Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:37:10 (2025346): wrapper (7.7.26015): starting
19:37:10 (2025346): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 19:37:11] Arguments: --nthreads 12
[2025-11-25 19:37:11] Threads: 12
[2025-11-25 19:37:11] Checking for CVMFS
[2025-11-25 19:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:37:11] 2.13.3.0 14095 5985 93344 153293 0 81 3873241 4097025 1043 130560 0 4658205 99.955 462838 19790 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 19:37:11] CVMFS is ok
[2025-11-25 19:37:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:37:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:37:11] Further information can be found at the LHC@home message board.
[2025-11-25 19:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:37:11] Checking for apptainer binary...
[2025-11-25 19:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:37:11] Running /usr/bin/apptainer --version
[2025-11-25 19:37:11] apptainer version 1.4.4-1.el9
[2025-11-25 19:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:37:11] pckelar7.cern.ch
[2025-11-25 19:37:11] apptainer works
[2025-11-25 19:37:11] Set ATHENA_PROC_NUMBER=12
[2025-11-25 19:37:11] Set ATHENA_CORE_NUMBER=12
[2025-11-25 19:37:11] Starting ATLAS job with PandaID=6895360312
[2025-11-25 19:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:33:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:33:40] 2025-11-26 06:32:39,293 | INFO     | monitor loop #3024: job 0:6895360312 is in state 'finished'
[2025-11-26 07:33:40] 2025-11-26 06:32:39,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,129 | INFO     | time since job start (42919s) is within the limit (172800.0s)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,397 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:33:40] 2025-11-26 06:32:41,402 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2850.102666666667
[2025-11-26 07:33:40] 2025-11-26 06:32:41,407 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895360312/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,408 | INFO     | extracted standard info from prmon json
[2025-11-26 07:33:40] 2025-11-26 06:32:41,408 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:33:40] 2025-11-26 06:32:41,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:33:40] 2025-11-26 06:32:41,427 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:33:40] 2025-11-26 06:32:41,429 | INFO     | sum of square deviations: 107731479767.63593
[2025-11-26 07:33:40] 2025-11-26 06:32:41,445 | INFO     | sum of deviations: 1708889807535.3767
[2025-11-26 07:33:40] 2025-11-26 06:32:41,445 | INFO     | mean x: 1764117285.9772403
[2025-11-26 07:33:40] 2025-11-26 06:32:41,445 | INFO     | mean y: 3624787.6486486485
[2025-11-26 07:33:40] 2025-11-26 06:32:41,446 | INFO     | intersect: -27979672720.24589
[2025-11-26 07:33:40] 2025-11-26 06:32:41,447 | INFO     | chi2: 5.581702099593402
[2025-11-26 07:33:40] 2025-11-26 06:32:41,448 | INFO     | sum of square deviations: 105449311620.32668
[2025-11-26 07:33:40] 2025-11-26 06:32:41,464 | INFO     | sum of deviations: 1971868099399.0686
[2025-11-26 07:33:40] 2025-11-26 06:32:41,464 | INFO     | mean x: 1764117133.4842408
[2025-11-26 07:33:40] 2025-11-26 06:32:41,464 | INFO     | mean y: 3642349.233524355
[2025-11-26 07:33:40] 2025-11-26 06:32:41,464 | INFO     | intersect: -32984778776.223667
[2025-11-26 07:33:40] 2025-11-26 06:32:41,465 | INFO     | chi2: 2.942026033287601
[2025-11-26 07:33:40] 2025-11-26 06:32:41,466 | INFO     | current chi2=2.942026033287601 (change=47.29159706495422 %)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,467 | INFO     | sum of square deviations: 103199524409.90765
