Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:19 (15685): wrapper (7.7.26015): starting
00:41:19 (15685): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:41:19] Arguments: --nthreads 8
[2025-11-27 00:41:19] Threads: 8
[2025-11-27 00:41:19] Checking for CVMFS
[2025-11-27 00:41:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:41:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:41:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:41:21] 2.11.2.0 20802 86211 130036 153340 2 85 22972002 25165825 1337 130560 15 26721818 99.852 18454647 1771 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 00:41:21] CVMFS is ok
[2025-11-27 00:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:41:21] Checking for apptainer binary...
[2025-11-27 00:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:41:21] Running /usr/bin/apptainer --version
[2025-11-27 00:41:21] apptainer version 1.3.2-1.el7
[2025-11-27 00:41:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:41:31] cg-vwn369.simple-grid.lan
[2025-11-27 00:41:31] apptainer works
[2025-11-27 00:41:31] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:41:31] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:41:31] Starting ATLAS job with PandaID=6895372780
[2025-11-27 00:41:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:50:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:50:01] 2025-11-27 22:48:56,419 | INFO     | monitor loop #5578: job 0:6895372780 is in state 'finished'
[2025-11-27 23:50:01] 2025-11-27 22:48:56,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:50:01] 2025-11-27 22:48:56,455 | INFO     | time since job start (83009s) is within the limit (172800.0s)
[2025-11-27 23:50:01] 2025-11-27 22:48:58,462 | INFO     | time since job start (83011s) is within the limit (172800.0s)
[2025-11-27 23:50:01] 2025-11-27 22:48:58,925 | INFO     | monitor loop #5579: job 0:6895372780 is in state 'finished'
[2025-11-27 23:50:01] 2025-11-27 22:48:58,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:50:01] 2025-11-27 22:49:00,469 | INFO     | time since job start (83013s) is within the limit (172800.0s)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,228 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:50:01] 2025-11-27 22:49:01,230 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:50:01] 2025-11-27 22:49:01,233 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6895372780/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,233 | INFO     | extracted standard info from prmon json
[2025-11-27 23:50:01] 2025-11-27 22:49:01,234 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:50:01] 2025-11-27 22:49:01,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:50:01] 2025-11-27 22:49:01,269 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:50:01] 2025-11-27 22:49:01,271 | INFO     | sum of square deviations: 766316847863.2124
[2025-11-27 23:50:01] 2025-11-27 22:49:01,333 | INFO     | sum of deviations: 3046291752847.493
[2025-11-27 23:50:01] 2025-11-27 22:49:01,333 | INFO     | mean x: 1764242399.5806212
[2025-11-27 23:50:01] 2025-11-27 22:49:01,333 | INFO     | mean y: 2858777.293639053
[2025-11-27 23:50:01] 2025-11-27 22:49:01,333 | INFO     | intersect: -7010424418.622273
[2025-11-27 23:50:01] 2025-11-27 22:49:01,335 | INFO     | chi2: 15.364917455688975
[2025-11-27 23:50:01] 2025-11-27 22:49:01,337 | INFO     | sum of square deviations: 757846660222.3522
[2025-11-27 23:50:01] 2025-11-27 22:49:01,387 | INFO     | sum of deviations: 3499158077988.1304
[2025-11-27 23:50:01] 2025-11-27 22:49:01,388 | INFO     | mean x: 1764242247.0846326
[2025-11-27 23:50:01] 2025-11-27 22:49:01,388 | INFO     | mean y: 2866930.0601336304
[2025-11-27 23:50:01] 2025-11-27 22:49:01,388 | INFO     | intersect: -8143058669.985209
[2025-11-27 23:50:01] 2025-11-27 22:49:01,390 | INFO     | chi2: 12.171758121334825
[2025-11-27 23:50:01] 2025-11-27 22:49:01,390 | INFO     | current chi2=12.171758121334825 (change=20.78214441153316 %)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,390 | INFO     | right removable region: 1346
[2025-11-27 23:50:01] 2025-11-27 22:49:01,392 | INFO     | sum of square deviations: 757845769012.3519
[2025-11-27 23:50:01] 2025-11-27 22:49:01,449 | INFO     | sum of deviations: 2493233288986.122
[2025-11-27 23:50:01] 2025-11-27 22:49:01,449 | INFO     | mean x: 1764242552.0846326
[2025-11-27 23:50:01] 2025-11-27 22:49:01,449 | INFO     | mean y: 2868732.6919079437
[2025-11-27 23:50:01] 2025-11-27 22:49:01,450 | INFO     | intersect: -5801304676.411793
[2025-11-27 23:50:01] 2025-11-27 22:49:01,451 | INFO     | chi2: 10.97186401832341
[2025-11-27 23:50:01] 2025-11-27 22:49:01,451 | INFO     | current chi2=10.97186401832341 (change=28.59145485183849 %)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,453 | INFO     | sum of square deviations: 749437342498.9464
[2025-11-27 23:50:01] 2025-11-27 22:49:01,469 | INFO     | monitor loop #5580: job 0:6895372780 is in state 'finished'
[2025-11-27 23:50:01] 2025-11-27 22:49:01,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,511 | INFO     | sum of deviations: 2085090948400.3198
