Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:16:16 (19156): wrapper (7.7.26015): starting
00:16:16 (19156): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:16:16] Arguments: --nthreads 8
[2025-11-27 00:16:16] Threads: 8
[2025-11-27 00:16:16] Checking for CVMFS
[2025-11-27 00:16:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:16:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:16:18] 2.11.2.0 16343 285856 136432 153340 0 62 17685811 25165824 1288 130560 14 140925251 99.872 76734233 2664 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 00:16:18] CVMFS is ok
[2025-11-27 00:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:16:18] Checking for apptainer binary...
[2025-11-27 00:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:16:18] Running /usr/bin/apptainer --version
[2025-11-27 00:16:18] apptainer version 1.3.2-1.el7
[2025-11-27 00:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:16:25] cg-vwn436.simple-grid.lan
[2025-11-27 00:16:25] apptainer works
[2025-11-27 00:16:25] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:16:25] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:16:25] Starting ATLAS job with PandaID=6895372678
[2025-11-27 00:16:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:41:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:41:20] 2025-11-27 22:40:36,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:41:20] 2025-11-27 22:40:38,095 | INFO     | time since job start (84013s) is within the limit (172800.0s)
[2025-11-27 23:41:20] 2025-11-27 22:40:39,185 | INFO     | monitor loop #5661: job 0:6895372678 is in state 'finished'
[2025-11-27 23:41:20] 2025-11-27 22:40:39,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:41:20] 2025-11-27 22:40:40,102 | INFO     | time since job start (84015s) is within the limit (172800.0s)
[2025-11-27 23:41:20] 2025-11-27 22:40:41,692 | INFO     | monitor loop #5662: job 0:6895372678 is in state 'finished'
[2025-11-27 23:41:20] 2025-11-27 22:40:41,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:41:20] 2025-11-27 22:40:42,111 | INFO     | time since job start (84017s) is within the limit (172800.0s)
[2025-11-27 23:41:20] 2025-11-27 22:40:43,356 | INFO     | PID=22947 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:41:20] 2025-11-27 22:40:43,356 | INFO     | .. there are 9 such processes running
[2025-11-27 23:41:20] 2025-11-27 22:40:44,198 | INFO     | monitor loop #5663: job 0:6895372678 is in state 'finished'
[2025-11-27 23:41:20] 2025-11-27 22:40:44,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:41:20] 2025-11-27 22:40:44,357 | INFO     | time since job start (84019s) is within the limit (172800.0s)
[2025-11-27 23:41:20] 2025-11-27 22:40:45,949 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:41:20] 2025-11-27 22:40:45,951 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:41:20] 2025-11-27 22:40:45,954 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895372678/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:41:20] 2025-11-27 22:40:45,955 | INFO     | extracted standard info from prmon json
[2025-11-27 23:41:20] 2025-11-27 22:40:45,955 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:41:20] 2025-11-27 22:40:45,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:41:20] 2025-11-27 22:40:45,990 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:41:20] 2025-11-27 22:40:45,992 | INFO     | sum of square deviations: 792105708646.1177
[2025-11-27 23:41:20] 2025-11-27 22:40:46,074 | INFO     | sum of deviations: 2965521992942.9087
[2025-11-27 23:41:20] 2025-11-27 22:40:46,074 | INFO     | mean x: 1764241429.0709584
[2025-11-27 23:41:20] 2025-11-27 22:40:46,074 | INFO     | mean y: 2846647.413313826
[2025-11-27 23:41:20] 2025-11-27 22:40:46,074 | INFO     | intersect: -6602202024.326993
[2025-11-27 23:41:20] 2025-11-27 22:40:46,081 | INFO     | chi2: 19.99593024638086
[2025-11-27 23:41:20] 2025-11-27 22:40:46,083 | INFO     | sum of square deviations: 783446169532.8611
[2025-11-27 23:41:20] 2025-11-27 22:40:46,155 | INFO     | sum of deviations: 3427312391940.749
[2025-11-27 23:41:20] 2025-11-27 22:40:46,155 | INFO     | mean x: 1764241276.57489
[2025-11-27 23:41:20] 2025-11-27 22:40:46,156 | INFO     | mean y: 2854779.296622614
[2025-11-27 23:41:20] 2025-11-27 22:40:46,156 | INFO     | intersect: -7715104953.895826
[2025-11-27 23:41:20] 2025-11-27 22:40:46,157 | INFO     | chi2: 16.689847262513393
[2025-11-27 23:41:20] 2025-11-27 22:40:46,158 | INFO     | current chi2=16.689847262513393 (change=16.53377933975263 %)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,158 | INFO     | right removable region: 1361
[2025-11-27 23:41:20] 2025-11-27 22:40:46,160 | INFO     | sum of square deviations: 783445276492.8612
[2025-11-27 23:41:20] 2025-11-27 22:40:46,219 | INFO     | sum of deviations: 2401852624700.561
[2025-11-27 23:41:20] 2025-11-27 22:40:46,219 | INFO     | mean x: 1764241581.57489
[2025-11-27 23:41:20] 2025-11-27 22:40:46,220 | INFO     | mean y: 2856572.0631424375
[2025-11-27 23:41:20] 2025-11-27 22:40:46,220 | INFO     | intersect: -5405878920.325942
