Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:10:59 (1313207): wrapper (7.7.26015): starting
12:10:59 (1313207): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 12:10:59] Arguments: --nthreads 12
[2025-11-24 12:10:59] Threads: 12
[2025-11-24 12:10:59] Checking for CVMFS
[2025-11-24 12:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:10:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:10:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:11:00] 2.11.5.0 2718463 25674 208760 153257 1 711 25480531 45568000 21743 130560 0 167784319 99.788 114267429 20071 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 12:11:00] CVMFS is ok
[2025-11-24 12:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:11:00] Further information can be found at the LHC@home message board.
[2025-11-24 12:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:11:00] Checking for apptainer binary...
[2025-11-24 12:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:11:00] Running /usr/bin/apptainer --version
[2025-11-24 12:11:00] apptainer version 1.4.1-1.el9
[2025-11-24 12:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:11:01] wns0043.triumf.lcg
[2025-11-24 12:11:01] apptainer works
[2025-11-24 12:11:01] Set ATHENA_PROC_NUMBER=12
[2025-11-24 12:11:01] Set ATHENA_CORE_NUMBER=12
[2025-11-24 12:11:01] Starting ATLAS job with PandaID=6895475280
[2025-11-24 12:11:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:20:56]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | WARNING  | wrong length of table data, x=[1764015219.0, 1764015280.0, 1764015341.0, 1764015402.0, 1764015463.0], y=[1206.0, 826529.0, 461042.0, 614182.0, 254360.0] (must be s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . Timing measurements:
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . get job = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . initial setup = 4 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload setup = 27 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-in = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload execution = 273 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-out = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . log creation = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895475280/pilotlog.txt
[2025-11-24 12:20:56] 2025-11-24 20:20:14,760 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 12:20:56] - Log from pilotlog.txt -
[2025-11-24 12:20:56] 2025-11-24 20:20:14,700 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895475280/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,700 | INFO     | extracted standard info from prmon json
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | WARNING  | wrong length of table data, x=[1764015219.0, 1764015280.0, 1764015341.0, 1764015402.0, 1764015463.0], y=[1206.0, 826529.0, 461042.0, 614182.0, 254360.0] (must be s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . Timing measurements:
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . get job = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . initial setup = 4 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload setup = 27 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-in = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload execution = 273 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-out = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . log creation = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895475280/pilotlog.txt
[2025-11-24 12:20:56] 2025-11-24 20:20:14,761 | WARNING  | 
[2025-11-24 12:20:56] [begin log extracts]
[2025-11-24 12:20:56] - Log from pilotlog.txt -
[2025-11-24 12:20:56] 2025-11-24 20:20:14,700 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895475280/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,700 | INFO     | extracted standard info from prmon json
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 12:20:56] 2025-11-24 20:20:14,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | WARNING  | wrong length of table data, x=[1764015219.0, 1764015280.0, 1764015341.0, 1764015402.0, 1764015463.0], y=[1206.0, 826529.0, 461042.0, 614182.0, 254360.0] (must be s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,702 | INFO     | could have reported an average CPU frequency of 1379 MHz (4 samples)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . Timing measurements:
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . get job = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . initial setup = 4 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload setup = 27 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-in = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . payload execution = 273 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . stage-out = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | . log creation = 0 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,703 | INFO     | ..............................
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 12:20:56] 2025-11-24 20:20:14,704 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895475280/pilotlog.txt
[2025-11-24 12:20:56] [end log extracts]
[2025-11-24 12:20:56] 2025-11-24 20:20:14,761 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 12:20:56] 2025-11-24 20:20:14,762 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | 
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | job summary report
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | --------------------------------------------------
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | PanDA job id: 6895475280
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | task id: 47556149
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 12:17:40,680 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 12:20:56] 2025-11-24 20:20:14,927 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | pilot state: failed 
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | transexitcode: 65
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | exeerrorcode: 65
