Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:30:44 (3850983): wrapper (7.7.26015): starting
17:30:44 (3850983): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:30:44] Arguments: --nthreads 8
[2025-11-24 17:30:44] Threads: 8
[2025-11-24 17:30:44] Checking for CVMFS
[2025-11-24 17:30:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:30:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:30:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:30:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:30:45] 2.13.3.0 9366 27726 339700 153261 0 166 24034333 32935936 24007 16776704 0 187937862 99.816 88848050 33162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 17:30:45] CVMFS is ok
[2025-11-24 17:30:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:30:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:30:45] Further information can be found at the LHC@home message board.
[2025-11-24 17:30:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:30:45] Checking for apptainer binary...
[2025-11-24 17:30:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:30:45] Running /usr/bin/apptainer --version
[2025-11-24 17:30:45] apptainer version 1.4.4-1.el9
[2025-11-24 17:30:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:30:45] c-6-2.aglt2.org
[2025-11-24 17:30:45] apptainer works
[2025-11-24 17:30:45] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:30:45] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:30:45] Starting ATLAS job with PandaID=6895372723
[2025-11-24 17:30:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:59:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:59:51] 2025-11-25 23:59:16,777 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:59:51] 2025-11-25 23:59:16,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:59:51] 2025-11-25 23:59:16,807 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:59:51] 2025-11-25 23:59:16,809 | INFO     | sum of square deviations: 1052776055484.3
[2025-11-25 18:59:51] 2025-11-25 23:59:16,872 | INFO     | sum of deviations: 5202997029603.532
[2025-11-25 18:59:51] 2025-11-25 23:59:16,873 | INFO     | mean x: 1764069308.3379908
[2025-11-25 18:59:51] 2025-11-25 23:59:16,873 | INFO     | mean y: 2933047.497005988
[2025-11-25 18:59:51] 2025-11-25 23:59:16,873 | INFO     | intersect: -8715395341.036715
[2025-11-25 18:59:51] 2025-11-25 23:59:16,876 | INFO     | chi2: 7.963764362367474
[2025-11-25 18:59:51] 2025-11-25 23:59:16,878 | INFO     | sum of square deviations: 1042304370152.8208
[2025-11-25 18:59:51] 2025-11-25 23:59:16,975 | INFO     | sum of deviations: 5716941054599.158
[2025-11-25 18:59:51] 2025-11-25 23:59:16,975 | INFO     | mean x: 1764069155.8424566
[2025-11-25 18:59:51] 2025-11-25 23:59:16,975 | INFO     | mean y: 2940531.487983979
[2025-11-25 18:59:51] 2025-11-25 23:59:16,975 | INFO     | intersect: -9672812222.680325
[2025-11-25 18:59:51] 2025-11-25 23:59:16,982 | INFO     | chi2: 4.793036287944023
[2025-11-25 18:59:51] 2025-11-25 23:59:16,982 | INFO     | current chi2=4.793036287944023 (change=39.814438626620216 %)
[2025-11-25 18:59:51] 2025-11-25 23:59:16,984 | INFO     | sum of square deviations: 1031902360546.2781
[2025-11-25 18:59:51] 2025-11-25 23:59:17,063 | INFO     | sum of deviations: 6068250067634.683
[2025-11-25 18:59:51] 2025-11-25 23:59:17,064 | INFO     | mean x: 1764069003.3469524
[2025-11-25 18:59:51] 2025-11-25 23:59:17,064 | INFO     | mean y: 2945677.490957803
[2025-11-25 18:59:51] 2025-11-25 23:59:17,064 | INFO     | intersect: -10370915511.474031
[2025-11-25 18:59:51] 2025-11-25 23:59:17,066 | INFO     | chi2: 2.8863975812050513
[2025-11-25 18:59:51] 2025-11-25 23:59:17,066 | INFO     | current chi2=2.8863975812050513 (change=39.77935054518075 %)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,068 | INFO     | sum of square deviations: 1021569612325.5802
[2025-11-25 18:59:51] 2025-11-25 23:59:17,209 | INFO     | sum of deviations: 6138434200223.449
[2025-11-25 18:59:51] 2025-11-25 23:59:17,209 | INFO     | mean x: 1764068850.8501344
[2025-11-25 18:59:51] 2025-11-25 23:59:17,209 | INFO     | mean y: 2946710.988575269
[2025-11-25 18:59:51] 2025-11-25 23:59:17,209 | INFO     | intersect: -10597036329.771843
[2025-11-25 18:59:51] 2025-11-25 23:59:17,211 | INFO     | chi2: 2.6579711034874216
[2025-11-25 18:59:51] 2025-11-25 23:59:17,211 | INFO     | current chi2=2.6579711034874216 (change=7.913895133679512 %)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,212 | INFO     | right removable region: 1487
[2025-11-25 18:59:51] 2025-11-25 23:59:17,214 | INFO     | sum of square deviations: 1042303143442.82
[2025-11-25 18:59:51] 2025-11-25 23:59:17,270 | INFO     | sum of deviations: 4774346319917.937
[2025-11-25 18:59:51] 2025-11-25 23:59:17,271 | INFO     | mean x: 1764069460.8424566
[2025-11-25 18:59:51] 2025-11-25 23:59:17,271 | INFO     | mean y: 2939284.2242990653
[2025-11-25 18:59:51] 2025-11-25 23:59:17,271 | INFO     | intersect: -8077510814.614764
[2025-11-25 18:59:51] 2025-11-25 23:59:17,273 | INFO     | chi2: 5.665068065527988
[2025-11-25 18:59:51] 2025-11-25 23:59:17,273 | INFO     | current chi2=5.665068065527988 (change=28.86444390170439 %)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,275 | INFO     | sum of square deviations: 1031901642288.221
