Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:14 (31371): wrapper (7.7.26015): starting
15:12:14 (31371): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 15:12:14] Arguments: --nthreads 8
[2025-11-24 15:12:14] Threads: 8
[2025-11-24 15:12:14] Checking for CVMFS
[2025-11-24 15:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:12:15] 2.11.2.0 5808 167956 107280 153257 0 104 14715260 18432000 2801 130560 0 110705726 99.943 8925246 6921 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-24 15:12:15] CVMFS is ok
[2025-11-24 15:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:12:15] Further information can be found at the LHC@home message board.
[2025-11-24 15:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:12:15] Checking for apptainer binary...
[2025-11-24 15:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:12:15] Running /usr/bin/apptainer --version
[2025-11-24 15:12:15] apptainer version 1.3.2-1.el7
[2025-11-24 15:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:12:16] c-9-34.aglt2.org
[2025-11-24 15:12:16] apptainer works
[2025-11-24 15:12:16] Set ATHENA_PROC_NUMBER=8
[2025-11-24 15:12:16] Set ATHENA_CORE_NUMBER=8
[2025-11-24 15:12:16] Starting ATLAS job with PandaID=6895372992
[2025-11-24 15:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:55:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:55:40] 2025-11-25 13:55:06,207 | INFO     | time since job start (63759s) is within the limit (172800.0s)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,148 | INFO     | monitor loop #4409: job 0:6895372992 is in state 'finished'
[2025-11-25 08:55:40] 2025-11-25 13:55:07,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,290 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 08:55:40] 2025-11-25 13:55:07,298 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9069687500014
[2025-11-25 08:55:40] 2025-11-25 13:55:07,304 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895372992/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,305 | INFO     | extracted standard info from prmon json
[2025-11-25 08:55:40] 2025-11-25 13:55:07,305 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 08:55:40] 2025-11-25 13:55:07,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 08:55:40] 2025-11-25 13:55:07,332 | INFO     | fitting pss+swap vs Time
[2025-11-25 08:55:40] 2025-11-25 13:55:07,334 | INFO     | sum of square deviations: 353856955094.676
[2025-11-25 08:55:40] 2025-11-25 13:55:07,362 | INFO     | sum of deviations: 1854540011398.7412
[2025-11-25 08:55:40] 2025-11-25 13:55:07,362 | INFO     | mean x: 1764047016.676555
[2025-11-25 08:55:40] 2025-11-25 13:55:07,362 | INFO     | mean y: 2871032.6057416266
[2025-11-25 08:55:40] 2025-11-25 13:55:07,363 | INFO     | intersect: -9242378290.075933
[2025-11-25 08:55:40] 2025-11-25 13:55:07,364 | INFO     | chi2: 4.9782237744504885
[2025-11-25 08:55:40] 2025-11-25 13:55:07,365 | INFO     | sum of square deviations: 348802155017.3767
[2025-11-25 08:55:40] 2025-11-25 13:55:07,397 | INFO     | sum of deviations: 2124435383918.0308
[2025-11-25 08:55:40] 2025-11-25 13:55:07,397 | INFO     | mean x: 1764046864.1798077
[2025-11-25 08:55:40] 2025-11-25 13:55:07,397 | INFO     | mean y: 2879170.144230769
[2025-11-25 08:55:40] 2025-11-25 13:55:07,398 | INFO     | intersect: -10741330758.73803
[2025-11-25 08:55:40] 2025-11-25 13:55:07,399 | INFO     | chi2: 2.9320969044563916
[2025-11-25 08:55:40] 2025-11-25 13:55:07,399 | INFO     | current chi2=2.9320969044563916 (change=41.10154470145237 %)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,401 | INFO     | sum of square deviations: 343795727940.054
[2025-11-25 08:55:40] 2025-11-25 13:55:07,435 | INFO     | sum of deviations: 2276095885825.9214
[2025-11-25 08:55:40] 2025-11-25 13:55:07,436 | INFO     | mean x: 1764046711.6830919
[2025-11-25 08:55:40] 2025-11-25 13:55:07,436 | INFO     | mean y: 2883787.749758454
[2025-11-25 08:55:40] 2025-11-25 13:55:07,436 | INFO     | intersect: -11675968322.846367
[2025-11-25 08:55:40] 2025-11-25 13:55:07,437 | INFO     | chi2: 2.2088003467972026
[2025-11-25 08:55:40] 2025-11-25 13:55:07,437 | INFO     | current chi2=2.2088003467972026 (change=24.668235096864493 %)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,438 | INFO     | right removable region: 1034
[2025-11-25 08:55:40] 2025-11-25 13:55:07,439 | INFO     | sum of square deviations: 348801787248.7348
[2025-11-25 08:55:40] 2025-11-25 13:55:07,473 | INFO     | sum of deviations: 1613451177874.3784
[2025-11-25 08:55:40] 2025-11-25 13:55:07,474 | INFO     | mean x: 1764047169.1788461
[2025-11-25 08:55:40] 2025-11-25 13:55:07,474 | INFO     | mean y: 2878294.6807692307
[2025-11-25 08:55:40] 2025-11-25 13:55:07,474 | INFO     | intersect: -8157068377.002737
[2025-11-25 08:55:40] 2025-11-25 13:55:07,475 | INFO     | chi2: 3.2213971664639995
[2025-11-25 08:55:40] 2025-11-25 13:55:07,476 | INFO     | current chi2=3.2213971664639995 (change=35.29022976032075 %)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,477 | INFO     | sum of square deviations: 343795056209.1442
[2025-11-25 08:55:40] 2025-11-25 13:55:07,510 | INFO     | sum of deviations: 1526832744159.1865