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | exitcode: 65
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | cpuconsumptiontime: 78 s
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | nevents: 0
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | neventsw: 0
[2025-11-24 12:20:56] 2025-11-24 20:20:14,928 | INFO     | pid: 1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:14,930 | INFO     | pgrp: 1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:14,930 | INFO     | corecount: 12
[2025-11-24 12:20:56] 2025-11-24 20:20:14,930 | INFO     | event service: False
[2025-11-24 12:20:56] 2025-11-24 20:20:14,930 | INFO     | sizes: {0: 2283482, 1: 2284164, 2: 2284363, 13: 2284363, 25: 2284419, 29: 2284709, 35: 2284865, 304: 2310438, 306: 2314784, 449: 2314922}
[2025-11-24 12:20:56] 2025-11-24 20:20:14,931 | INFO     | --------------------------------------------------
[2025-11-24 12:20:56] 2025-11-24 20:20:14,931 | INFO     | 
[2025-11-24 12:20:56] 2025-11-24 20:20:14,931 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 12:20:56] 2025-11-24 20:20:15,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:20:56] 2025-11-24 20:20:15,164 | INFO     | job 6895475280 has completed (purged errors)
[2025-11-24 12:20:56] 2025-11-24 20:20:15,165 | INFO     | overall cleanup function is called
[2025-11-24 12:20:56] 2025-11-24 20:20:16,192 | INFO     | --- collectZombieJob: --- 10, [1323789]
[2025-11-24 12:20:56] 2025-11-24 20:20:16,192 | INFO     | zombie collector waiting for pid 1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:16,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:20:56] 2025-11-24 20:20:16,192 | INFO     | collected zombie processes
[2025-11-24 12:20:56] 2025-11-24 20:20:16,192 | INFO     | will attempt to kill all subprocesses of pid=1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:17,493 | INFO     | process IDs to be killed: [1323789] (in reverse order)
[2025-11-24 12:20:56] 2025-11-24 20:20:17,630 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:20:56] 2025-11-24 20:20:17,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:20:56] 2025-11-24 20:20:17,652 | INFO     | did not find any defunct processes belonging to 1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:17,668 | INFO     | did not find any defunct processes belonging to 1323789
[2025-11-24 12:20:56] 2025-11-24 20:20:17,669 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:20:56] 2025-11-24 20:20:17,669 | INFO     | ready for new job
[2025-11-24 12:20:56] 2025-11-24 20:20:17,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:20:56] 2025-11-24 20:20:17,671 | INFO     | ***************************************
[2025-11-24 12:20:56] 2025-11-24 20:20:17,671 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:20:56] 2025-11-24 20:20:17,671 | INFO     | ***************************************
[2025-11-24 12:20:56] 2025-11-24 20:20:17,671 | INFO     | 
[2025-11-24 12:20:56] 2025-11-24 20:20:17,674 | INFO     | architecture information:
[2025-11-24 12:20:56] 2025-11-24 20:20:17,675 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:20:56] 2025-11-24 20:20:17,704 | INFO     | cat /etc/os-release:
[2025-11-24 12:20:56] NAME="CentOS Linux"
[2025-11-24 12:20:56] VERSION="7 (Core)"
[2025-11-24 12:20:56] ID="centos"
[2025-11-24 12:20:56] ID_LIKE="rhel fedora"
[2025-11-24 12:20:56] VERSION_ID="7"
[2025-11-24 12:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:20:56] ANSI_COLOR="0;31"
[2025-11-24 12:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:20:56] HOME_URL="https://www.centos.org/"
[2025-11-24 12:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:20:56] 
[2025-11-24 12:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:20:56] 
[2025-11-24 12:20:56] 2025-11-24 20:20:17,705 | INFO     | ***************************************
[2025-11-24 12:20:56] 2025-11-24 20:20:18,208 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 12:20:56] 2025-11-24 20:20:18,269 | INFO     | sufficient remaining disk space (1625023315968 B)
[2025-11-24 12:20:56] 2025-11-24 20:20:18,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:20:56] 2025-11-24 20:20:18,270 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:20:56] 2025-11-24 20:20:18,270 | INFO     | update_server=False
[2025-11-24 12:20:56] 2025-11-24 20:20:18,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:20:56] 2025-11-24 20:20:18,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:20:56] 2025-11-24 20:20:18,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:20:56] 2025-11-24 20:20:18,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:20:56] 2025-11-24 20:20:18,283 | INFO     | aborting loop
[2025-11-24 12:20:56] 2025-11-24 20:20:18,827 | INFO     | all data control threads have been joined
[2025-11-24 12:20:56] 2025-11-24 20:20:19,057 | INFO     | all job control threads have been joined
[2025-11-24 12:20:56] 2025-11-24 20:20:19,110 | INFO     | all payload control threads have been joined
[2025-11-24 12:20:56] 2025-11-24 20:20:19,281 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,289 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,405 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,507 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,679 | INFO     | [job] validate thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,833 | INFO     | [data] control thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:19,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:20:56] 2025-11-24 20:20:19,947 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,063 | INFO     | [job] control thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,116 | INFO     | [payload] control thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,278 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,286 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,301 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,382 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:20,948 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:22,284 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:20:56] 2025-11-24 20:20:48,078 | INFO     | PID=1316983 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 12:20:56] 2025-11-24 20:20:48,078 | INFO     | .. there are 28 such processes running