[2025-11-25 18:59:51] 2025-11-25 23:59:17,330 | INFO     | sum of deviations: 4668720199987.49
[2025-11-25 18:59:51] 2025-11-25 23:59:17,330 | INFO     | mean x: 1764069613.3342264
[2025-11-25 18:59:51] 2025-11-25 23:59:17,331 | INFO     | mean y: 2940832.6363027464
[2025-11-25 18:59:51] 2025-11-25 23:59:17,331 | INFO     | intersect: -7978389073.666179
[2025-11-25 18:59:51] 2025-11-25 23:59:17,333 | INFO     | chi2: 5.628689260422066
[2025-11-25 18:59:51] 2025-11-25 23:59:17,333 | INFO     | current chi2=5.628689260422066 (change=0.6421600708963744 %)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,333 | INFO     | left removable region: 20
[2025-11-25 18:59:51] 2025-11-25 23:59:17,335 | INFO     | sum of square deviations: 978924532407.902
[2025-11-25 18:59:51] 2025-11-25 23:59:17,392 | INFO     | sum of deviations: 5445732454705.446
[2025-11-25 18:59:51] 2025-11-25 23:59:17,392 | INFO     | mean x: 1764069430.3415134
[2025-11-25 18:59:51] 2025-11-25 23:59:17,392 | INFO     | mean y: 2956802.408316292
[2025-11-25 18:59:51] 2025-11-25 23:59:17,397 | INFO     | intersect: -9810516893.602392
[2025-11-25 18:59:51] 2025-11-25 23:59:17,399 | INFO     | chi2: 0.28957367905744014
[2025-11-25 18:59:51] 2025-11-25 23:59:17,400 | INFO     | current memory leak: 5.56 B/s (using 1467 data points, chi2=0.29)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,405 | INFO     | could have reported an average CPU frequency of 2599 MHz (54 samples)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,405 | INFO     | ..............................
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . Timing measurements:
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . get job = 0 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . initial setup = 3 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . payload setup = 7 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . stage-in = 0 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . payload execution = 91643 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . stage-out = 6 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | . log creation = 1 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,406 | INFO     | ..............................
[2025-11-25 18:59:51] 2025-11-25 23:59:17,540 | INFO     | 
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | job summary report
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | --------------------------------------------------
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | PanDA job id: 6895372723
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | task id: 47556149
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | errors: (none)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | pilot state: finished 
[2025-11-25 18:59:51] 2025-11-25 23:59:17,541 | INFO     | transexitcode: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | exeerrorcode: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | exeerrordiag: 
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | exitcode: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | exitmsg: OK
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | cpuconsumptiontime: 305300 s
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | nevents: 1000
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | neventsw: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | pid: 3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | pgrp: 3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:17,542 | INFO     | corecount: 8
[2025-11-25 18:59:51] 2025-11-25 23:59:17,543 | INFO     | event service: False
[2025-11-25 18:59:51] 2025-11-25 23:59:17,543 | INFO     | sizes: {0: 2284139, 1: 2284338, 9: 2284600, 12: 2284628, 91655: 2352655, 91663: 2361654, 91666: 2361838, 91678: 2362084}
[2025-11-25 18:59:51] 2025-11-25 23:59:17,543 | INFO     | --------------------------------------------------
[2025-11-25 18:59:51] 2025-11-25 23:59:17,543 | INFO     | 
[2025-11-25 18:59:51] 2025-11-25 23:59:17,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 18:59:51] 2025-11-25 23:59:17,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:59:51] 2025-11-25 23:59:17,567 | INFO     | job 6895372723 has completed (purged errors)
[2025-11-25 18:59:51] 2025-11-25 23:59:17,567 | INFO     | overall cleanup function is called
[2025-11-25 18:59:51] 2025-11-25 23:59:18,590 | INFO     | --- collectZombieJob: --- 10, [3868706]
[2025-11-25 18:59:51] 2025-11-25 23:59:18,590 | INFO     | zombie collector waiting for pid 3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:18,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:59:51] 2025-11-25 23:59:18,590 | INFO     | collected zombie processes
[2025-11-25 18:59:51] 2025-11-25 23:59:18,590 | INFO     | will attempt to kill all subprocesses of pid=3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:19,084 | INFO     | process IDs to be killed: [3868706] (in reverse order)
