2=5.6315701732080985 (change=25.66471649401036 %)
[2025-11-26 10:13:24] 2025-11-26 15:12:50,961 | INFO     | sum of square deviations: 577018827559.1881
[2025-11-26 10:13:24] 2025-11-26 15:12:50,988 | INFO     | sum of deviations: 4253157172134.2944
[2025-11-26 10:13:24] 2025-11-26 15:12:50,988 | INFO     | mean x: 1764132435.203252
[2025-11-26 10:13:24] 2025-11-26 15:12:50,989 | INFO     | mean y: 3092265.074796748
[2025-11-26 10:13:24] 2025-11-26 15:12:50,989 | INFO     | intersect: -13000179311.206327
[2025-11-26 10:13:24] 2025-11-26 15:12:50,990 | INFO     | chi2: 5.520655661501698
[2025-11-26 10:13:24] 2025-11-26 15:12:50,990 | INFO     | current chi2=5.520655661501698 (change=1.9695130895122308 %)
[2025-11-26 10:13:24] 2025-11-26 15:12:50,990 | INFO     | left removable region: 20
[2025-11-26 10:13:24] 2025-11-26 15:12:50,992 | INFO     | sum of square deviations: 541196481754.7468
[2025-11-26 10:13:24] 2025-11-26 15:12:51,017 | INFO     | sum of deviations: 4714036957775.321
[2025-11-26 10:13:24] 2025-11-26 15:12:51,017 | INFO     | mean x: 1764132252.248339
[2025-11-26 10:13:24] 2025-11-26 15:12:51,017 | INFO     | mean y: 3113129.534053156
[2025-11-26 10:13:24] 2025-11-26 15:12:51,017 | INFO     | intersect: -15363181582.024546
[2025-11-26 10:13:24] 2025-11-26 15:12:51,019 | INFO     | chi2: 0.5550769672956395
[2025-11-26 10:13:24] 2025-11-26 15:12:51,019 | INFO     | current memory leak: 8.71 B/s (using 1204 data points, chi2=0.56)
[2025-11-26 10:13:24] 2025-11-26 15:12:51,021 | INFO     | could have reported an average CPU frequency of 2919 MHz (45 samples)
[2025-11-26 10:13:24] 2025-11-26 15:12:51,021 | INFO     | ..............................
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . Timing measurements:
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . get job = 0 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . initial setup = 1 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . payload setup = 7 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . stage-in = 0 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . payload execution = 75621 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . stage-out = 5 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | . log creation = 1 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,022 | INFO     | ..............................
[2025-11-26 10:13:24] 2025-11-26 15:12:51,132 | INFO     | 
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | job summary report
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | --------------------------------------------------
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | PanDA job id: 6895358606
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | task id: 47556137
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | errors: (none)
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | pilot state: finished 
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | transexitcode: 0
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | exeerrorcode: 0
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | exeerrordiag: 
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | exitcode: 0
[2025-11-26 10:13:24] 2025-11-26 15:12:51,133 | INFO     | exitmsg: OK
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | cpuconsumptiontime: 253840 s
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | nevents: 1000
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | neventsw: 0
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | pid: 2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | pgrp: 2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | corecount: 9
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | event service: False
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 75632: 2344879, 75638: 2353873, 75639: 2353929, 75649: 2354303}
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | --------------------------------------------------
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | 
[2025-11-26 10:13:24] 2025-11-26 15:12:51,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 10:13:24] 2025-11-26 15:12:51,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:13:24] 2025-11-26 15:12:51,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:13:24] 2025-11-26 15:12:51,203 | INFO     | job 6895358606 has completed (purged errors)
[2025-11-26 10:13:24] 2025-11-26 15:12:51,203 | INFO     | overall cleanup function is called
[2025-11-26 10:13:24] 2025-11-26 15:12:52,232 | INFO     | --- collectZombieJob: --- 10, [2618538]
[2025-11-26 10:13:24] 2025-11-26 15:12:52,232 | INFO     | zombie collector waiting for pid 2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:52,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:13:24] 2025-11-26 15:12:52,232 | INFO     | collected zombie processes
[2025-11-26 10:13:24] 2025-11-26 15:12:52,232 | INFO     | will attempt to kill all subprocesses of pid=2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:53,430 | INFO     | process IDs to be killed: [2618538] (in reverse order)
[2025-11-26 10:13:24] 2025-11-26 15:12:53,645 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:13:24] 2025-11-26 15:12:53,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:13:24] 2025-11-26 15:12:53,687 | INFO     | did not find any defunct processes belonging to 2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:53,714 | INFO     | did not find any defunct processes belonging to 2618538