[2025-11-24 12:20:56] 2025-11-24 20:20:48,078 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:20:56] 2025-11-24 20:20:48,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:20:56] 2025-11-24 20:20:48,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:20:56] 2025-11-24 20:20:48,272 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:20:56] 2025-11-24 20:20:50,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574960711488)>', '<ExcThread(monitor, started 140574136985344)>']
[2025-11-24 12:20:56] 2025-11-24 20:20:50,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:20:56] 2025-11-24 20:20:50,090 | INFO     | [monitor] control thread has ended
[2025-11-24 12:20:56] 2025-11-24 20:20:55,092 | INFO     | all workflow threads have been joined
[2025-11-24 12:20:56] 2025-11-24 20:20:55,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:20:56] 2025-11-24 20:20:55,093 | INFO     | traces error code: 0
[2025-11-24 12:20:56] 2025-11-24 20:20:55,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:20:56] 2025-11-24 20:20:55,729 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:20:56] 2025-11-24 20:20:55,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:20:56] 2025-11-24 20:20:55,738 [wrapper] pilotpid: 1316983
[2025-11-24 12:20:56] 2025-11-24 20:20:55,742 [wrapper] Pilot exit status: 0
[2025-11-24 12:20:56] 2025-11-24 20:20:55,977 [wrapper] pandaids: 6895475280
[2025-11-24 12:20:56] 2025-11-24 20:20:56,080 [wrapper] cleanup supervisor_pilot 1316989 1316984
[2025-11-24 12:20:56] 2025-11-24 20:20:56,085 [wrapper] Test setup, not cleaning
[2025-11-24 12:20:56] 2025-11-24 20:20:56,089 [wrapper] apfmon messages muted
[2025-11-24 12:20:56] 2025-11-24 20:20:56,093 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:20:56] 2025-11-24 20:20:56,097 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:20:56]  *** Error codes and diagnostics ***
[2025-11-24 12:20:56]     "exeErrorCode": 65,
[2025-11-24 12:20:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 12:20:56]     "pilotErrorCode": 1305,
[2025-11-24 12:20:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 12:20:56]  *** Listing of results directory ***
[2025-11-24 12:20:56] total 405700
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc    576529 Nov 24 00:46 pilot3.tar.gz
[2025-11-24 12:20:56] -rwx------. 1 boinc boinc     36292 Nov 24 00:58 runpilot2-wrapper.sh
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc      5112 Nov 24 00:58 queuedata.json
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc       100 Nov 24 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:20:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 12:10 run_atlas
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc       105 Nov 24 12:10 job.xml
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc      6595 Nov 24 12:10 init_data.xml
[2025-11-24 12:20:56] -rw-r--r--. 2 boinc boinc 411156557 Nov 24 12:10 EVNT.47483658._001285.pool.root.1
[2025-11-24 12:20:56] -rw-r--r--. 2 boinc boinc     15847 Nov 24 12:10 start_atlas.sh
[2025-11-24 12:20:56] drwxrwx--x. 2 boinc boinc      4096 Nov 24 12:10 shared
[2025-11-24 12:20:56] -rw-r--r--. 2 boinc boinc    590104 Nov 24 12:10 input.tar.gz
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc         0 Nov 24 12:10 boinc_lockfile
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc      2786 Nov 24 12:11 pandaJob.out
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc    991801 Nov 24 12:11 agis_schedconf.cvmfs.json
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc   1516227 Nov 24 12:11 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:20:56] drwx------. 5 boinc boinc      4096 Nov 24 12:11 pilot3
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc       525 Nov 24 12:17 boinc_task_state.xml
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc      1009 Nov 24 12:17 memory_monitor_summary.json
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc     51600 Nov 24 12:17 log.47556149._002719.job.log.tgz.1
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc        95 Nov 24 12:19 pilot_heartbeat.json
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc     10341 Nov 24 12:20 heartbeat.json
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc        23 Nov 24 12:20 wrapper_checkpoint.txt
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc      8192 Nov 24 12:20 boinc_mmap_file
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc      4823 Nov 24 12:20 pilotlog.txt
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc    127625 Nov 24 12:20 log.47556149._002719.job.log.1
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc       186 Nov 24 12:20 output.list
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc       620 Nov 24 12:20 runtime_log
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc    204800 Nov 24 12:20 result.tar.gz
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc      8636 Nov 24 12:20 runtime_log.err
[2025-11-24 12:20:56] -rw-------. 1 boinc boinc       646 Nov 24 12:20 g57MDmBahh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5YLKDmzZ4SEn.diag
[2025-11-24 12:20:56] -rw-r--r--. 1 boinc boinc     22674 Nov 24 12:20 stderr.txt
[2025-11-24 12:20:57] No HITS result produced
[2025-11-24 12:20:57]  *** Contents of shared directory: ***
[2025-11-24 12:20:57] total 402324
[2025-11-24 12:20:57] -rw-r--r--. 2 boinc boinc 411156557 Nov 24 12:10 ATLAS.root_0
[2025-11-24 12:20:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 12:10 start_atlas.sh
[2025-11-24 12:20:57] -rw-r--r--. 2 boinc boinc    590104 Nov 24 12:10 input.tar.gz
[2025-11-24 12:20:57] -rw-------. 1 boinc boinc    204800 Nov 24 12:20 result.tar.gz
12:20:58 (1313207): run_atlas exited; CPU time 85.256174
12:20:58 (1313207): called boinc_finish(0)

</stderr_txt>
]]>

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