[2025-11-26 07:33:40] 2025-11-26 06:32:41,482 | INFO     | sum of deviations: 2014112200645.3528
[2025-11-26 07:33:40] 2025-11-26 06:32:41,483 | INFO     | mean x: 1764116980.988456
[2025-11-26 07:33:40] 2025-11-26 06:32:41,483 | INFO     | mean y: 3645195.1688311687
[2025-11-26 07:33:40] 2025-11-26 06:32:41,483 | INFO     | intersect: -34426063227.33798
[2025-11-26 07:33:40] 2025-11-26 06:32:41,484 | INFO     | chi2: 2.629090983587336
[2025-11-26 07:33:40] 2025-11-26 06:32:41,484 | INFO     | current chi2=2.629090983587336 (change=10.636719259434011 %)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,484 | INFO     | right removable region: 692
[2025-11-26 07:33:40] 2025-11-26 06:32:41,486 | INFO     | sum of square deviations: 105448935190.29373
[2025-11-26 07:33:40] 2025-11-26 06:32:41,502 | INFO     | sum of deviations: 1456866779907.1157
[2025-11-26 07:33:40] 2025-11-26 06:32:41,502 | INFO     | mean x: 1764117438.482808
[2025-11-26 07:33:40] 2025-11-26 06:32:41,502 | INFO     | mean y: 3641598.676217765
[2025-11-26 07:33:40] 2025-11-26 06:32:41,502 | INFO     | intersect: -24369142131.59522
[2025-11-26 07:33:40] 2025-11-26 06:32:41,503 | INFO     | chi2: 3.290483088482274
[2025-11-26 07:33:40] 2025-11-26 06:32:41,503 | INFO     | current chi2=3.290483088482274 (change=41.04875126313229 %)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,505 | INFO     | sum of square deviations: 103199026897.79214
[2025-11-26 07:33:40] 2025-11-26 06:32:41,520 | INFO     | sum of deviations: 1378619548653.2468
[2025-11-26 07:33:40] 2025-11-26 06:32:41,520 | INFO     | mean x: 1764117590.982684
[2025-11-26 07:33:40] 2025-11-26 06:32:41,521 | INFO     | mean y: 3646900.770562771
[2025-11-26 07:33:40] 2025-11-26 06:32:41,521 | INFO     | intersect: -23562922185.781864
[2025-11-26 07:33:40] 2025-11-26 06:32:41,522 | INFO     | chi2: 3.212710714007261
[2025-11-26 07:33:40] 2025-11-26 06:32:41,522 | INFO     | current chi2=3.212710714007261 (change=2.3635549061850814 %)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,522 | INFO     | left removable region: 20
[2025-11-26 07:33:40] 2025-11-26 06:32:41,523 | INFO     | sum of square deviations: 94099007971.9761
[2025-11-26 07:33:40] 2025-11-26 06:32:41,538 | INFO     | sum of deviations: 1573666746835.497
[2025-11-26 07:33:40] 2025-11-26 06:32:41,538 | INFO     | mean x: 1764117560.4940476
[2025-11-26 07:33:40] 2025-11-26 06:32:41,538 | INFO     | mean y: 3675082.125
[2025-11-26 07:33:40] 2025-11-26 06:32:41,539 | INFO     | intersect: -29498582192.30673
[2025-11-26 07:33:40] 2025-11-26 06:32:41,540 | INFO     | chi2: 0.2167039214636196
[2025-11-26 07:33:40] 2025-11-26 06:32:41,540 | INFO     | current memory leak: 16.72 B/s (using 672 data points, chi2=0.22)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,541 | INFO     | could have reported an average CPU frequency of 2804 MHz (27 samples)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,541 | INFO     | ..............................
[2025-11-26 07:33:40] 2025-11-26 06:32:41,541 | INFO     | . Timing measurements:
[2025-11-26 07:33:40] 2025-11-26 06:32:41,541 | INFO     | . get job = 0 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . initial setup = 1 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . payload setup = 9 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . stage-in = 0 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . payload execution = 42873 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . stage-out = 2 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | . log creation = 0 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,542 | INFO     | ..............................
