Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:22 (23240): wrapper (7.7.26015): starting
14:46:22 (23240): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:46:22] Arguments: --nthreads 8
[2025-11-24 14:46:22] Threads: 8
[2025-11-24 14:46:22] Checking for CVMFS
[2025-11-24 14:46:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:46:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:46:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:46:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:46:23] 2.11.2.0 2873 57957 85876 153257 1 82 15755968 20275201 1 130560 0 14467730 99.829 3465620 30782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 14:46:23] CVMFS is ok
[2025-11-24 14:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:46:23] Further information can be found at the LHC@home message board.
[2025-11-24 14:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:46:23] Checking for apptainer binary...
[2025-11-24 14:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:46:23] Running /usr/bin/apptainer --version
[2025-11-24 14:46:23] apptainer version 1.3.2-1.el7
[2025-11-24 14:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:46:24] c-115-13.aglt2.org
[2025-11-24 14:46:24] apptainer works
[2025-11-24 14:46:24] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:46:24] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:46:24] Starting ATLAS job with PandaID=6895355724
[2025-11-24 14:46:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:53:53]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:53:53] 2025-11-25 06:53:04,827 | INFO     | time since job start (39983s) is within the limit (172800.0s)
[2025-11-25 01:53:53] 2025-11-25 06:53:05,861 | INFO     | monitor loop #2946: job 0:6895355724 is in state 'finished'
[2025-11-25 01:53:53] 2025-11-25 06:53:05,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:53:53] 2025-11-25 06:53:06,834 | INFO     | time since job start (39985s) is within the limit (172800.0s)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,680 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 01:53:53] 2025-11-25 06:53:07,684 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-25 01:53:53] 2025-11-25 06:53:07,685 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895355724/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,686 | INFO     | extracted standard info from prmon json
[2025-11-25 01:53:53] 2025-11-25 06:53:07,686 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:53:53] 2025-11-25 06:53:07,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:53:53] 2025-11-25 06:53:07,696 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:53:53] 2025-11-25 06:53:07,697 | INFO     | sum of square deviations: 87136689183.246
[2025-11-25 01:53:53] 2025-11-25 06:53:07,705 | INFO     | sum of deviations: 687082783602.576
[2025-11-25 01:53:53] 2025-11-25 06:53:07,705 | INFO     | mean x: 1764033580.6381679
[2025-11-25 01:53:53] 2025-11-25 06:53:07,705 | INFO     | mean y: 3106051.512977099
[2025-11-25 01:53:53] 2025-11-25 06:53:07,705 | INFO     | intersect: -13906500961.491749
[2025-11-25 01:53:53] 2025-11-25 06:53:07,706 | INFO     | chi2: 5.789697653264508
[2025-11-25 01:53:53] 2025-11-25 06:53:07,707 | INFO     | sum of square deviations: 85156509773.69365
[2025-11-25 01:53:53] 2025-11-25 06:53:07,715 | INFO     | sum of deviations: 917087648987.8774
[2025-11-25 01:53:53] 2025-11-25 06:53:07,715 | INFO     | mean x: 1764033428.143077
[2025-11-25 01:53:53] 2025-11-25 06:53:07,715 | INFO     | mean y: 3123758.8507692306
[2025-11-25 01:53:53] 2025-11-25 06:53:07,715 | INFO     | intersect: -18994522735.246372
[2025-11-25 01:53:53] 2025-11-25 06:53:07,716 | INFO     | chi2: 2.737297228326256
[2025-11-25 01:53:53] 2025-11-25 06:53:07,716 | INFO     | current chi2=2.737297228326256 (change=52.72124051619799 %)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,717 | INFO     | sum of square deviations: 83206563489.11015
[2025-11-25 01:53:53] 2025-11-25 06:53:07,724 | INFO     | sum of deviations: 957183227259.5424
[2025-11-25 01:53:53] 2025-11-25 06:53:07,725 | INFO     | mean x: 1764033275.648062
[2025-11-25 01:53:53] 2025-11-25 06:53:07,725 | INFO     | mean y: 3126879.434108527
[2025-11-25 01:53:53] 2025-11-25 06:53:07,725 | INFO     | intersect: -20289780229.979446
[2025-11-25 01:53:53] 2025-11-25 06:53:07,725 | INFO     | chi2: 2.4784688134270794
[2025-11-25 01:53:53] 2025-11-25 06:53:07,726 | INFO     | current chi2=2.4784688134270794 (change=9.455619660910536 %)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,726 | INFO     | right removable region: 644
[2025-11-25 01:53:53] 2025-11-25 06:53:07,726 | INFO     | sum of square deviations: 85156254793.6936
[2025-11-25 01:53:53] 2025-11-25 06:53:07,734 | INFO     | sum of deviations: 491856643543.873
[2025-11-25 01:53:53] 2025-11-25 06:53:07,734 | INFO     | mean x: 1764033733.143077
[2025-11-25 01:53:53] 2025-11-25 06:53:07,735 | INFO     | mean y: 3121054.8938461537
[2025-11-25 01:53:53] 2025-11-25 06:53:07,735 | INFO     | intersect: -10185815896.172928
[2025-11-25 01:53:53] 2025-11-25 06:53:07,735 | INFO     | chi2: 3.444250199754763