[2025-11-25 08:55:40] 2025-11-25 13:55:07,510 | INFO     | mean x: 1764047321.6801932
[2025-11-25 08:55:40] 2025-11-25 13:55:07,510 | INFO     | mean y: 2880932.486956522
[2025-11-25 08:55:40] 2025-11-25 13:55:07,510 | INFO     | intersect: -7831452820.553189
[2025-11-25 08:55:40] 2025-11-25 13:55:07,512 | INFO     | chi2: 3.1197954824064844
[2025-11-25 08:55:40] 2025-11-25 13:55:07,512 | INFO     | current chi2=3.1197954824064844 (change=3.153963290066443 %)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,512 | INFO     | left removable region: 20
[2025-11-25 08:55:40] 2025-11-25 13:55:07,513 | INFO     | sum of square deviations: 323290558505.0231
[2025-11-25 08:55:40] 2025-11-25 13:55:07,545 | INFO     | sum of deviations: 1836639419980.782
[2025-11-25 08:55:40] 2025-11-25 13:55:07,545 | INFO     | mean x: 1764047291.1883628
[2025-11-25 08:55:40] 2025-11-25 13:55:07,545 | INFO     | mean y: 2898593.3205128205
[2025-11-25 08:55:40] 2025-11-25 13:55:07,545 | INFO     | intersect: -10018794612.596369
[2025-11-25 08:55:40] 2025-11-25 13:55:07,547 | INFO     | chi2: 0.20429874839505427
[2025-11-25 08:55:40] 2025-11-25 13:55:07,547 | INFO     | current memory leak: 5.68 B/s (using 1014 data points, chi2=0.20)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,548 | INFO     | could have reported an average CPU frequency of 2999 MHz (38 samples)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,548 | INFO     | ..............................
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . Timing measurements:
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . get job = 0 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . initial setup = 2 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . payload setup = 5 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . stage-in = 0 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,549 | INFO     | . payload execution = 63723 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,550 | INFO     | . stage-out = 4 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,550 | INFO     | . log creation = 0 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,550 | INFO     | ..............................
[2025-11-25 08:55:40] 2025-11-25 13:55:07,698 | INFO     | 
[2025-11-25 08:55:40] 2025-11-25 13:55:07,698 | INFO     | job summary report
[2025-11-25 08:55:40] 2025-11-25 13:55:07,698 | INFO     | --------------------------------------------------
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | PanDA job id: 6895372992
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | task id: 47556137
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | errors: (none)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | pilot state: finished 
[2025-11-25 08:55:40] 2025-11-25 13:55:07,699 | INFO     | transexitcode: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | exeerrorcode: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | exeerrordiag: 
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | exitcode: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | exitmsg: OK
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | cpuconsumptiontime: 488201 s
[2025-11-25 08:55:40] 2025-11-25 13:55:07,700 | INFO     | nevents: 1000
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | neventsw: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | pid: 43258
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | pgrp: 43258
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | corecount: 8
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | event service: False
[2025-11-25 08:55:40] 2025-11-25 13:55:07,701 | INFO     | sizes: {0: 2284138, 1: 2284337, 4: 2284599, 12: 2284627, 63732: 2338869, 63737: 2347868, 63740: 2348052, 63745: 2348298}
[2025-11-25 08:55:40] 2025-11-25 13:55:07,702 | INFO     | --------------------------------------------------
[2025-11-25 08:55:40] 2025-11-25 13:55:07,702 | INFO     | 
[2025-11-25 08:55:40] 2025-11-25 13:55:07,702 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 08:55:40] 2025-11-25 13:55:07,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | job 6895372992 has completed (purged errors)
[2025-11-25 08:55:40] 2025-11-25 13:55:07,758 | INFO     | overall cleanup function is called
[2025-11-25 08:55:40] 2025-11-25 13:55:08,771 | INFO     | --- collectZombieJob: --- 10, [43258]
[2025-11-25 08:55:40] 2025-11-25 13:55:08,771 | INFO     | zombie collector waiting for pid 43258
[2025-11-25 08:55:40] 2025-11-25 13:55:08,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:55:40] 2025-11-25 13:55:08,771 | INFO     | collected zombie processes
[2025-11-25 08:55:40] 2025-11-25 13:55:08,771 | INFO     | will attempt to kill all subprocesses of pid=43258
[2025-11-25 08:55:40] 2025-11-25 13:55:09,084 | INFO     | process IDs to be killed: [43258] (in reverse order)
[2025-11-25 08:55:40] 2025-11-25 13:55:09,160 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:55:40] 2025-11-25 13:55:09,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:55:40] 2025-11-25 13:55:09,172 | INFO     | did not find any defunct processes belonging to 43258
