Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:21:10 (14296): wrapper (7.7.26015): starting
14:21:10 (14296): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:21:10] Arguments: --nthreads 8
[2025-11-24 14:21:10] Threads: 8
[2025-11-24 14:21:10] Checking for CVMFS
[2025-11-24 14:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:21:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:21:10] 2.11.2.0 6491 6480 80252 153257 2 251 11401348 18432000 1357 130560 0 5799430 99.992 230748 15067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 14:21:10] CVMFS is ok
[2025-11-24 14:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:21:10] Further information can be found at the LHC@home message board.
[2025-11-24 14:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:21:10] Checking for apptainer binary...
[2025-11-24 14:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:21:10] Running /usr/bin/apptainer --version
[2025-11-24 14:21:10] apptainer version 1.3.2-1.el7
[2025-11-24 14:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:21:12] c-206-29.aglt2.org
[2025-11-24 14:21:12] apptainer works
[2025-11-24 14:21:12] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:21:12] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:21:12] Starting ATLAS job with PandaID=6895351772
[2025-11-24 14:21:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:50:28]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:50:28] 2025-11-25 14:49:31,698 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:50:28] 2025-11-25 14:49:31,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:50:28] 2025-11-25 14:49:31,717 | INFO     | fitting pss+swap vs Time
[2025-11-25 09:50:28] 2025-11-25 14:49:31,718 | INFO     | sum of square deviations: 470364516452.97833
[2025-11-25 09:50:28] 2025-11-25 14:49:31,760 | INFO     | sum of deviations: 1937457246474.3672
[2025-11-25 09:50:28] 2025-11-25 14:49:31,761 | INFO     | mean x: 1764047124.6623151
[2025-11-25 09:50:28] 2025-11-25 14:49:31,761 | INFO     | mean y: 2872070.539599652
[2025-11-25 09:50:28] 2025-11-25 14:49:31,761 | INFO     | intersect: -7263334807.846268
[2025-11-25 09:50:28] 2025-11-25 14:49:31,763 | INFO     | chi2: 5.950640108367611
[2025-11-25 09:50:28] 2025-11-25 14:49:31,764 | INFO     | sum of square deviations: 464250847875.77576
[2025-11-25 09:50:28] 2025-11-25 14:49:31,808 | INFO     | sum of deviations: 2285450236934.471
[2025-11-25 09:50:28] 2025-11-25 14:49:31,808 | INFO     | mean x: 1764046972.1652098
[2025-11-25 09:50:28] 2025-11-25 14:49:31,808 | INFO     | mean y: 2880746.1826923075
[2025-11-25 09:50:28] 2025-11-25 14:49:31,809 | INFO     | intersect: -8681307099.559923
[2025-11-25 09:50:28] 2025-11-25 14:49:31,810 | INFO     | chi2: 3.262628391444522
[2025-11-25 09:50:28] 2025-11-25 14:49:31,811 | INFO     | current chi2=3.262628391444522 (change=45.17180787228735 %)
[2025-11-25 09:50:28] 2025-11-25 14:49:31,812 | INFO     | sum of square deviations: 458190389598.5517
[2025-11-25 09:50:28] 2025-11-25 14:49:31,855 | INFO     | sum of deviations: 2477843181895.3936
[2025-11-25 09:50:28] 2025-11-25 14:49:31,855 | INFO     | mean x: 1764046819.66813
[2025-11-25 09:50:28] 2025-11-25 14:49:31,856 | INFO     | mean y: 2885586.762949956