[2025-11-26 10:13:24] 2025-11-26 15:12:53,716 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:13:24] 2025-11-26 15:12:53,726 | INFO     | ready for new job
[2025-11-26 10:13:24] 2025-11-26 15:12:53,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:13:24] 2025-11-26 15:12:53,733 | INFO     | ***************************************
[2025-11-26 10:13:24] 2025-11-26 15:12:53,733 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:13:24] 2025-11-26 15:12:53,733 | INFO     | ***************************************
[2025-11-26 10:13:24] 2025-11-26 15:12:53,733 | INFO     | 
[2025-11-26 10:13:24] 2025-11-26 15:12:53,737 | INFO     | architecture information:
[2025-11-26 10:13:24] 2025-11-26 15:12:53,739 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:13:24] 2025-11-26 15:12:53,758 | INFO     | cat /etc/os-release:
[2025-11-26 10:13:24] NAME="CentOS Linux"
[2025-11-26 10:13:24] VERSION="7 (Core)"
[2025-11-26 10:13:24] ID="centos"
[2025-11-26 10:13:24] ID_LIKE="rhel fedora"
[2025-11-26 10:13:24] VERSION_ID="7"
[2025-11-26 10:13:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:13:24] ANSI_COLOR="0;31"
[2025-11-26 10:13:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:13:24] HOME_URL="https://www.centos.org/"
[2025-11-26 10:13:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:13:24] 
[2025-11-26 10:13:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:13:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:13:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:13:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:13:24] 
[2025-11-26 10:13:24] 2025-11-26 15:12:53,759 | INFO     | ***************************************
[2025-11-26 10:13:24] 2025-11-26 15:12:54,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 10:13:24] 2025-11-26 15:12:54,351 | INFO     | sufficient remaining disk space (68076699648 B)
[2025-11-26 10:13:24] 2025-11-26 15:12:54,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:13:24] 2025-11-26 15:12:54,352 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:13:24] 2025-11-26 15:12:54,352 | INFO     | update_server=False
[2025-11-26 10:13:24] 2025-11-26 15:12:54,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:13:24] 2025-11-26 15:12:54,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:13:24] 2025-11-26 15:12:54,480 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 10:13:24] 2025-11-26 15:12:54,480 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 10:13:24] 2025-11-26 15:12:54,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:13:24] 2025-11-26 15:12:54,481 | INFO     | will abort loop
[2025-11-26 10:13:24] 2025-11-26 15:12:55,020 | INFO     | all payload control threads have been joined
[2025-11-26 10:13:24] 2025-11-26 15:12:55,364 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:55,400 | INFO     | all data control threads have been joined
[2025-11-26 10:13:24] 2025-11-26 15:12:55,464 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:55,486 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:55,487 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:55,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:13:24] 2025-11-26 15:12:55,758 | INFO     | all job control threads have been joined
[2025-11-26 10:13:24] 2025-11-26 15:12:56,027 | INFO     | [payload] control thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,072 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,095 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,108 | INFO     | [job] validate thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,119 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:13:24] 2025-11-26 15:12:56,301 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,368 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,408 | INFO     | [data] control thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:56,763 | INFO     | [job] control thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:57,164 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:12:59,703 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:13:00,393 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:13:24] 2025-11-26 15:13:05,372 | INFO     | job.realtimelogging is not enabled
[2025-11-26 10:13:24] 2025-11-26 15:13:06,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:13:24] 2025-11-26 15:13:08,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802039543616)>', '<ExcThread(monitor, started 139801680389888)>']
[2025-11-26 10:13:24] 2025-11-26 15:13:13,333 | INFO     | all workflow threads have been joined
[2025-11-26 10:13:24] 2025-11-26 15:13:13,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:13:24] 2025-11-26 15:13:13,334 | INFO     | traces error code: 0
[2025-11-26 10:13:24] 2025-11-26 15:13:13,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:13:24] 2025-11-26 15:13:23,616 | INFO     | PID=2593667 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:13:24] 2025-11-26 15:13:23,619 | INFO     | .. there are 31 such processes running