[2025-11-25 08:55:40] 2025-11-25 13:55:09,182 | INFO     | did not find any defunct processes belonging to 43258
[2025-11-25 08:55:40] 2025-11-25 13:55:09,184 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:55:40] 2025-11-25 13:55:09,184 | INFO     | ready for new job
[2025-11-25 08:55:40] 2025-11-25 13:55:09,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:55:40] 2025-11-25 13:55:09,189 | INFO     | ***************************************
[2025-11-25 08:55:40] 2025-11-25 13:55:09,189 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:55:40] 2025-11-25 13:55:09,189 | INFO     | ***************************************
[2025-11-25 08:55:40] 2025-11-25 13:55:09,189 | INFO     | 
[2025-11-25 08:55:40] 2025-11-25 13:55:09,190 | INFO     | architecture information:
[2025-11-25 08:55:40] 2025-11-25 13:55:09,190 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:55:40] 2025-11-25 13:55:09,200 | INFO     | cat /etc/os-release:
[2025-11-25 08:55:40] NAME="CentOS Linux"
[2025-11-25 08:55:40] VERSION="7 (Core)"
[2025-11-25 08:55:40] ID="centos"
[2025-11-25 08:55:40] ID_LIKE="rhel fedora"
[2025-11-25 08:55:40] VERSION_ID="7"
[2025-11-25 08:55:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:55:40] ANSI_COLOR="0;31"
[2025-11-25 08:55:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:55:40] HOME_URL="https://www.centos.org/"
[2025-11-25 08:55:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:55:40] 
[2025-11-25 08:55:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:55:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:55:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:55:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:55:40] 
[2025-11-25 08:55:40] 2025-11-25 13:55:09,200 | INFO     | ***************************************
[2025-11-25 08:55:40] 2025-11-25 13:55:09,703 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 08:55:40] 2025-11-25 13:55:09,718 | INFO     | sufficient remaining disk space (100486086656 B)
[2025-11-25 08:55:40] 2025-11-25 13:55:09,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:55:40] 2025-11-25 13:55:09,718 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:55:40] 2025-11-25 13:55:09,718 | INFO     | update_server=False
[2025-11-25 08:55:40] 2025-11-25 13:55:09,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:55:40] 2025-11-25 13:55:09,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:55:40] 2025-11-25 13:55:10,093 | INFO     | all job control threads have been joined
[2025-11-25 08:55:40] 2025-11-25 13:55:10,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:55:40] 2025-11-25 13:55:10,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:55:40] 2025-11-25 13:55:10,658 | INFO     | aborting loop
[2025-11-25 08:55:40] 2025-11-25 13:55:10,703 | INFO     | all payload control threads have been joined
[2025-11-25 08:55:40] 2025-11-25 13:55:10,707 | INFO     | all data control threads have been joined
[2025-11-25 08:55:40] 2025-11-25 13:55:10,724 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:10,918 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,071 | INFO     | [job] validate thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,095 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,099 | INFO     | [job] control thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,156 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,170 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,344 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,664 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,709 | INFO     | [data] control thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:11,709 | INFO     | [payload] control thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:12,005 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:12,269 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:12,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:55:40] 2025-11-25 13:55:13,720 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:13,723 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:55:40] 2025-11-25 13:55:13,725 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:55:40] 2025-11-25 13:55:15,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092678661952)>', '<ExcThread(monitor, started 140092094015232)>']
[2025-11-25 08:55:40] 2025-11-25 13:55:20,050 | INFO     | all workflow threads have been joined
[2025-11-25 08:55:40] 2025-11-25 13:55:20,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:55:40] 2025-11-25 13:55:20,050 | INFO     | traces error code: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:20,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:55:40] 2025-11-25 13:55:39,655 | INFO     | PID=35299 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 08:55:40] 2025-11-25 13:55:39,655 | INFO     | .. there are 4 such processes running
[2025-11-25 08:55:40] 2025-11-25 13:55:39,656 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:55:40] 2025-11-25 13:55:39,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:55:40] 2025-11-25 13:55:39,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:55:40] 2025-11-25 13:55:39,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:55:40] 2025-11-25 13:55:39,656 | INFO     | [monitor] control thread has ended