[2025-11-25 18:59:51] 2025-11-25 23:59:19,238 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:59:51] 2025-11-25 23:59:19,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:59:51] 2025-11-25 23:59:19,258 | INFO     | did not find any defunct processes belonging to 3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:19,272 | INFO     | did not find any defunct processes belonging to 3868706
[2025-11-25 18:59:51] 2025-11-25 23:59:19,274 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:59:51] 2025-11-25 23:59:19,274 | INFO     | ready for new job
[2025-11-25 18:59:51] 2025-11-25 23:59:19,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:59:51] 2025-11-25 23:59:19,281 | INFO     | ***************************************
[2025-11-25 18:59:51] 2025-11-25 23:59:19,281 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:59:51] 2025-11-25 23:59:19,281 | INFO     | ***************************************
[2025-11-25 18:59:51] 2025-11-25 23:59:19,281 | INFO     | 
[2025-11-25 18:59:51] 2025-11-25 23:59:19,283 | INFO     | architecture information:
[2025-11-25 18:59:51] 2025-11-25 23:59:19,283 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:59:51] 2025-11-25 23:59:19,302 | INFO     | cat /etc/os-release:
[2025-11-25 18:59:51] NAME="CentOS Linux"
[2025-11-25 18:59:51] VERSION="7 (Core)"
[2025-11-25 18:59:51] ID="centos"
[2025-11-25 18:59:51] ID_LIKE="rhel fedora"
[2025-11-25 18:59:51] VERSION_ID="7"
[2025-11-25 18:59:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:59:51] ANSI_COLOR="0;31"
[2025-11-25 18:59:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:59:51] HOME_URL="https://www.centos.org/"
[2025-11-25 18:59:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:59:51] 
[2025-11-25 18:59:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:59:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:59:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:59:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:59:51] 
[2025-11-25 18:59:51] 2025-11-25 23:59:19,303 | INFO     | ***************************************
[2025-11-25 18:59:51] 2025-11-25 23:59:19,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 18:59:51] 2025-11-25 23:59:19,905 | INFO     | sufficient remaining disk space (71683801088 B)
[2025-11-25 18:59:51] 2025-11-25 23:59:19,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:59:51] 2025-11-25 23:59:19,907 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:59:51] 2025-11-25 23:59:19,907 | INFO     | update_server=False
[2025-11-25 18:59:51] 2025-11-25 23:59:19,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:59:51] 2025-11-25 23:59:19,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:59:51] 2025-11-25 23:59:19,912 | INFO     | aborting loop
[2025-11-25 18:59:51] 2025-11-25 23:59:19,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:59:51] 2025-11-25 23:59:20,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:59:51] 2025-11-25 23:59:20,473 | INFO     | all payload control threads have been joined
[2025-11-25 18:59:51] 2025-11-25 23:59:20,757 | INFO     | all data control threads have been joined
[2025-11-25 18:59:51] 2025-11-25 23:59:20,915 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:20,917 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:20,979 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,054 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,120 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,479 | INFO     | [payload] control thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,512 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,537 | INFO     | all job control threads have been joined
[2025-11-25 18:59:51] 2025-11-25 23:59:21,733 | INFO     | [job] validate thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,762 | INFO     | [data] control thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,798 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:21,932 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:22,233 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:22,549 | INFO     | [job] control thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:22,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:59:51] 2025-11-25 23:59:23,583 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:24,434 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:59:51] 2025-11-25 23:59:42,778 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:59:51] 2025-11-25 23:59:44,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953828652864)>', '<ExcThread(monitor, started 139953111557888)>']
[2025-11-25 18:59:51] 2025-11-25 23:59:49,617 | INFO     | all workflow threads have been joined
[2025-11-25 18:59:51] 2025-11-25 23:59:49,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:59:51] 2025-11-25 23:59:49,618 | INFO     | traces error code: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:49,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:59:51] 2025-11-25 23:59:49,826 | INFO     | PID=3856268 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:59:51] 2025-11-25 23:59:49,826 | INFO     | .. there are 44 such processes running