[2025-11-25 09:50:28] 2025-11-25 14:49:31,856 | INFO     | intersect: -9536885399.024538
[2025-11-25 09:50:28] 2025-11-25 14:49:31,857 | INFO     | chi2: 2.376055749236252
[2025-11-25 09:50:28] 2025-11-25 14:49:31,858 | INFO     | current chi2=2.376055749236252 (change=27.173570993653424 %)
[2025-11-25 09:50:28] 2025-11-25 14:49:31,859 | INFO     | sum of square deviations: 452182909058.8123
[2025-11-25 09:50:28] 2025-11-25 14:49:31,898 | INFO     | sum of deviations: 2555938833557.828
[2025-11-25 09:50:28] 2025-11-25 14:49:31,898 | INFO     | mean x: 1764046667.1710758
[2025-11-25 09:50:28] 2025-11-25 14:49:31,898 | INFO     | mean y: 2887566.3668430336
[2025-11-25 09:50:28] 2025-11-25 14:49:31,898 | INFO     | intersect: -9968288456.662338
[2025-11-25 09:50:28] 2025-11-25 14:49:31,899 | INFO     | chi2: 2.1160228250156368
[2025-11-25 09:50:28] 2025-11-25 14:49:31,899 | INFO     | current chi2=2.1160228250156368 (change=10.94388986050513 %)
[2025-11-25 09:50:28] 2025-11-25 14:49:31,899 | INFO     | right removable region: 1133
[2025-11-25 09:50:28] 2025-11-25 14:49:31,900 | INFO     | sum of square deviations: 464250383665.7766
[2025-11-25 09:50:28] 2025-11-25 14:49:31,927 | INFO     | sum of deviations: 1667920282943.2341
[2025-11-25 09:50:28] 2025-11-25 14:49:31,927 | INFO     | mean x: 1764047277.1652098
[2025-11-25 09:50:28] 2025-11-25 14:49:31,927 | INFO     | mean y: 2878783.5384615385
[2025-11-25 09:50:28] 2025-11-25 14:49:31,927 | INFO     | intersect: -6334843999.6329
[2025-11-25 09:50:28] 2025-11-25 14:49:31,929 | INFO     | chi2: 4.055000596792093
[2025-11-25 09:50:28] 2025-11-25 14:49:31,929 | INFO     | current chi2=4.055000596792093 (change=31.856060475072706 %)
[2025-11-25 09:50:28] 2025-11-25 14:49:31,931 | INFO     | sum of square deviations: 458189530718.8881
[2025-11-25 09:50:28] 2025-11-25 14:49:31,974 | INFO     | sum of deviations: 1596770097361.1062
[2025-11-25 09:50:28] 2025-11-25 14:49:31,974 | INFO     | mean x: 1764047429.667252
[2025-11-25 09:50:28] 2025-11-25 14:49:31,975 | INFO     | mean y: 2880573.343283582
[2025-11-25 09:50:28] 2025-11-25 14:49:31,975 | INFO     | intersect: -6144746112.059002
[2025-11-25 09:50:28] 2025-11-25 14:49:31,976 | INFO     | chi2: 4.007312195135194
[2025-11-25 09:50:28] 2025-11-25 14:49:31,977 | INFO     | current chi2=4.007312195135194 (change=1.176039325237709 %)
[2025-11-25 09:50:28] 2025-11-25 14:49:31,977 | INFO     | left removable region: 20
[2025-11-25 09:50:28] 2025-11-25 14:49:31,978 | INFO     | sum of square deviations: 427523518965.91016
[2025-11-25 09:50:28] 2025-11-25 14:49:32,017 | INFO     | sum of deviations: 2104315129444.5002
[2025-11-25 09:50:28] 2025-11-25 14:49:32,017 | INFO     | mean x: 1764047246.6756513
[2025-11-25 09:50:28] 2025-11-25 14:49:32,017 | INFO     | mean y: 2898987.5831087152
[2025-11-25 09:50:28] 2025-11-25 14:49:32,018 | INFO     | intersect: -8679924636.280457
[2025-11-25 09:50:28] 2025-11-25 14:49:32,019 | INFO     | chi2: 0.13567441799331142
[2025-11-25 09:50:28] 2025-11-25 14:49:32,020 | INFO     | current memory leak: 4.92 B/s (using 1113 data points, chi2=0.14)
[2025-11-25 09:50:28] 2025-11-25 14:49:32,021 | INFO     | could have reported an average CPU frequency of 2586 MHz (41 samples)
[2025-11-25 09:50:28] 2025-11-25 14:49:32,021 | INFO     | ..............................