[2025-11-27 23:41:20] 2025-11-27 22:40:46,222 | INFO     | chi2: 15.476694177440706
[2025-11-27 23:41:20] 2025-11-27 22:40:46,222 | INFO     | current chi2=15.476694177440706 (change=22.600779324873404 %)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,222 | INFO     | left removable region: 10
[2025-11-27 23:41:20] 2025-11-27 22:40:46,224 | INFO     | sum of square deviations: 764616062043.5486
[2025-11-27 23:41:20] 2025-11-27 22:40:46,291 | INFO     | sum of deviations: 2496362808277.8525
[2025-11-27 23:41:20] 2025-11-27 22:40:46,291 | INFO     | mean x: 1764241551.0836418
[2025-11-27 23:41:20] 2025-11-27 22:40:46,291 | INFO     | mean y: 2875345.9481865284
[2025-11-27 23:41:20] 2025-11-27 22:40:46,291 | INFO     | intersect: -5757122660.335906
[2025-11-27 23:41:20] 2025-11-27 22:40:46,293 | INFO     | chi2: 8.026475836919552
[2025-11-27 23:41:20] 2025-11-27 22:40:46,293 | INFO     | current memory leak: 3.26 B/s (using 1351 data points, chi2=8.03)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | ..............................
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . Timing measurements:
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . get job = 0 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . initial setup = 7 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . payload setup = 154 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . stage-in = 0 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . payload execution = 83538 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,295 | INFO     | . stage-out = 5 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,296 | INFO     | . log creation = 2 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,296 | INFO     | ..............................
[2025-11-27 23:41:20] 2025-11-27 22:40:46,364 | INFO     | time since job start (84021s) is within the limit (172800.0s)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | 
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | job summary report
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | --------------------------------------------------
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | PanDA job id: 6895372678
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | task id: 47556137
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | errors: (none)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:41:20] 2025-11-27 22:40:46,410 | INFO     | pilot state: finished 
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | transexitcode: 0
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | exeerrorcode: 0
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | exeerrordiag: 
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | exitcode: 0
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | exitmsg: OK
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | cpuconsumptiontime: 315884 s
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | nevents: 1000
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | neventsw: 0
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | pid: 29581
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | pgrp: 29581
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | corecount: 8
[2025-11-27 23:41:20] 2025-11-27 22:40:46,411 | INFO     | event service: False
[2025-11-27 23:41:20] 2025-11-27 22:40:46,412 | INFO     | sizes: {0: 2284087, 1: 2284171, 2: 2284370, 13: 2284370, 24: 2284426, 34: 2284454, 45: 2284610, 56: 2284638, 67: 2284666, 77: 2284694, 88: 2284750, 99: 2285058, 11
[2025-11-27 23:41:20] 2025-11-27 22:40:46,412 | INFO     | --------------------------------------------------
[2025-11-27 23:41:20] 2025-11-27 22:40:46,412 | INFO     | 
[2025-11-27 23:41:20] 2025-11-27 22:40:46,412 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 23:41:20] 2025-11-27 22:40:46,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:41:20] 2025-11-27 22:40:46,839 | INFO     | job 6895372678 has completed (purged errors)
[2025-11-27 23:41:20] 2025-11-27 22:40:46,840 | INFO     | overall cleanup function is called
[2025-11-27 23:41:20] 2025-11-27 22:40:47,863 | INFO     | --- collectZombieJob: --- 10, [29581]
[2025-11-27 23:41:20] 2025-11-27 22:40:47,863 | INFO     | zombie collector waiting for pid 29581
[2025-11-27 23:41:20] 2025-11-27 22:40:47,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:41:20] 2025-11-27 22:40:47,863 | INFO     | collected zombie processes
[2025-11-27 23:41:20] 2025-11-27 22:40:47,863 | INFO     | will attempt to kill all subprocesses of pid=29581
[2025-11-27 23:41:20] 2025-11-27 22:40:47,986 | INFO     | process IDs to be killed: [29581] (in reverse order)
[2025-11-27 23:41:20] 2025-11-27 22:40:48,983 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:41:20] 2025-11-27 22:40:48,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:41:20] 2025-11-27 22:40:48,987 | INFO     | did not find any defunct processes belonging to 29581
[2025-11-27 23:41:20] 2025-11-27 22:40:48,989 | INFO     | did not find any defunct processes belonging to 29581
