Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:03 (12918): wrapper (7.7.26015): starting
07:08:03 (12918): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 07:08:03] Arguments: --nthreads 8
[2025-11-27 07:08:03] Threads: 8
[2025-11-27 07:08:03] Checking for CVMFS
[2025-11-27 07:08:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:08:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:08:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:08:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:08:06] 2.11.2.0 942 173235 127536 153349 2 85 13479847 25165825 1288 130560 12 60110758 99.906 30608435 2295 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 07:08:06] CVMFS is ok
[2025-11-27 07:08:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:08:06] Checking for apptainer binary...
[2025-11-27 07:08:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:08:06] Running /usr/bin/apptainer --version
[2025-11-27 07:08:06] apptainer version 1.3.2-1.el7
[2025-11-27 07:08:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:08:10] cg-vwn460.simple-grid.lan
[2025-11-27 07:08:10] apptainer works
[2025-11-27 07:08:10] Set ATHENA_PROC_NUMBER=8
[2025-11-27 07:08:10] Set ATHENA_CORE_NUMBER=8
[2025-11-27 07:08:10] Starting ATLAS job with PandaID=6895372569
[2025-11-27 07:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:42:36]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:42:36] 2025-11-28 03:41:47,826 | INFO     | monitor loop #5255: job 0:6895372569 is in state 'finished'
[2025-11-28 04:42:36] 2025-11-28 03:41:47,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:42:36] 2025-11-28 03:41:47,873 | INFO     | time since job start (77382s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:49,879 | INFO     | time since job start (77384s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:50,331 | INFO     | monitor loop #5256: job 0:6895372569 is in state 'finished'
[2025-11-28 04:42:36] 2025-11-28 03:41:50,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:42:36] 2025-11-28 03:41:51,890 | INFO     | time since job start (77386s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:52,836 | INFO     | monitor loop #5257: job 0:6895372569 is in state 'finished'
[2025-11-28 04:42:36] 2025-11-28 03:41:52,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:42:36] 2025-11-28 03:41:53,909 | INFO     | time since job start (77388s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:55,343 | INFO     | monitor loop #5258: job 0:6895372569 is in state 'finished'
[2025-11-28 04:42:36] 2025-11-28 03:41:55,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:42:36] 2025-11-28 03:41:55,916 | INFO     | time since job start (77390s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,680 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 04:42:36] 2025-11-28 03:41:57,681 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-11-28 04:42:36] 2025-11-28 03:41:57,683 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895372569/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,683 | INFO     | extracted standard info from prmon json
[2025-11-28 04:42:36] 2025-11-28 03:41:57,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:42:36] 2025-11-28 03:41:57,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:42:36] 2025-11-28 03:41:57,720 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:42:36] 2025-11-28 03:41:57,722 | INFO     | sum of square deviations: 618806611676.8214
[2025-11-28 04:42:36] 2025-11-28 03:41:57,781 | INFO     | sum of deviations: 2398747649074.8574
[2025-11-28 04:42:36] 2025-11-28 03:41:57,782 | INFO     | mean x: 1764262794.0119143
[2025-11-28 04:42:36] 2025-11-28 03:41:57,782 | INFO     | mean y: 2833672.4090548055
[2025-11-28 04:42:36] 2025-11-28 03:41:57,782 | INFO     | intersect: -6836170872.190961
[2025-11-28 04:42:36] 2025-11-28 03:41:57,784 | INFO     | chi2: 23.172852581428447
[2025-11-28 04:42:36] 2025-11-28 03:41:57,785 | INFO     | sum of square deviations: 611463634649.181
[2025-11-28 04:42:36] 2025-11-28 03:41:57,844 | INFO     | sum of deviations: 2814509370670.3154
[2025-11-28 04:42:36] 2025-11-28 03:41:57,844 | INFO     | mean x: 1764262641.515949
[2025-11-28 04:42:36] 2025-11-28 03:41:57,844 | INFO     | mean y: 2842308.0845295056
[2025-11-28 04:42:36] 2025-11-28 03:41:57,844 | INFO     | intersect: -8117892034.063404
[2025-11-28 04:42:36] 2025-11-28 03:41:57,846 | INFO     | chi2: 19.937433925828184
[2025-11-28 04:42:36] 2025-11-28 03:41:57,846 | INFO     | current chi2=19.937433925828184 (change=13.962107790705247 %)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,846 | INFO     | right removable region: 1253
[2025-11-28 04:42:36] 2025-11-28 03:41:57,848 | INFO     | sum of square deviations: 611462857509.1808
[2025-11-28 04:42:36] 2025-11-28 03:41:57,870 | INFO     | monitor loop #5259: job 0:6895372569 is in state 'finished'
[2025-11-28 04:42:36] 2025-11-28 03:41:57,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,898 | INFO     | sum of deviations: 1881293243235.4587
[2025-11-28 04:42:36] 2025-11-28 03:41:57,899 | INFO     | mean x: 1764262946.515949