[2025-11-25 08:55:40] 2025-11-25 13:55:39,786 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:55:40] 2025-11-25 13:55:39,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:55:40] 2025-11-25 13:55:39,791 [wrapper] pilotpid: 35299
[2025-11-25 08:55:40] 2025-11-25 13:55:39,793 [wrapper] Pilot exit status: 0
[2025-11-25 08:55:40] 2025-11-25 13:55:39,802 [wrapper] pandaids: 6895372992
[2025-11-25 08:55:40] 2025-11-25 13:55:39,880 [wrapper] cleanup supervisor_pilot 44586 35300
[2025-11-25 08:55:40] 2025-11-25 13:55:39,888 [wrapper] Test setup, not cleaning
[2025-11-25 08:55:40] 2025-11-25 13:55:39,891 [wrapper] apfmon messages muted
[2025-11-25 08:55:40] 2025-11-25 13:55:39,896 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:55:40] 2025-11-25 13:55:39,899 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:55:40]  *** Error codes and diagnostics ***
[2025-11-25 08:55:40]     "exeErrorCode": 0,
[2025-11-25 08:55:40]     "exeErrorDiag": "",
[2025-11-25 08:55:40]     "pilotErrorCode": 0,
[2025-11-25 08:55:40]     "pilotErrorDiag": "",
[2025-11-25 08:55:40]  *** Listing of results directory ***
[2025-11-25 08:55:40] total 1337384
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:10 pilot3.tar.gz
[2025-11-25 08:55:40] -rwx------ 1 boincer umatlas     36292 Nov 23 17:23 runpilot2-wrapper.sh
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:23 queuedata.json
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas       100 Nov 24 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:55:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 15:12 run_atlas
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas       105 Nov 24 15:12 job.xml
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas 412076982 Nov 24 15:12 EVNT.47483658._000918.pool.root.1
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:12 start_atlas.sh
[2025-11-25 08:55:40] drwxrwx--x 2 boincer umatlas      4096 Nov 24 15:12 shared
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 15:12 input.tar.gz
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas         0 Nov 24 15:12 boinc_lockfile
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 15:12 pandaJob.out
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas        57 Nov 24 15:12 setup.sh.local
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas    991801 Nov 24 15:12 agis_schedconf.cvmfs.json
[2025-11-25 08:55:40] drwx------ 5 boincer umatlas      4096 Nov 24 15:12 pilot3
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas       532 Nov 25 08:42 boinc_task_state.xml
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas      6038 Nov 25 08:54 init_data.xml
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas 931611103 Nov 25 08:54 HITS.47556137._009048.pool.root.1
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas        95 Nov 25 08:54 pilot_heartbeat.json
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas      1064 Nov 25 08:54 memory_monitor_summary.json
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas   1516240 Nov 25 08:54 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas   2234544 Nov 25 08:54 log.47556137._009048.job.log.tgz.1
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas      8647 Nov 25 08:55 heartbeat.json
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas       821 Nov 25 08:55 pilotlog.txt
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 08:55 boinc_mmap_file
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas   8703257 Nov 25 08:55 log.47556137._009048.job.log.1
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas        29 Nov 25 08:55 wrapper_checkpoint.txt
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas       353 Nov 25 08:55 output.list
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas       620 Nov 25 08:55 runtime_log
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas  10956800 Nov 25 08:55 result.tar.gz
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas      9333 Nov 25 08:55 runtime_log.err
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas       666 Nov 25 08:55 O1jNDmQfXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmInIKDmRcziNo.diag
[2025-11-25 08:55:40] -rw-r--r-- 1 boincer umatlas     21313 Nov 25 08:55 stderr.txt
[2025-11-25 08:55:40] HITS file was successfully produced:
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas 931611103 Nov 25 08:54 shared/HITS.pool.root.1
[2025-11-25 08:55:40]  *** Contents of shared directory: ***
[2025-11-25 08:55:40] total 1323504
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas 412076982 Nov 24 15:12 ATLAS.root_0
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 15:12 start_atlas.sh
[2025-11-25 08:55:40] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 15:12 input.tar.gz
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas 931611103 Nov 25 08:54 HITS.pool.root.1
[2025-11-25 08:55:40] -rw------- 1 boincer umatlas  10956800 Nov 25 08:55 result.tar.gz
08:55:41 (31371): run_atlas exited; CPU time 488541.739926
08:55:41 (31371): called boinc_finish(0)

</stderr_txt>
]]>

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