[2025-11-27 23:50:01] 2025-11-27 22:49:01,511 | INFO     | mean x: 1764242704.5886736
[2025-11-27 23:50:01] 2025-11-27 22:49:01,512 | INFO     | mean y: 2876133.060357675
[2025-11-27 23:50:01] 2025-11-27 22:49:01,512 | INFO     | intersect: -4905614924.848615
[2025-11-27 23:50:01] 2025-11-27 22:49:01,513 | INFO     | chi2: 8.659178277586486
[2025-11-27 23:50:01] 2025-11-27 22:49:01,513 | INFO     | current chi2=8.659178277586486 (change=21.078330326320625 %)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,514 | INFO     | left removable region: 20
[2025-11-27 23:50:01] 2025-11-27 22:49:01,515 | INFO     | sum of square deviations: 722950495829.5273
[2025-11-27 23:50:01] 2025-11-27 22:49:01,569 | INFO     | sum of deviations: 2474930059915.2856
[2025-11-27 23:50:01] 2025-11-27 22:49:01,569 | INFO     | mean x: 1764242826.5950227
[2025-11-27 23:50:01] 2025-11-27 22:49:01,569 | INFO     | mean y: 2889478.0135746608
[2025-11-27 23:50:01] 2025-11-27 22:49:01,570 | INFO     | intersect: -6036773859.542984
[2025-11-27 23:50:01] 2025-11-27 22:49:01,571 | INFO     | chi2: 4.4776417755577596
[2025-11-27 23:50:01] 2025-11-27 22:49:01,571 | INFO     | current memory leak: 3.42 B/s (using 1326 data points, chi2=4.48)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | ..............................
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | . Timing measurements:
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | . get job = 0 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | . initial setup = 2 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,573 | INFO     | . payload setup = 126 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,574 | INFO     | . stage-in = 0 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,574 | INFO     | . payload execution = 82608 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,574 | INFO     | . stage-out = 5 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,574 | INFO     | . log creation = 2 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,574 | INFO     | ..............................
[2025-11-27 23:50:01] 2025-11-27 22:49:01,698 | INFO     | 
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | job summary report
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | --------------------------------------------------
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | PanDA job id: 6895372780
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | task id: 47556149
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | errors: (none)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | pilot state: finished 
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | transexitcode: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | exeerrorcode: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | exeerrordiag: 
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | exitcode: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:01,699 | INFO     | exitmsg: OK
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | cpuconsumptiontime: 314788 s
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | nevents: 1000
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | neventsw: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | pid: 26378
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | pgrp: 26378
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | corecount: 8
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | event service: False
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | sizes: {0: 2283487, 1: 2284343, 12: 2284343, 23: 2284371, 34: 2284399, 44: 2284427, 55: 2284583, 66: 2284611, 76: 2284639, 87: 2284695, 97: 2284985, 98: 2285293, 8
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | --------------------------------------------------
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | 
[2025-11-27 23:50:01] 2025-11-27 22:49:01,700 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-27 23:50:01] 2025-11-27 22:49:01,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,797 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:50:01] 2025-11-27 22:49:01,798 | INFO     | job 6895372780 has completed (purged errors)
[2025-11-27 23:50:01] 2025-11-27 22:49:01,798 | INFO     | overall cleanup function is called
[2025-11-27 23:50:01] 2025-11-27 22:49:02,814 | INFO     | --- collectZombieJob: --- 10, [26378]
[2025-11-27 23:50:01] 2025-11-27 22:49:02,814 | INFO     | zombie collector waiting for pid 26378
[2025-11-27 23:50:01] 2025-11-27 22:49:02,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:50:01] 2025-11-27 22:49:02,814 | INFO     | collected zombie processes
[2025-11-27 23:50:01] 2025-11-27 22:49:02,814 | INFO     | will attempt to kill all subprocesses of pid=26378
[2025-11-27 23:50:01] 2025-11-27 22:49:02,911 | INFO     | process IDs to be killed: [26378] (in reverse order)
[2025-11-27 23:50:01] 2025-11-27 22:49:03,733 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:50:01] 2025-11-27 22:49:03,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:50:01] 2025-11-27 22:49:03,736 | INFO     | did not find any defunct processes belonging to 26378