[2025-11-28 04:42:36] 2025-11-28 03:41:57,899 | INFO     | mean y: 2844417.177033493
[2025-11-28 04:42:36] 2025-11-28 03:41:57,899 | INFO     | intersect: -5425279171.705554
[2025-11-28 04:42:36] 2025-11-28 03:41:57,900 | INFO     | chi2: 18.64317661191709
[2025-11-28 04:42:36] 2025-11-28 03:41:57,901 | INFO     | current chi2=18.64317661191709 (change=19.547338652391893 %)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,901 | INFO     | left removable region: 10
[2025-11-28 04:42:36] 2025-11-28 03:41:57,902 | INFO     | sum of square deviations: 595512513356.227
[2025-11-28 04:42:36] 2025-11-28 03:41:57,940 | INFO     | time since job start (77392s) is within the limit (172800.0s)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,951 | INFO     | sum of deviations: 1962512823395.9578
[2025-11-28 04:42:36] 2025-11-28 03:41:57,951 | INFO     | mean x: 1764262916.0249398
[2025-11-28 04:42:36] 2025-11-28 03:41:57,951 | INFO     | mean y: 2864570.3885760256
[2025-11-28 04:42:36] 2025-11-28 03:41:57,951 | INFO     | intersect: -5811267826.3050585
[2025-11-28 04:42:36] 2025-11-28 03:41:57,952 | INFO     | chi2: 11.23074730458616
[2025-11-28 04:42:36] 2025-11-28 03:41:57,953 | INFO     | current memory leak: 3.30 B/s (using 1243 data points, chi2=11.23)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | could have reported an average CPU frequency of 2250 MHz (43 samples)
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | ..............................
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . Timing measurements:
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . get job = 0 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . initial setup = 12 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . payload setup = 150 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . stage-in = 0 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,954 | INFO     | . payload execution = 76949 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,955 | INFO     | . stage-out = 3 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,955 | INFO     | . log creation = 0 s
[2025-11-28 04:42:36] 2025-11-28 03:41:57,955 | INFO     | ..............................
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | 
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | job summary report
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | --------------------------------------------------
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | PanDA job id: 6895372569
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | task id: 47556149
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | errors: (none)
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | pilot state: finished 
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | transexitcode: 0
[2025-11-28 04:42:36] 2025-11-28 03:41:58,547 | INFO     | exeerrorcode: 0
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | exeerrordiag: 
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | exitcode: 0
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | exitmsg: OK
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | cpuconsumptiontime: 288461 s
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | nevents: 1000
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | neventsw: 0
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | pid: 23288
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | pgrp: 23288
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | corecount: 8
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | event service: False
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | sizes: {0: 2284037, 1: 2284292, 12: 2284292, 23: 2284320, 33: 2284348, 44: 2284404, 55: 2284560, 66: 2284588, 76: 2284616, 87: 2284672, 88: 2284962, 98: 2285270, 7
[2025-11-28 04:42:36] 2025-11-28 03:41:58,548 | INFO     | --------------------------------------------------
[2025-11-28 04:42:36] 2025-11-28 03:41:58,549 | INFO     | 
[2025-11-28 04:42:36] 2025-11-28 03:41:58,549 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-28 04:42:36] 2025-11-28 03:41:59,215 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,215 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,215 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | job 6895372569 has completed (purged errors)
[2025-11-28 04:42:36] 2025-11-28 03:41:59,217 | INFO     | overall cleanup function is called
[2025-11-28 04:42:36] 2025-11-28 03:42:00,241 | INFO     | --- collectZombieJob: --- 10, [23288]
[2025-11-28 04:42:36] 2025-11-28 03:42:00,241 | INFO     | zombie collector waiting for pid 23288
[2025-11-28 04:42:36] 2025-11-28 03:42:00,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:42:36] 2025-11-28 03:42:00,241 | INFO     | collected zombie processes
[2025-11-28 04:42:36] 2025-11-28 03:42:00,241 | INFO     | will attempt to kill all subprocesses of pid=23288
[2025-11-28 04:42:36] 2025-11-28 03:42:00,358 | INFO     | process IDs to be killed: [23288] (in reverse order)