[2025-11-27 23:41:20] 2025-11-27 22:40:49,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:41:20] 2025-11-27 22:40:49,017 | INFO     | ready for new job
[2025-11-27 23:41:20] 2025-11-27 22:40:49,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:41:20] 2025-11-27 22:40:49,022 | INFO     | ***************************************
[2025-11-27 23:41:20] 2025-11-27 22:40:49,023 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:41:20] 2025-11-27 22:40:49,023 | INFO     | ***************************************
[2025-11-27 23:41:20] 2025-11-27 22:40:49,023 | INFO     | 
[2025-11-27 23:41:20] 2025-11-27 22:40:49,023 | INFO     | pilot is running in a VM
[2025-11-27 23:41:20] 2025-11-27 22:40:49,024 | INFO     | architecture information:
[2025-11-27 23:41:20] 2025-11-27 22:40:49,027 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:41:20] 2025-11-27 22:40:49,189 | INFO     | cat /etc/os-release:
[2025-11-27 23:41:20] NAME="CentOS Linux"
[2025-11-27 23:41:20] VERSION="7 (Core)"
[2025-11-27 23:41:20] ID="centos"
[2025-11-27 23:41:20] ID_LIKE="rhel fedora"
[2025-11-27 23:41:20] VERSION_ID="7"
[2025-11-27 23:41:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:41:20] ANSI_COLOR="0;31"
[2025-11-27 23:41:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:41:20] HOME_URL="https://www.centos.org/"
[2025-11-27 23:41:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:41:20] 
[2025-11-27 23:41:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:41:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:41:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:41:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:41:20] 
[2025-11-27 23:41:20] 2025-11-27 22:40:49,189 | INFO     | ***************************************
[2025-11-27 23:41:20] 2025-11-27 22:40:49,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 23:41:20] 2025-11-27 22:40:49,860 | INFO     | sufficient remaining disk space (495177433088 B)
[2025-11-27 23:41:20] 2025-11-27 22:40:49,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:41:20] 2025-11-27 22:40:49,861 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:41:20] 2025-11-27 22:40:49,861 | INFO     | update_server=False
[2025-11-27 23:41:20] 2025-11-27 22:40:49,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:41:20] 2025-11-27 22:40:50,023 | INFO     | all job control threads have been joined
[2025-11-27 23:41:20] 2025-11-27 22:40:50,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:41:20] 2025-11-27 22:40:50,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:41:20] 2025-11-27 22:40:50,277 | INFO     | aborting loop
[2025-11-27 23:41:20] 2025-11-27 22:40:50,719 | INFO     | all payload control threads have been joined
[2025-11-27 23:41:20] 2025-11-27 22:40:50,823 | INFO     | all data control threads have been joined
[2025-11-27 23:41:20] 2025-11-27 22:40:50,867 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,029 | INFO     | [job] control thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,135 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,222 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:41:20] 2025-11-27 22:40:51,283 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:41:20] 2025-11-27 22:40:51,725 | INFO     | [payload] control thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,738 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,761 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,828 | INFO     | [data] control thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,878 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:51,983 | INFO     | [job] validate thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:52,118 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:52,129 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:52,291 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:52,434 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:40:53,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:41:20] 2025-11-27 22:40:57,229 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:41:00,175 | INFO     | job.realtimelogging is not enabled
[2025-11-27 23:41:20] 2025-11-27 22:41:01,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:41:20] 2025-11-27 22:41:01,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736541816640)>', '<ExcThread(monitor, started 139736022775552)>']
[2025-11-27 23:41:20] 2025-11-27 22:41:06,630 | INFO     | all workflow threads have been joined
[2025-11-27 23:41:20] 2025-11-27 22:41:06,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:41:20] 2025-11-27 22:41:06,630 | INFO     | traces error code: 0
[2025-11-27 23:41:20] 2025-11-27 22:41:06,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:41:20] 2025-11-27 22:41:18,413 | INFO     | 84031s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 23:41:20] 2025-11-27 22:41:19,573 | INFO     | PID=22947 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | INFO     | .. there are 9 such processes running