[2025-11-25 01:53:53] 2025-11-25 06:53:07,735 | INFO     | current chi2=3.444250199754763 (change=40.51070701744277 %)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,736 | INFO     | sum of square deviations: 83206132585.69588
[2025-11-25 01:53:53] 2025-11-25 06:53:07,744 | INFO     | sum of deviations: 458102455332.2219
[2025-11-25 01:53:53] 2025-11-25 06:53:07,744 | INFO     | mean x: 1764033885.6449614
[2025-11-25 01:53:53] 2025-11-25 06:53:07,744 | INFO     | mean y: 3123692.4682170544
[2025-11-25 01:53:53] 2025-11-25 06:53:07,745 | INFO     | intersect: -9709000031.956877
[2025-11-25 01:53:53] 2025-11-25 06:53:07,745 | INFO     | chi2: 3.420693246903663
[2025-11-25 01:53:53] 2025-11-25 06:53:07,745 | INFO     | current chi2=3.420693246903663 (change=0.6839501048088108 %)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,746 | INFO     | left removable region: 20
[2025-11-25 01:53:53] 2025-11-25 06:53:07,746 | INFO     | sum of square deviations: 75340939405.29318
[2025-11-25 01:53:53] 2025-11-25 06:53:07,754 | INFO     | sum of deviations: 684390371556.9811
[2025-11-25 01:53:53] 2025-11-25 06:53:07,754 | INFO     | mean x: 1764033855.1586537
[2025-11-25 01:53:53] 2025-11-25 06:53:07,754 | INFO     | mean y: 3148304.262820513
[2025-11-25 01:53:53] 2025-11-25 06:53:07,754 | INFO     | intersect: -16021177846.975811
[2025-11-25 01:53:53] 2025-11-25 06:53:07,755 | INFO     | chi2: 0.0749918700286435
[2025-11-25 01:53:53] 2025-11-25 06:53:07,755 | INFO     | current memory leak: 9.08 B/s (using 624 data points, chi2=0.07)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,755 | INFO     | could have reported an average CPU frequency of 2380 MHz (25 samples)
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | ..............................
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . Timing measurements:
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . get job = 0 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . initial setup = 2 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . payload setup = 8 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . stage-in = 0 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . payload execution = 39943 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . stage-out = 3 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | . log creation = 0 s
[2025-11-25 01:53:53] 2025-11-25 06:53:07,756 | INFO     | ..............................
[2025-11-25 01:53:53] 2025-11-25 06:53:08,036 | INFO     | 
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | job summary report
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | --------------------------------------------------
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | PanDA job id: 6895355724
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | task id: 47556149
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | errors: (none)
[2025-11-25 01:53:53] 2025-11-25 06:53:08,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:53:53] 2025-11-25 06:53:08,038 | INFO     | pilot state: finished 
[2025-11-25 01:53:53] 2025-11-25 06:53:08,038 | INFO     | transexitcode: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:08,038 | INFO     | exeerrorcode: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:08,038 | INFO     | exeerrordiag: 
[2025-11-25 01:53:53] 2025-11-25 06:53:08,038 | INFO     | exitcode: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | exitmsg: OK
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | cpuconsumptiontime: 310765 s
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | nevents: 1000
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | neventsw: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | pid: 1030
[2025-11-25 01:53:53] 2025-11-25 06:53:08,039 | INFO     | pgrp: 1030
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | corecount: 8
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | event service: False
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | sizes: {0: 2284258, 1: 2284258, 6: 2284548, 11: 2284576, 39955: 2328082, 39956: 2328081, 39960: 2337259, 39961: 2337315, 39969: 2337625}
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | --------------------------------------------------
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | 
[2025-11-25 01:53:53] 2025-11-25 06:53:08,040 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 01:53:53] 2025-11-25 06:53:08,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:53:53] 2025-11-25 06:53:08,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:53:53] 2025-11-25 06:53:08,071 | INFO     | job 6895355724 has completed (purged errors)
[2025-11-25 01:53:53] 2025-11-25 06:53:08,071 | INFO     | overall cleanup function is called
[2025-11-25 01:53:53] 2025-11-25 06:53:09,085 | INFO     | --- collectZombieJob: --- 10, [1030]
[2025-11-25 01:53:53] 2025-11-25 06:53:09,086 | INFO     | zombie collector waiting for pid 1030
[2025-11-25 01:53:53] 2025-11-25 06:53:09,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:53:53] 2025-11-25 06:53:09,086 | INFO     | collected zombie processes
[2025-11-25 01:53:53] 2025-11-25 06:53:09,086 | INFO     | will attempt to kill all subprocesses of pid=1030
[2025-11-25 01:53:53] 2025-11-25 06:53:09,171 | INFO     | process IDs to be killed: [1030] (in reverse order)