[2025-11-28 04:42:36] 2025-11-28 03:42:01,009 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:42:36] 2025-11-28 03:42:01,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:42:36] 2025-11-28 03:42:01,012 | INFO     | did not find any defunct processes belonging to 23288
[2025-11-28 04:42:36] 2025-11-28 03:42:01,014 | INFO     | did not find any defunct processes belonging to 23288
[2025-11-28 04:42:36] 2025-11-28 03:42:01,055 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:42:36] 2025-11-28 03:42:01,055 | INFO     | ready for new job
[2025-11-28 04:42:36] 2025-11-28 03:42:01,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:42:36] 2025-11-28 03:42:01,059 | INFO     | ***************************************
[2025-11-28 04:42:36] 2025-11-28 03:42:01,060 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:42:36] 2025-11-28 03:42:01,060 | INFO     | ***************************************
[2025-11-28 04:42:36] 2025-11-28 03:42:01,060 | INFO     | 
[2025-11-28 04:42:36] 2025-11-28 03:42:01,060 | INFO     | pilot is running in a VM
[2025-11-28 04:42:36] 2025-11-28 03:42:01,060 | INFO     | architecture information:
[2025-11-28 04:42:36] 2025-11-28 03:42:01,067 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:42:36] 2025-11-28 03:42:01,279 | INFO     | cat /etc/os-release:
[2025-11-28 04:42:36] NAME="CentOS Linux"
[2025-11-28 04:42:36] VERSION="7 (Core)"
[2025-11-28 04:42:36] ID="centos"
[2025-11-28 04:42:36] ID_LIKE="rhel fedora"
[2025-11-28 04:42:36] VERSION_ID="7"
[2025-11-28 04:42:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:42:36] ANSI_COLOR="0;31"
[2025-11-28 04:42:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:42:36] HOME_URL="https://www.centos.org/"
[2025-11-28 04:42:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:42:36] 
[2025-11-28 04:42:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:42:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:42:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:42:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:42:36] 
[2025-11-28 04:42:36] 2025-11-28 03:42:01,279 | INFO     | ***************************************
[2025-11-28 04:42:36] 2025-11-28 03:42:01,783 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-28 04:42:36] 2025-11-28 03:42:02,076 | INFO     | sufficient remaining disk space (495261319168 B)
[2025-11-28 04:42:36] 2025-11-28 03:42:02,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:42:36] 2025-11-28 03:42:02,077 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:42:36] 2025-11-28 03:42:02,077 | INFO     | update_server=False
[2025-11-28 04:42:36] 2025-11-28 03:42:02,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:42:36] 2025-11-28 03:42:02,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:42:36] 2025-11-28 03:42:02,078 | INFO     | aborting loop
[2025-11-28 04:42:36] 2025-11-28 03:42:02,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:42:36] 2025-11-28 03:42:02,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:42:36] 2025-11-28 03:42:02,337 | INFO     | all data control threads have been joined
[2025-11-28 04:42:36] 2025-11-28 03:42:03,084 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,086 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:42:36] 2025-11-28 03:42:03,319 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,343 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,344 | INFO     | [data] control thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,358 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,417 | INFO     | all job control threads have been joined
[2025-11-28 04:42:36] 2025-11-28 03:42:03,425 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,566 | INFO     | all payload control threads have been joined
[2025-11-28 04:42:36] 2025-11-28 03:42:03,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,800 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:03,899 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:04,095 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:04,186 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:04,424 | INFO     | [job] control thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:04,501 | INFO     | [job] validate thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:04,573 | INFO     | [payload] control thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:06,290 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:42:36] 2025-11-28 03:42:19,462 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:42:36] 2025-11-28 03:42:19,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212844537664)>', '<ExcThread(monitor, started 140211824621312)>']
[2025-11-28 04:42:36] 2025-11-28 03:42:24,615 | INFO     | all workflow threads have been joined
[2025-11-28 04:42:36] 2025-11-28 03:42:24,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:42:36] 2025-11-28 03:42:24,615 | INFO     | traces error code: 0
[2025-11-28 04:42:36] 2025-11-28 03:42:24,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:42:36] 2025-11-28 03:42:31,111 | INFO     | PID=16760 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | INFO     | .. there are 9 such processes running
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:42:36] 2025-11-28 03:42:31,112 | INFO     | [monitor] control thread has ended