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:41:20] 2025-11-27 22:41:19,574 | INFO     | [monitor] control thread has ended
[2025-11-27 23:41:20] 2025-11-27 22:41:19,769 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:41:20] 2025-11-27 22:41:19,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:41:20] 2025-11-27 22:41:19,776 [wrapper] pilotpid: 22947
[2025-11-27 23:41:20] 2025-11-27 22:41:19,778 [wrapper] Pilot exit status: 0
[2025-11-27 23:41:20] 2025-11-27 22:41:20,120 [wrapper] pandaids: 6895372678
[2025-11-27 23:41:20] 2025-11-27 22:41:20,157 [wrapper] cleanup supervisor_pilot 32728 22948
[2025-11-27 23:41:20] 2025-11-27 22:41:20,208 [wrapper] Test setup, not cleaning
[2025-11-27 23:41:20] 2025-11-27 22:41:20,210 [wrapper] apfmon messages muted
[2025-11-27 23:41:20] 2025-11-27 22:41:20,213 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:41:20] 2025-11-27 22:41:20,216 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:41:20]  *** Error codes and diagnostics ***
[2025-11-27 23:41:20]     "exeErrorCode": 0,
[2025-11-27 23:41:20]     "exeErrorDiag": "",
[2025-11-27 23:41:20]     "pilotErrorCode": 0,
[2025-11-27 23:41:20]     "pilotErrorDiag": "",
[2025-11-27 23:41:20]  *** Listing of results directory ***
[2025-11-27 23:41:20] total 1328636
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc    576529 Nov 23 22:55 pilot3.tar.gz
[2025-11-27 23:41:20] -rwx------. 1 boinc boinc     36292 Nov 23 23:06 runpilot2-wrapper.sh
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc      5112 Nov 23 23:06 queuedata.json
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc       100 Nov 27 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:41:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 00:16 run_atlas
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc       105 Nov 27 00:16 job.xml
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc 412098492 Nov 27 00:16 EVNT.47483658._000911.pool.root.1
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc    590096 Nov 27 00:16 input.tar.gz
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc      6390 Nov 27 00:16 init_data.xml
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:16 start_atlas.sh
[2025-11-27 23:41:20] drwxrwx--x. 2 boinc boinc        68 Nov 27 00:16 shared
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc         0 Nov 27 00:16 boinc_lockfile
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc      2785 Nov 27 00:16 pandaJob.out
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc    991538 Nov 27 00:20 agis_schedconf.cvmfs.json
[2025-11-27 23:41:20] drwx------. 5 boinc boinc      4096 Nov 27 00:20 pilot3
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:16 boinc_task_state.xml
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc 917257825 Nov 27 23:37 HITS.47556137._008978.pool.root.1
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc      1029 Nov 27 23:38 memory_monitor_summary.json
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc   1516240 Nov 27 23:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc   2450924 Nov 27 23:39 log.47556137._008978.job.log.tgz.1
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc      8641 Nov 27 23:40 heartbeat.json
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc        95 Nov 27 23:40 pilot_heartbeat.json
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:40 wrapper_checkpoint.txt
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:40 boinc_mmap_file
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc       936 Nov 27 23:41 pilotlog.txt
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc  11184294 Nov 27 23:41 log.47556137._008978.job.log.1
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc       353 Nov 27 23:41 output.list
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:41 runtime_log
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc  13649920 Nov 27 23:41 result.tar.gz
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc      8817 Nov 27 23:41 runtime_log.err
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc       662 Nov 27 23:41 7gjKDmRPXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIDLKDmBurDMm.diag
[2025-11-27 23:41:20] -rw-r--r--. 1 boinc boinc     21492 Nov 27 23:41 stderr.txt
[2025-11-27 23:41:20] HITS file was successfully produced:
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc 917257825 Nov 27 23:37 shared/HITS.pool.root.1
[2025-11-27 23:41:20]  *** Contents of shared directory: ***
[2025-11-27 23:41:20] total 1312128
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc 412098492 Nov 27 00:16 ATLAS.root_0
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc    590096 Nov 27 00:16 input.tar.gz
[2025-11-27 23:41:20] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:16 start_atlas.sh
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc 917257825 Nov 27 23:37 HITS.pool.root.1
[2025-11-27 23:41:20] -rw-------. 1 boinc boinc  13649920 Nov 27 23:41 result.tar.gz
23:41:22 (19156): run_atlas exited; CPU time 316458.236778
23:41:22 (19156): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN