Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:24 (2383195): wrapper (7.7.26015): starting
11:46:24 (2383195): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 11:46:24] Arguments: --nthreads 4
[2025-11-27 11:46:24] Threads: 4
[2025-11-27 11:46:24] Checking for CVMFS
[2025-11-27 11:46:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:46:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:46:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:46:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:46:24] 2.9.2.0 504476 12491 103364 153360 2 81 36128955 36864000 0 130560 0 4978878 99.941 619267 4245 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 11:46:24] CVMFS is ok
[2025-11-27 11:46:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:46:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:46:24] Further information can be found at the LHC@home message board.
[2025-11-27 11:46:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:46:24] Checking for apptainer binary...
[2025-11-27 11:46:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:46:24] Running /usr/bin/apptainer --version
[2025-11-27 11:46:24] apptainer version 1.4.1-1.1
[2025-11-27 11:46:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:46:24] thA338
[2025-11-27 11:46:24] apptainer works
[2025-11-27 11:46:24] Set ATHENA_PROC_NUMBER=4
[2025-11-27 11:46:24] Set ATHENA_CORE_NUMBER=4
[2025-11-27 11:46:24] Starting ATLAS job with PandaID=6895356971
[2025-11-27 11:46:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:34:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:34:12] 2025-11-27 17:33:26,268 | INFO     | update_server=False
[2025-11-27 18:34:12] 2025-11-27 17:33:26,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:34:12] 2025-11-27 17:33:26,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:12] 2025-11-27 17:33:26,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:34:12] 2025-11-27 17:33:26,629 | INFO     | all data control threads have been joined
[2025-11-27 18:34:12] 2025-11-27 17:33:27,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:34:12] 2025-11-27 17:33:27,140 | INFO     | aborting loop
[2025-11-27 18:34:12] 2025-11-27 17:33:27,274 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:27,275 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:27,309 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:27,635 | INFO     | [data] control thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:27,664 | INFO     | all payload control threads have been joined
[2025-11-27 18:34:12] 2025-11-27 17:33:27,892 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:27,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:34:12] 2025-11-27 17:33:27,958 | INFO     | all job control threads have been joined
[2025-11-27 18:34:12] 2025-11-27 17:33:28,012 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,141 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,275 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,329 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,406 | INFO     | [job] validate thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,573 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,638 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,670 | INFO     | [payload] control thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:28,964 | INFO     | [job] control thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:31,925 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:34:12] 2025-11-27 17:33:56,606 | INFO     | PID=2386992 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:34:12] 2025-11-27 17:33:56,606 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:34:12] 2025-11-27 17:33:56,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:34:12] 2025-11-27 17:33:56,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:34:12] 2025-11-27 17:34:05,969 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:34:12] 2025-11-27 17:34:06,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042994071360)>', '<ExcThread(monitor, started 140041770759936)>']
[2025-11-27 18:34:12] 2025-11-27 17:34:07,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:34:12] 2025-11-27 17:34:07,664 | INFO     | [monitor] control thread has ended
[2025-11-27 18:34:12] 2025-11-27 17:34:11,902 | INFO     | all workflow threads have been joined
[2025-11-27 18:34:12] 2025-11-27 17:34:11,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:34:12] 2025-11-27 17:34:11,903 | INFO     | traces error code: 0
[2025-11-27 18:34:12] 2025-11-27 17:34:11,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:34:12] 2025-11-27 17:34:11,983 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:34:12] 2025-11-27 17:34:11,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:34:12] 2025-11-27 17:34:11,991 [wrapper] pilotpid: 2386992