[2025-11-27 23:50:01] 2025-11-27 22:49:03,739 | INFO     | did not find any defunct processes belonging to 26378
[2025-11-27 23:50:01] 2025-11-27 22:49:03,793 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:50:01] 2025-11-27 22:49:03,793 | INFO     | ready for new job
[2025-11-27 23:50:01] 2025-11-27 22:49:03,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:50:01] 2025-11-27 22:49:03,798 | INFO     | ***************************************
[2025-11-27 23:50:01] 2025-11-27 22:49:03,799 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:50:01] 2025-11-27 22:49:03,799 | INFO     | ***************************************
[2025-11-27 23:50:01] 2025-11-27 22:49:03,799 | INFO     | 
[2025-11-27 23:50:01] 2025-11-27 22:49:03,799 | INFO     | pilot is running in a VM
[2025-11-27 23:50:01] 2025-11-27 22:49:03,800 | INFO     | architecture information:
[2025-11-27 23:50:01] 2025-11-27 22:49:03,803 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:50:01] 2025-11-27 22:49:04,039 | INFO     | cat /etc/os-release:
[2025-11-27 23:50:01] NAME="CentOS Linux"
[2025-11-27 23:50:01] VERSION="7 (Core)"
[2025-11-27 23:50:01] ID="centos"
[2025-11-27 23:50:01] ID_LIKE="rhel fedora"
[2025-11-27 23:50:01] VERSION_ID="7"
[2025-11-27 23:50:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:50:01] ANSI_COLOR="0;31"
[2025-11-27 23:50:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:50:01] HOME_URL="https://www.centos.org/"
[2025-11-27 23:50:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:50:01] 
[2025-11-27 23:50:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:50:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:50:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:50:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:50:01] 
[2025-11-27 23:50:01] 2025-11-27 22:49:04,039 | INFO     | ***************************************
[2025-11-27 23:50:01] 2025-11-27 22:49:04,543 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-27 23:50:01] 2025-11-27 22:49:04,811 | INFO     | sufficient remaining disk space (495017000960 B)
[2025-11-27 23:50:01] 2025-11-27 22:49:04,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:50:01] 2025-11-27 22:49:04,812 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:50:01] 2025-11-27 22:49:04,812 | INFO     | update_server=False
[2025-11-27 23:50:01] 2025-11-27 22:49:04,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:50:01] 2025-11-27 22:49:04,813 | INFO     | all job control threads have been joined
[2025-11-27 23:50:01] 2025-11-27 22:49:04,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:50:01] 2025-11-27 22:49:04,988 | INFO     | aborting loop
[2025-11-27 23:50:01] 2025-11-27 22:49:05,375 | INFO     | all payload control threads have been joined
[2025-11-27 23:50:01] 2025-11-27 22:49:05,620 | INFO     | all data control threads have been joined
[2025-11-27 23:50:01] 2025-11-27 22:49:05,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:50:01] 2025-11-27 22:49:05,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:50:01] 2025-11-27 22:49:05,818 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:05,819 | INFO     | [job] control thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:05,994 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,139 | INFO     | [job] validate thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,382 | INFO     | [payload] control thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,511 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,574 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,626 | INFO     | [data] control thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,667 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:50:01] 2025-11-27 22:49:06,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:06,965 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:07,146 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:07,383 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:07,711 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:07,727 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:09,654 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:50:01] 2025-11-27 22:49:33,671 | INFO     | PID=19456 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:50:01] 2025-11-27 22:49:33,672 | INFO     | .. there are 9 such processes running
[2025-11-27 23:50:01] 2025-11-27 22:49:33,673 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:50:01] 2025-11-27 22:49:33,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:50:01] 2025-11-27 22:49:33,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:50:01] 2025-11-27 22:49:51,421 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:50:01] 2025-11-27 22:49:51,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476203046720)>', '<ExcThread(monitor, started 140475629565696)>']
[2025-11-27 23:50:01] 2025-11-27 22:49:52,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:50:01] 2025-11-27 22:49:52,787 | INFO     | [monitor] control thread has ended
[2025-11-27 23:50:01] 2025-11-27 22:49:56,978 | INFO     | all workflow threads have been joined