[2025-11-25 01:53:53] 2025-11-25 06:53:09,230 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:53:53] 2025-11-25 06:53:09,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:53:53] 2025-11-25 06:53:09,234 | INFO     | did not find any defunct processes belonging to 1030
[2025-11-25 01:53:53] 2025-11-25 06:53:09,237 | INFO     | did not find any defunct processes belonging to 1030
[2025-11-25 01:53:53] 2025-11-25 06:53:09,240 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:53:53] 2025-11-25 06:53:09,240 | INFO     | ready for new job
[2025-11-25 01:53:53] 2025-11-25 06:53:09,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:53:53] 2025-11-25 06:53:09,244 | INFO     | ***************************************
[2025-11-25 01:53:53] 2025-11-25 06:53:09,244 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:53:53] 2025-11-25 06:53:09,244 | INFO     | ***************************************
[2025-11-25 01:53:53] 2025-11-25 06:53:09,244 | INFO     | 
[2025-11-25 01:53:53] 2025-11-25 06:53:09,245 | INFO     | architecture information:
[2025-11-25 01:53:53] 2025-11-25 06:53:09,245 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:53:53] 2025-11-25 06:53:09,264 | INFO     | cat /etc/os-release:
[2025-11-25 01:53:53] NAME="CentOS Linux"
[2025-11-25 01:53:53] VERSION="7 (Core)"
[2025-11-25 01:53:53] ID="centos"
[2025-11-25 01:53:53] ID_LIKE="rhel fedora"
[2025-11-25 01:53:53] VERSION_ID="7"
[2025-11-25 01:53:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:53:53] ANSI_COLOR="0;31"
[2025-11-25 01:53:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:53:53] HOME_URL="https://www.centos.org/"
[2025-11-25 01:53:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:53:53] 
[2025-11-25 01:53:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:53:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:53:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:53:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:53:53] 
[2025-11-25 01:53:53] 2025-11-25 06:53:09,264 | INFO     | ***************************************
[2025-11-25 01:53:53] 2025-11-25 06:53:09,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 01:53:53] 2025-11-25 06:53:09,788 | INFO     | sufficient remaining disk space (17461936128 B)
[2025-11-25 01:53:53] 2025-11-25 06:53:09,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:53:53] 2025-11-25 06:53:09,788 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:53:53] 2025-11-25 06:53:09,789 | INFO     | update_server=False
[2025-11-25 01:53:53] 2025-11-25 06:53:09,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:53:53] 2025-11-25 06:53:09,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:53:53] 2025-11-25 06:53:09,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:53:53] 2025-11-25 06:53:09,790 | INFO     | aborting loop
[2025-11-25 01:53:53] 2025-11-25 06:53:09,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:53:53] 2025-11-25 06:53:09,992 | INFO     | all job control threads have been joined
[2025-11-25 01:53:53] 2025-11-25 06:53:10,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:53:53] 2025-11-25 06:53:10,078 | INFO     | all data control threads have been joined
[2025-11-25 01:53:53] 2025-11-25 06:53:10,701 | INFO     | all payload control threads have been joined
[2025-11-25 01:53:53] 2025-11-25 06:53:10,794 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:10,797 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:10,798 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:10,998 | INFO     | [job] control thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,084 | INFO     | [data] control thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,440 | INFO     | [job] validate thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,454 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,555 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,706 | INFO     | [payload] control thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,795 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,818 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:11,925 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:12,056 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:12,073 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:14,026 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:53:53] 2025-11-25 06:53:40,040 | INFO     | PID=26935 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:53:53] 2025-11-25 06:53:40,040 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:53:53] 2025-11-25 06:53:40,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:53:53] 2025-11-25 06:53:40,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:53:53] 2025-11-25 06:53:47,473 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:53:53] 2025-11-25 06:53:48,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658918098752)>', '<ExcThread(monitor, started 139658470074112)>']
[2025-11-25 01:53:53] 2025-11-25 06:53:49,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:53:53] 2025-11-25 06:53:49,087 | INFO     | [monitor] control thread has ended
[2025-11-25 01:53:53] 2025-11-25 06:53:53,566 | INFO     | all workflow threads have been joined