[2025-11-26 10:13:24] 2025-11-26 15:13:23,622 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:13:24] 2025-11-26 15:13:23,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:13:24] 2025-11-26 15:13:23,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:13:24] 2025-11-26 15:13:23,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:13:24] 2025-11-26 15:13:23,622 | INFO     | [monitor] control thread has ended
[2025-11-26 10:13:24] 2025-11-26 15:13:23,950 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:13:24] 2025-11-26 15:13:23,953 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:13:24] 2025-11-26 15:13:23,955 [wrapper] pilotpid: 2593667
[2025-11-26 10:13:24] 2025-11-26 15:13:23,958 [wrapper] Pilot exit status: 0
[2025-11-26 10:13:24] 2025-11-26 15:13:23,973 [wrapper] pandaids: 6895358606 6895358606 6895358606
[2025-11-26 10:13:24] 2025-11-26 15:13:24,049 [wrapper] cleanup supervisor_pilot 2385317 2593668
[2025-11-26 10:13:24] 2025-11-26 15:13:24,053 [wrapper] Test setup, not cleaning
[2025-11-26 10:13:24] 2025-11-26 15:13:24,055 [wrapper] apfmon messages muted
[2025-11-26 10:13:24] 2025-11-26 15:13:24,058 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:13:24] 2025-11-26 15:13:24,061 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:13:24]  *** Error codes and diagnostics ***
[2025-11-26 10:13:24]     "exeErrorCode": 0,
[2025-11-26 10:13:24]     "exeErrorDiag": "",
[2025-11-26 10:13:24]     "pilotErrorCode": 0,
[2025-11-26 10:13:24]     "pilotErrorDiag": "",
[2025-11-26 10:13:24]  *** Listing of results directory ***
[2025-11-26 10:13:24] total 1724000
[2025-11-26 10:13:24] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 07:50 pilot3.tar.gz
[2025-11-26 10:13:24] -rwx------. 1 boincer umatlas     36292 Nov 23 07:59 runpilot2-wrapper.sh
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 07:59 queuedata.json
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas       100 Nov 24 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:13:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 18:02 run_atlas
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas       105 Nov 24 18:02 job.xml
[2025-11-26 10:13:24] -rw-r--r--. 3 boincer umatlas 407983507 Nov 24 18:02 EVNT.47483658._000737.pool.root.1
[2025-11-26 10:13:24] -rw-r--r--. 3 boincer umatlas 407983507 Nov 24 18:02 ATLAS.root_0
[2025-11-26 10:13:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:02 input.tar.gz
[2025-11-26 10:13:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:02 start_atlas.sh
[2025-11-26 10:13:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 18:02 shared
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas         0 Nov 24 18:02 boinc_lockfile
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 13:11 pandaJob.out
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas        57 Nov 25 13:11 setup.sh.local
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas    991543 Nov 25 13:11 agis_schedconf.cvmfs.json
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas       534 Nov 26 10:00 boinc_task_state.xml
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 10:09 init_data.xml
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas 921395715 Nov 26 10:11 HITS.47556137._007329.pool.root.1
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas      1069 Nov 26 10:12 memory_monitor_summary.json
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas   2438443 Nov 26 10:12 log.47556137._007329.job.log.tgz.1
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas      8640 Nov 26 10:12 heartbeat.json
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:13 boinc_mmap_file
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas        30 Nov 26 10:13 wrapper_checkpoint.txt
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas        96 Nov 26 10:13 pilot_heartbeat.json
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas       823 Nov 26 10:13 pilotlog.txt
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas   9607275 Nov 26 10:13 log.47556137._007329.job.log.1
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas       353 Nov 26 10:13 output.list
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:13 runtime_log
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas  12062720 Nov 26 10:13 result.tar.gz
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas      9433 Nov 26 10:13 runtime_log.err
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas       915 Nov 26 10:13 bHgLDm7rOh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtXIKDmFuTjZn.diag
[2025-11-26 10:13:24] -rw-r--r--. 1 boincer umatlas     25724 Nov 26 10:13 stderr.txt
[2025-11-26 10:13:24] HITS file was successfully produced:
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas 921395715 Nov 26 10:11 shared/HITS.pool.root.1
[2025-11-26 10:13:24]  *** Contents of shared directory: ***
[2025-11-26 10:13:24] total 1310608
[2025-11-26 10:13:24] -rw-r--r--. 3 boincer umatlas 407983507 Nov 24 18:02 ATLAS.root_0
[2025-11-26 10:13:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:02 input.tar.gz
[2025-11-26 10:13:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:02 start_atlas.sh
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas 921395715 Nov 26 10:11 HITS.pool.root.1
[2025-11-26 10:13:24] -rw-------. 1 boincer umatlas  12062720 Nov 26 10:13 result.tar.gz
10:13:25 (2578794): run_atlas exited; CPU time 255544.877595
10:13:25 (2578794): called boinc_finish(0)

</stderr_txt>
]]>

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