[2025-11-26 07:33:40] 2025-11-26 06:32:41,717 | INFO     | 
[2025-11-26 07:33:40] 2025-11-26 06:32:41,717 | INFO     | job summary report
[2025-11-26 07:33:40] 2025-11-26 06:32:41,717 | INFO     | --------------------------------------------------
[2025-11-26 07:33:40] 2025-11-26 06:32:41,717 | INFO     | PanDA job id: 6895360312
[2025-11-26 07:33:40] 2025-11-26 06:32:41,717 | INFO     | task id: 47556137
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | errors: (none)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | pilot state: finished 
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | transexitcode: 0
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | exeerrorcode: 0
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | exeerrordiag: 
[2025-11-26 07:33:40] 2025-11-26 06:32:41,718 | INFO     | exitcode: 0
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | exitmsg: OK
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | cpuconsumptiontime: 500912 s
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | nevents: 1000
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | neventsw: 0
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | pid: 2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:41,719 | INFO     | pgrp: 2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | corecount: 12
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | event service: False
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | sizes: {0: 2284081, 1: 2284336, 2: 2284336, 6: 2284626, 12: 2284654, 42886: 2328673, 42890: 2337667, 42893: 2337723, 42902: 2337993}
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | --------------------------------------------------
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | 
[2025-11-26 07:33:40] 2025-11-26 06:32:41,720 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 07:33:40] 2025-11-26 06:32:41,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,743 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,744 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:33:40] 2025-11-26 06:32:41,744 | INFO     | job 6895360312 has completed (purged errors)
[2025-11-26 07:33:40] 2025-11-26 06:32:41,744 | INFO     | overall cleanup function is called
[2025-11-26 07:33:40] 2025-11-26 06:32:42,767 | INFO     | --- collectZombieJob: --- 10, [2036660]
[2025-11-26 07:33:40] 2025-11-26 06:32:42,767 | INFO     | zombie collector waiting for pid 2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:42,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:33:40] 2025-11-26 06:32:42,768 | INFO     | collected zombie processes
[2025-11-26 07:33:40] 2025-11-26 06:32:42,768 | INFO     | will attempt to kill all subprocesses of pid=2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:42,946 | INFO     | process IDs to be killed: [2036660] (in reverse order)
[2025-11-26 07:33:40] 2025-11-26 06:32:43,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:33:40] 2025-11-26 06:32:43,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:33:40] 2025-11-26 06:32:43,008 | INFO     | did not find any defunct processes belonging to 2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:43,014 | INFO     | did not find any defunct processes belonging to 2036660
[2025-11-26 07:33:40] 2025-11-26 06:32:43,016 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:33:40] 2025-11-26 06:32:43,016 | INFO     | ready for new job
[2025-11-26 07:33:40] 2025-11-26 06:32:43,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:33:40] 2025-11-26 06:32:43,020 | INFO     | ***************************************
[2025-11-26 07:33:40] 2025-11-26 06:32:43,020 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:33:40] 2025-11-26 06:32:43,020 | INFO     | ***************************************
[2025-11-26 07:33:40] 2025-11-26 06:32:43,020 | INFO     | 
[2025-11-26 07:33:40] 2025-11-26 06:32:43,022 | INFO     | architecture information:
[2025-11-26 07:33:40] 2025-11-26 06:32:43,022 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:33:40] 2025-11-26 06:32:43,037 | INFO     | cat /etc/os-release:
[2025-11-26 07:33:40] NAME="CentOS Linux"
[2025-11-26 07:33:40] VERSION="7 (Core)"
[2025-11-26 07:33:40] ID="centos"
[2025-11-26 07:33:40] ID_LIKE="rhel fedora"
[2025-11-26 07:33:40] VERSION_ID="7"
[2025-11-26 07:33:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:33:40] ANSI_COLOR="0;31"
[2025-11-26 07:33:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:33:40] HOME_URL="https://www.centos.org/"