[2025-11-25 18:59:51] 2025-11-25 23:59:49,827 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:59:51] 2025-11-25 23:59:49,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:59:51] 2025-11-25 23:59:49,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:59:51] 2025-11-25 23:59:49,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:59:51] 2025-11-25 23:59:49,827 | INFO     | [monitor] control thread has ended
[2025-11-25 18:59:51] 2025-11-25 23:59:50,144 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:59:51] 2025-11-25 23:59:50,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:59:51] 2025-11-25 23:59:50,183 [wrapper] pilotpid: 3856268
[2025-11-25 18:59:51] 2025-11-25 23:59:50,199 [wrapper] Pilot exit status: 0
[2025-11-25 18:59:51] 2025-11-25 23:59:50,290 [wrapper] pandaids: 6895372723
[2025-11-25 18:59:51] 2025-11-25 23:59:50,575 [wrapper] cleanup supervisor_pilot  694257 3856269
[2025-11-25 18:59:51] 2025-11-25 23:59:50,616 [wrapper] Test setup, not cleaning
[2025-11-25 18:59:51] 2025-11-25 23:59:50,644 [wrapper] apfmon messages muted
[2025-11-25 18:59:51] 2025-11-25 23:59:50,659 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:59:51] 2025-11-25 23:59:50,674 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:59:51]  *** Error codes and diagnostics ***
[2025-11-25 18:59:51]     "exeErrorCode": 0,
[2025-11-25 18:59:51]     "exeErrorDiag": "",
[2025-11-25 18:59:51]     "pilotErrorCode": 0,
[2025-11-25 18:59:51]     "pilotErrorDiag": "",
[2025-11-25 18:59:51]  *** Listing of results directory ***
[2025-11-25 18:59:51] total 1320340
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:10 pilot3.tar.gz
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:13 queuedata.json
[2025-11-25 18:59:51] -rwx------. 1 boincer umatlas     36292 Nov 23 17:14 runpilot2-wrapper.sh
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:59:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:30 run_atlas
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:30 job.xml
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas 408390964 Nov 24 17:30 EVNT.47483658._001196.pool.root.1
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:30 start_atlas.sh
[2025-11-25 18:59:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:30 shared
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 17:30 input.tar.gz
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:30 boinc_lockfile
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 17:30 pandaJob.out
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas        57 Nov 24 17:30 setup.sh.local
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas    991801 Nov 24 17:30 agis_schedconf.cvmfs.json
[2025-11-25 18:59:51] drwx------. 5 boincer umatlas      4096 Nov 24 17:31 pilot3
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas       533 Nov 25 18:45 boinc_task_state.xml
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas 911063451 Nov 25 18:58 HITS.47556149._001828.pool.root.1
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas      1070 Nov 25 18:58 memory_monitor_summary.json
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas      6656 Nov 25 18:58 init_data.xml
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas   2515497 Nov 25 18:59 log.47556149._001828.job.log.tgz.1
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas        95 Nov 25 18:59 pilot_heartbeat.json
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas      8634 Nov 25 18:59 heartbeat.json
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas       823 Nov 25 18:59 pilotlog.txt
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas        29 Nov 25 18:59 wrapper_checkpoint.txt
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:59 boinc_mmap_file
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas  11815255 Nov 25 18:59 log.47556149._001828.job.log.1
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas       353 Nov 25 18:59 output.list
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:59 runtime_log
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas  14346240 Nov 25 18:59 result.tar.gz
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 18:59 runtime_log.err
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas       661 Nov 25 18:59 HRvMDmxWXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdDLKDm5Q28pn.diag
[2025-11-25 18:59:51] -rw-r--r--. 1 boincer umatlas     21121 Nov 25 18:59 stderr.txt
[2025-11-25 18:59:51] HITS file was successfully produced:
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas 911063451 Nov 25 18:58 shared/HITS.pool.root.1
[2025-11-25 18:59:51]  *** Contents of shared directory: ***
[2025-11-25 18:59:51] total 1303144
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas 408390964 Nov 24 17:30 ATLAS.root_0
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:30 start_atlas.sh
[2025-11-25 18:59:51] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 17:30 input.tar.gz
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas 911063451 Nov 25 18:58 HITS.pool.root.1
[2025-11-25 18:59:51] -rw-------. 1 boincer umatlas  14346240 Nov 25 18:59 result.tar.gz
19:00:13 (3850983): run_atlas exited; CPU time 307911.635777
19:00:13 (3850983): called boinc_finish(0)

</stderr_txt>
]]>

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