[2025-11-25 01:53:53] 2025-11-25 06:53:53,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:53:53] 2025-11-25 06:53:53,567 | INFO     | traces error code: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:53,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:53:53] 2025-11-25 06:53:53,671 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:53:53] 2025-11-25 06:53:53,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:53:53] 2025-11-25 06:53:53,681 [wrapper] pilotpid: 26935
[2025-11-25 01:53:53] 2025-11-25 06:53:53,686 [wrapper] Pilot exit status: 0
[2025-11-25 01:53:53] 2025-11-25 06:53:53,702 [wrapper] pandaids: 6895355724
[2025-11-25 01:53:53] 2025-11-25 06:53:53,750 [wrapper] cleanup supervisor_pilot 21993 26936
[2025-11-25 01:53:53] 2025-11-25 06:53:53,754 [wrapper] Test setup, not cleaning
[2025-11-25 01:53:53] 2025-11-25 06:53:53,759 [wrapper] apfmon messages muted
[2025-11-25 01:53:53] 2025-11-25 06:53:53,763 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:53:53] 2025-11-25 06:53:53,768 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:53:53]  *** Error codes and diagnostics ***
[2025-11-25 01:53:53]     "exeErrorCode": 0,
[2025-11-25 01:53:53]     "exeErrorDiag": "",
[2025-11-25 01:53:53]     "pilotErrorCode": 0,
[2025-11-25 01:53:53]     "pilotErrorDiag": "",
[2025-11-25 01:53:53]  *** Listing of results directory ***
[2025-11-25 01:53:53] total 1318600
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 03:40 queuedata.json
[2025-11-25 01:53:53] -rwx------ 1 boincer umatlas     36292 Nov 23 03:43 runpilot2-wrapper.sh
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas       100 Nov 24 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:53:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 14:46 run_atlas
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas       105 Nov 24 14:46 job.xml
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas 412955213 Nov 24 14:46 EVNT.47483658._001149.pool.root.1
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:46 start_atlas.sh
[2025-11-25 01:53:53] drwxrwx--x 2 boincer umatlas      4096 Nov 24 14:46 shared
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 14:46 input.tar.gz
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas         0 Nov 24 14:46 boinc_lockfile
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 14:46 pandaJob.out
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas        57 Nov 24 14:46 setup.sh.local
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas    991801 Nov 24 14:46 agis_schedconf.cvmfs.json
[2025-11-25 01:53:53] drwx------ 5 boincer umatlas      4096 Nov 24 14:46 pilot3
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas       533 Nov 25 01:43 boinc_task_state.xml
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 01:49 init_data.xml
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas 918534115 Nov 25 01:52 HITS.47556149._001352.pool.root.1
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas      1061 Nov 25 01:52 memory_monitor_summary.json
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas        95 Nov 25 01:52 pilot_heartbeat.json
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas   1516227 Nov 25 01:52 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas   1909594 Nov 25 01:52 log.47556149._001352.job.log.tgz.1
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas      8659 Nov 25 01:53 heartbeat.json
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 01:53 boinc_mmap_file
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas        29 Nov 25 01:53 wrapper_checkpoint.txt
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas      4746 Nov 25 01:53 pilotlog.txt
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas   5505266 Nov 25 01:53 log.47556149._001352.job.log.1
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas       353 Nov 25 01:53 output.list
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas       620 Nov 25 01:53 runtime_log
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas   7434240 Nov 25 01:53 result.tar.gz
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas       668 Nov 25 01:53 YWiMDmYsKh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnkKKDmpX4Uqm.diag
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 01:53 runtime_log.err
[2025-11-25 01:53:53] -rw-r--r-- 1 boincer umatlas     21310 Nov 25 01:53 stderr.txt
[2025-11-25 01:53:53] HITS file was successfully produced:
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas 918534115 Nov 25 01:52 shared/HITS.pool.root.1
[2025-11-25 01:53:53]  *** Contents of shared directory: ***
[2025-11-25 01:53:53] total 1308152
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas 412955213 Nov 24 14:46 ATLAS.root_0
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:46 start_atlas.sh
[2025-11-25 01:53:53] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 14:46 input.tar.gz
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas 918534115 Nov 25 01:52 HITS.pool.root.1
[2025-11-25 01:53:53] -rw------- 1 boincer umatlas   7434240 Nov 25 01:53 result.tar.gz
01:53:55 (23240): run_atlas exited; CPU time 308867.424414
01:53:55 (23240): called boinc_finish(0)

</stderr_txt>
]]>

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