[2025-11-26 07:33:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:33:40] 
[2025-11-26 07:33:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:33:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:33:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:33:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:33:40] 
[2025-11-26 07:33:40] 2025-11-26 06:32:43,038 | INFO     | ***************************************
[2025-11-26 07:33:40] 2025-11-26 06:32:43,541 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 07:33:40] 2025-11-26 06:32:43,557 | INFO     | sufficient remaining disk space (1783400235008 B)
[2025-11-26 07:33:40] 2025-11-26 06:32:43,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:33:40] 2025-11-26 06:32:43,558 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:33:40] 2025-11-26 06:32:43,558 | INFO     | update_server=False
[2025-11-26 07:33:40] 2025-11-26 06:32:43,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:33:40] 2025-11-26 06:32:43,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:33:40] 2025-11-26 06:32:43,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:33:40] 2025-11-26 06:32:43,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:33:40] 2025-11-26 06:32:43,560 | INFO     | aborting loop
[2025-11-26 07:33:40] 2025-11-26 06:32:43,673 | INFO     | all job control threads have been joined
[2025-11-26 07:33:40] 2025-11-26 06:32:44,176 | INFO     | all payload control threads have been joined
[2025-11-26 07:33:40] 2025-11-26 06:32:44,309 | INFO     | all data control threads have been joined
[2025-11-26 07:33:40] 2025-11-26 06:32:44,564 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,565 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,565 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,678 | INFO     | [job] control thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,722 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,736 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:44,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:33:40] 2025-11-26 06:32:45,181 | INFO     | [payload] control thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,315 | INFO     | [data] control thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,402 | INFO     | [job] validate thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,438 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,715 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:45,818 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:46,007 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:46,922 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:32:47,566 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:33:40] 2025-11-26 06:33:14,434 | INFO     | PID=2029179 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:33:40] 2025-11-26 06:33:14,435 | INFO     | .. there are 2 such processes running
[2025-11-26 07:33:40] 2025-11-26 06:33:14,435 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:33:40] 2025-11-26 06:33:14,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:33:40] 2025-11-26 06:33:14,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:33:40] 2025-11-26 06:33:33,943 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:33:40] 2025-11-26 06:33:35,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217056552768)>', '<ExcThread(monitor, started 140216555779840)>']
[2025-11-26 07:33:40] 2025-11-26 06:33:35,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:33:40] 2025-11-26 06:33:35,535 | INFO     | [monitor] control thread has ended
[2025-11-26 07:33:40] 2025-11-26 06:33:40,130 | INFO     | all workflow threads have been joined
[2025-11-26 07:33:40] 2025-11-26 06:33:40,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:33:40] 2025-11-26 06:33:40,130 | INFO     | traces error code: 0
[2025-11-26 07:33:40] 2025-11-26 06:33:40,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:33:40] 2025-11-26 06:33:40,242 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:33:40] 2025-11-26 06:33:40,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:33:40] 2025-11-26 06:33:40,248 [wrapper] pilotpid: 2029179
[2025-11-26 07:33:40] 2025-11-26 06:33:40,251 [wrapper] Pilot exit status: 0
[2025-11-26 07:33:40] 2025-11-26 06:33:40,260 [wrapper] pandaids: 6895360312
[2025-11-26 07:33:40] 2025-11-26 06:33:40,298 [wrapper] cleanup supervisor_pilot 2258386 2029180