[2025-11-27 23:50:01] 2025-11-27 22:49:56,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:50:01] 2025-11-27 22:49:56,979 | INFO     | traces error code: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:56,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:50:01] 2025-11-27 22:49:57,279 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:50:01] 2025-11-27 22:49:57,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:50:01] 2025-11-27 22:49:57,426 [wrapper] pilotpid: 19456
[2025-11-27 23:50:01] 2025-11-27 22:49:57,547 [wrapper] Pilot exit status: 0
[2025-11-27 23:50:01] 2025-11-27 22:49:57,882 [wrapper] pandaids: 6895372780
[2025-11-27 23:50:01] 2025-11-27 22:49:58,989 [wrapper] cleanup supervisor_pilot 29180 19457
[2025-11-27 23:50:01] 2025-11-27 22:49:59,085 [wrapper] Test setup, not cleaning
[2025-11-27 23:50:01] 2025-11-27 22:49:59,185 [wrapper] apfmon messages muted
[2025-11-27 23:50:01] 2025-11-27 22:49:59,285 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:50:01] 2025-11-27 22:49:59,388 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:50:01]  *** Error codes and diagnostics ***
[2025-11-27 23:50:01]     "exeErrorCode": 0,
[2025-11-27 23:50:01]     "exeErrorDiag": "",
[2025-11-27 23:50:01]     "pilotErrorCode": 0,
[2025-11-27 23:50:01]     "pilotErrorDiag": "",
[2025-11-27 23:50:01]  *** Listing of results directory ***
[2025-11-27 23:50:01] total 1334696
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc    576529 Nov 23 23:10 pilot3.tar.gz
[2025-11-27 23:50:01] -rwx------. 1 boinc boinc     36292 Nov 23 23:13 runpilot2-wrapper.sh
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc      5112 Nov 23 23:13 queuedata.json
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc       100 Nov 27 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:50:01] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 00:41 run_atlas
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc       105 Nov 27 00:41 job.xml
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc 408836287 Nov 27 00:41 EVNT.47483658._001197.pool.root.1
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc      6391 Nov 27 00:41 init_data.xml
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:41 start_atlas.sh
[2025-11-27 23:50:01] drwxrwx--x. 2 boinc boinc        68 Nov 27 00:41 shared
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc    590102 Nov 27 00:41 input.tar.gz
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc         0 Nov 27 00:41 boinc_lockfile
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc      2786 Nov 27 00:41 pandaJob.out
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc    991538 Nov 27 00:45 agis_schedconf.cvmfs.json
[2025-11-27 23:50:01] drwx------. 5 boinc boinc      4096 Nov 27 00:45 pilot3
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:30 boinc_task_state.xml
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc 927035983 Nov 27 23:46 HITS.47556149._001840.pool.root.1
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc      1029 Nov 27 23:47 memory_monitor_summary.json
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc   1516240 Nov 27 23:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc   2433952 Nov 27 23:47 log.47556149._001840.job.log.tgz.1
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc      7263 Nov 27 23:49 heartbeat.json
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc        95 Nov 27 23:49 pilot_heartbeat.json
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:49 boinc_mmap_file
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:49 wrapper_checkpoint.txt
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc      4884 Nov 27 23:49 pilotlog.txt
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc  11039769 Nov 27 23:49 log.47556149._001840.job.log.1
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc       353 Nov 27 23:50 output.list
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:50 runtime_log
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc  13496320 Nov 27 23:50 result.tar.gz
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc       662 Nov 27 23:50 XTVMDmMWXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQDLKDmR2fMAo.diag
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc      8817 Nov 27 23:50 runtime_log.err
[2025-11-27 23:50:01] -rw-r--r--. 1 boinc boinc     21224 Nov 27 23:50 stderr.txt
[2025-11-27 23:50:01] HITS file was successfully produced:
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc 927035983 Nov 27 23:46 shared/HITS.pool.root.1
[2025-11-27 23:50:01]  *** Contents of shared directory: ***
[2025-11-27 23:50:01] total 1318344
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc 408836287 Nov 27 00:41 ATLAS.root_0
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:41 start_atlas.sh
[2025-11-27 23:50:01] -rw-r--r--. 2 boinc boinc    590102 Nov 27 00:41 input.tar.gz
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc 927035983 Nov 27 23:46 HITS.pool.root.1
[2025-11-27 23:50:01] -rw-------. 1 boinc boinc  13496320 Nov 27 23:50 result.tar.gz
23:50:02 (15685): run_atlas exited; CPU time 315325.742537
23:50:02 (15685): called boinc_finish(0)

</stderr_txt>
]]>

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