[2025-11-28 04:42:36] 2025-11-28 03:42:31,425 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:42:36] 2025-11-28 03:42:31,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:42:36] 2025-11-28 03:42:31,567 [wrapper] pilotpid: 16760
[2025-11-28 04:42:36] 2025-11-28 03:42:31,665 [wrapper] Pilot exit status: 0
[2025-11-28 04:42:36] 2025-11-28 03:42:32,102 [wrapper] pandaids: 6895372569
[2025-11-28 04:42:36] 2025-11-28 03:42:32,750 [wrapper] cleanup supervisor_pilot  7053 16761
[2025-11-28 04:42:36] 2025-11-28 03:42:32,853 [wrapper] Test setup, not cleaning
[2025-11-28 04:42:36] 2025-11-28 03:42:32,939 [wrapper] apfmon messages muted
[2025-11-28 04:42:36] 2025-11-28 03:42:33,009 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:42:36] 2025-11-28 03:42:33,115 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:42:36]  *** Error codes and diagnostics ***
[2025-11-28 04:42:36]     "exeErrorCode": 0,
[2025-11-28 04:42:36]     "exeErrorDiag": "",
[2025-11-28 04:42:36]     "pilotErrorCode": 0,
[2025-11-28 04:42:36]     "pilotErrorDiag": "",
[2025-11-28 04:42:36]  *** Listing of results directory ***
[2025-11-28 04:42:36] total 1324096
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc    576529 Nov 23 22:55 pilot3.tar.gz
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc      5112 Nov 23 22:57 queuedata.json
[2025-11-28 04:42:36] -rwx------. 1 boinc boinc     36292 Nov 23 23:00 runpilot2-wrapper.sh
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc       100 Nov 27 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:42:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 07:08 run_atlas
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc       105 Nov 27 07:08 job.xml
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc      6392 Nov 27 07:08 init_data.xml
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc 408017866 Nov 27 07:08 EVNT.47483658._001195.pool.root.1
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:08 start_atlas.sh
[2025-11-28 04:42:36] drwxrwx--x. 2 boinc boinc        68 Nov 27 07:08 shared
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc    590098 Nov 27 07:08 input.tar.gz
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc         0 Nov 27 07:08 boinc_lockfile
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc      2785 Nov 27 07:08 pandaJob.out
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc    991578 Nov 27 07:11 agis_schedconf.cvmfs.json
[2025-11-28 04:42:36] drwx------. 5 boinc boinc      4096 Nov 27 07:12 pilot3
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc       533 Nov 28 04:16 boinc_task_state.xml
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc 918523025 Nov 28 04:39 HITS.47556149._001819.pool.root.1
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc      1030 Nov 28 04:40 memory_monitor_summary.json
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc   1516240 Nov 28 04:40 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc   2369602 Nov 28 04:40 log.47556149._001819.job.log.tgz.1
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc        95 Nov 28 04:41 pilot_heartbeat.json
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc      8623 Nov 28 04:41 heartbeat.json
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc       820 Nov 28 04:42 pilotlog.txt
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc  10347332 Nov 28 04:42 log.47556149._001819.job.log.1
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc       353 Nov 28 04:42 output.list
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc       620 Nov 28 04:42 runtime_log
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc  12738560 Nov 28 04:42 result.tar.gz
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc       662 Nov 28 04:42 ZMBNDmKJXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6CLKDmT6rWxn.diag
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc      8817 Nov 28 04:42 runtime_log.err
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc      8192 Nov 28 04:42 boinc_mmap_file
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc        29 Nov 28 04:42 wrapper_checkpoint.txt
[2025-11-28 04:42:36] -rw-r--r--. 1 boinc boinc     21439 Nov 28 04:42 stderr.txt
[2025-11-28 04:42:36] HITS file was successfully produced:
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc 918523025 Nov 28 04:39 shared/HITS.pool.root.1
[2025-11-28 04:42:36]  *** Contents of shared directory: ***
[2025-11-28 04:42:36] total 1308488
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc 408017866 Nov 27 07:08 ATLAS.root_0
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:08 start_atlas.sh
[2025-11-28 04:42:36] -rw-r--r--. 2 boinc boinc    590098 Nov 27 07:08 input.tar.gz
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc 918523025 Nov 28 04:39 HITS.pool.root.1
[2025-11-28 04:42:36] -rw-------. 1 boinc boinc  12738560 Nov 28 04:42 result.tar.gz
04:42:37 (12918): run_atlas exited; CPU time 288911.170986
04:42:37 (12918): called boinc_finish(0)

</stderr_txt>
]]>

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