[2025-11-27 18:34:12] 2025-11-27 17:34:11,995 [wrapper] Pilot exit status: 0
[2025-11-27 18:34:12] 2025-11-27 17:34:12,007 [wrapper] pandaids: 6895356971
[2025-11-27 18:34:12] 2025-11-27 17:34:12,031 [wrapper] cleanup supervisor_pilot 2439113 2386993
[2025-11-27 18:34:12] 2025-11-27 17:34:12,035 [wrapper] Test setup, not cleaning
[2025-11-27 18:34:12] 2025-11-27 17:34:12,039 [wrapper] apfmon messages muted
[2025-11-27 18:34:12] 2025-11-27 17:34:12,043 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:34:12] 2025-11-27 17:34:12,047 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:34:12]  *** Error codes and diagnostics ***
[2025-11-27 18:34:12]     "exeErrorCode": 0,
[2025-11-27 18:34:12]     "exeErrorDiag": "",
[2025-11-27 18:34:12]     "pilotErrorCode": 0,
[2025-11-27 18:34:12]     "pilotErrorDiag": "",
[2025-11-27 18:34:12]  *** Listing of results directory ***
[2025-11-27 18:34:12] total 1301104
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc    576529 Nov 23 12:44 pilot3.tar.gz
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      5112 Nov 23 12:44 queuedata.json
[2025-11-27 18:34:12] -rwx------ 1 boinc boinc     36292 Nov 23 12:44 runpilot2-wrapper.sh
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc       100 Nov 27 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:34:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 11:46 run_atlas
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc       105 Nov 27 11:46 job.xml
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc 410574133 Nov 27 11:46 EVNT.47483658._001158.pool.root.1
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc    590101 Nov 27 11:46 input.tar.gz
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:46 start_atlas.sh
[2025-11-27 18:34:12] drwxrwx--x 2 boinc boinc      4096 Nov 27 11:46 shared
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:46 boinc_setup_complete
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      6376 Nov 27 11:46 init_data.xml
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:46 boinc_lockfile
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      2785 Nov 27 11:46 pandaJob.out
[2025-11-27 18:34:12] -rw------- 1 boinc boinc    991564 Nov 27 11:46 agis_schedconf.cvmfs.json
[2025-11-27 18:34:12] drwx------ 5 boinc boinc      4096 Nov 27 11:46 pilot3
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc       531 Nov 27 18:29 boinc_task_state.xml
[2025-11-27 18:34:12] -rw------- 1 boinc boinc 908456089 Nov 27 18:32 HITS.47556149._001450.pool.root.1
[2025-11-27 18:34:12] -rw------- 1 boinc boinc      1028 Nov 27 18:33 memory_monitor_summary.json
[2025-11-27 18:34:12] -rw------- 1 boinc boinc   1516240 Nov 27 18:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:34:12] -rw------- 1 boinc boinc   1254684 Nov 27 18:33 log.47556149._001450.job.log.tgz.1
[2025-11-27 18:34:12] -rw------- 1 boinc boinc      8572 Nov 27 18:33 heartbeat.json
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      8192 Nov 27 18:33 boinc_mmap_file
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc        28 Nov 27 18:33 wrapper_checkpoint.txt
[2025-11-27 18:34:12] -rw------- 1 boinc boinc        95 Nov 27 18:33 pilot_heartbeat.json
[2025-11-27 18:34:12] -rw------- 1 boinc boinc      4752 Nov 27 18:34 pilotlog.txt
[2025-11-27 18:34:12] -rw------- 1 boinc boinc   3444350 Nov 27 18:34 log.47556149._001450.job.log.1
[2025-11-27 18:34:12] -rw------- 1 boinc boinc       353 Nov 27 18:34 output.list
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc       620 Nov 27 18:34 runtime_log
[2025-11-27 18:34:12] -rw------- 1 boinc boinc   4720640 Nov 27 18:34 result.tar.gz
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      8898 Nov 27 18:34 runtime_log.err
[2025-11-27 18:34:12] -rw------- 1 boinc boinc       665 Nov 27 18:34 nZ7LDmygNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPrKKDmFmjkLn.diag
[2025-11-27 18:34:12] -rw-r--r-- 1 boinc boinc      7416 Nov 27 18:34 stderr.txt
[2025-11-27 18:34:12] HITS file was successfully produced:
[2025-11-27 18:34:12] -rw------- 1 boinc boinc 908456089 Nov 27 18:32 shared/HITS.pool.root.1
[2025-11-27 18:34:12]  *** Contents of shared directory: ***
[2025-11-27 18:34:12] total 1293332
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc 410574133 Nov 27 11:46 ATLAS.root_0
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc    590101 Nov 27 11:46 input.tar.gz
[2025-11-27 18:34:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:46 start_atlas.sh
[2025-11-27 18:34:12] -rw------- 1 boinc boinc 908456089 Nov 27 18:32 HITS.pool.root.1
[2025-11-27 18:34:12] -rw------- 1 boinc boinc   4720640 Nov 27 18:34 result.tar.gz
18:34:13 (2383195): run_atlas exited; CPU time 95531.129398
18:34:13 (2383195): called boinc_finish(0)

</stderr_txt>
]]>

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