[2025-11-26 07:33:40] 2025-11-26 06:33:40,301 [wrapper] Test setup, not cleaning
[2025-11-26 07:33:40] 2025-11-26 06:33:40,304 [wrapper] apfmon messages muted
[2025-11-26 07:33:40] 2025-11-26 06:33:40,306 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:33:40] 2025-11-26 06:33:40,309 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:33:40]  *** Error codes and diagnostics ***
[2025-11-26 07:33:40]     "exeErrorCode": 0,
[2025-11-26 07:33:40]     "exeErrorDiag": "",
[2025-11-26 07:33:40]     "pilotErrorCode": 0,
[2025-11-26 07:33:40]     "pilotErrorDiag": "",
[2025-11-26 07:33:40]  *** Listing of results directory ***
[2025-11-26 07:33:40] total 1327528
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc    576529 Nov 23 14:20 pilot3.tar.gz
[2025-11-26 07:33:40] -rwx------ 1 boinc boinc     36292 Nov 23 14:21 runpilot2-wrapper.sh
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc      5112 Nov 23 14:21 queuedata.json
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc       100 Nov 25 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:33:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 19:37 run_atlas
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc       105 Nov 25 19:37 job.xml
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc      6252 Nov 25 19:37 init_data.xml
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc 410461339 Nov 25 19:37 EVNT.47483658._000748.pool.root.1
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:37 start_atlas.sh
[2025-11-26 07:33:40] drwxrwx--x 2 boinc boinc      4096 Nov 25 19:37 shared
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc    590094 Nov 25 19:37 input.tar.gz
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:37 boinc_lockfile
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc      2782 Nov 25 19:37 pandaJob.out
[2025-11-26 07:33:40] -rw------- 1 boinc boinc    991543 Nov 25 19:37 agis_schedconf.cvmfs.json
[2025-11-26 07:33:40] drwx------ 5 boinc boinc      4096 Nov 25 19:37 pilot3
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc       533 Nov 26 07:23 boinc_task_state.xml
[2025-11-26 07:33:40] -rw------- 1 boinc boinc 928372159 Nov 26 07:31 HITS.47556137._007431.pool.root.1
[2025-11-26 07:33:40] -rw------- 1 boinc boinc      1035 Nov 26 07:32 memory_monitor_summary.json
[2025-11-26 07:33:40] -rw------- 1 boinc boinc   1516240 Nov 26 07:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:33:40] -rw------- 1 boinc boinc   2384815 Nov 26 07:32 log.47556137._007431.job.log.tgz.1
[2025-11-26 07:33:40] -rw------- 1 boinc boinc        95 Nov 26 07:32 pilot_heartbeat.json
[2025-11-26 07:33:40] -rw------- 1 boinc boinc      8620 Nov 26 07:32 heartbeat.json
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc        29 Nov 26 07:33 wrapper_checkpoint.txt
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc      8192 Nov 26 07:33 boinc_mmap_file
[2025-11-26 07:33:40] -rw------- 1 boinc boinc      4825 Nov 26 07:33 pilotlog.txt
[2025-11-26 07:33:40] -rw------- 1 boinc boinc   5934398 Nov 26 07:33 log.47556137._007431.job.log.1
[2025-11-26 07:33:40] -rw------- 1 boinc boinc       353 Nov 26 07:33 output.list
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc       620 Nov 26 07:33 runtime_log
[2025-11-26 07:33:40] -rw------- 1 boinc boinc   8335360 Nov 26 07:33 result.tar.gz
[2025-11-26 07:33:40] -rw------- 1 boinc boinc       665 Nov 26 07:33 VIgLDmZDPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOYIKDmvwLAyn.diag
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc      8842 Nov 26 07:33 runtime_log.err
[2025-11-26 07:33:40] -rw-r--r-- 1 boinc boinc     21325 Nov 26 07:33 stderr.txt
[2025-11-26 07:33:40] HITS file was successfully produced:
[2025-11-26 07:33:40] -rw------- 1 boinc boinc 928372159 Nov 26 07:31 shared/HITS.pool.root.1
[2025-11-26 07:33:40]  *** Contents of shared directory: ***
[2025-11-26 07:33:40] total 1316204
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc 410461339 Nov 25 19:37 ATLAS.root_0
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:37 start_atlas.sh
[2025-11-26 07:33:40] -rw-r--r-- 2 boinc boinc    590094 Nov 25 19:37 input.tar.gz
[2025-11-26 07:33:40] -rw------- 1 boinc boinc 928372159 Nov 26 07:31 HITS.pool.root.1
[2025-11-26 07:33:40] -rw------- 1 boinc boinc   8335360 Nov 26 07:33 result.tar.gz
07:33:41 (2025346): run_atlas exited; CPU time 501164.265529
07:33:41 (2025346): called boinc_finish(0)

</stderr_txt>
]]>

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