[2025-11-25 09:50:28] 2025-11-25 14:49:32,021 | INFO     | . Timing measurements:
[2025-11-25 09:50:28] 2025-11-25 14:49:32,021 | INFO     | . get job = 0 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . initial setup = 2 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . payload setup = 6 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . stage-in = 0 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . payload execution = 70050 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . stage-out = 4 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,022 | INFO     | . log creation = 0 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,023 | INFO     | ..............................
[2025-11-25 09:50:28] 2025-11-25 14:49:32,182 | INFO     | 
[2025-11-25 09:50:28] 2025-11-25 14:49:32,182 | INFO     | job summary report
[2025-11-25 09:50:28] 2025-11-25 14:49:32,182 | INFO     | --------------------------------------------------
[2025-11-25 09:50:28] 2025-11-25 14:49:32,182 | INFO     | PanDA job id: 6895351772
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | task id: 47556137
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | errors: (none)
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | pilot state: finished 
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | transexitcode: 0
[2025-11-25 09:50:28] 2025-11-25 14:49:32,183 | INFO     | exeerrorcode: 0
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | exeerrordiag: 
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | exitcode: 0
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | exitmsg: OK
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | cpuconsumptiontime: 543637 s
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | nevents: 1000
[2025-11-25 09:50:28] 2025-11-25 14:49:32,184 | INFO     | neventsw: 0
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | pid: 24463
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | pgrp: 24463
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | corecount: 8
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | event service: False
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | sizes: {0: 2284139, 1: 2284338, 5: 2284600, 11: 2284656, 70060: 2341026, 70064: 2350025, 70067: 2350209, 70072: 2350551}
[2025-11-25 09:50:28] 2025-11-25 14:49:32,185 | INFO     | --------------------------------------------------
[2025-11-25 09:50:28] 2025-11-25 14:49:32,186 | INFO     | 
[2025-11-25 09:50:28] 2025-11-25 14:49:32,186 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 09:50:28] 2025-11-25 14:49:32,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:50:28] 2025-11-25 14:49:32,204 | INFO     | job 6895351772 has completed (purged errors)
[2025-11-25 09:50:28] 2025-11-25 14:49:32,205 | INFO     | overall cleanup function is called
[2025-11-25 09:50:28] 2025-11-25 14:49:33,217 | INFO     | --- collectZombieJob: --- 10, [24463]
[2025-11-25 09:50:28] 2025-11-25 14:49:33,218 | INFO     | zombie collector waiting for pid 24463
[2025-11-25 09:50:28] 2025-11-25 14:49:33,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:50:28] 2025-11-25 14:49:33,218 | INFO     | collected zombie processes
[2025-11-25 09:50:28] 2025-11-25 14:49:33,218 | INFO     | will attempt to kill all subprocesses of pid=24463
[2025-11-25 09:50:28] 2025-11-25 14:49:33,374 | INFO     | process IDs to be killed: [24463] (in reverse order)
[2025-11-25 09:50:28] 2025-11-25 14:49:33,425 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:50:28] 2025-11-25 14:49:33,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:50:28] 2025-11-25 14:49:33,431 | INFO     | did not find any defunct processes belonging to 24463
[2025-11-25 09:50:28] 2025-11-25 14:49:33,436 | INFO     | did not find any defunct processes belonging to 24463
[2025-11-25 09:50:28] 2025-11-25 14:49:33,438 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:50:28] 2025-11-25 14:49:33,438 | INFO     | ready for new job
[2025-11-25 09:50:28] 2025-11-25 14:49:33,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:50:28] 2025-11-25 14:49:33,443 | INFO     | ***************************************
[2025-11-25 09:50:28] 2025-11-25 14:49:33,443 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:50:28] 2025-11-25 14:49:33,444 | INFO     | ***************************************
[2025-11-25 09:50:28] 2025-11-25 14:49:33,444 | INFO     | 
[2025-11-25 09:50:28] 2025-11-25 14:49:33,445 | INFO     | architecture information:
[2025-11-25 09:50:28] 2025-11-25 14:49:33,446 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:50:28] 2025-11-25 14:49:33,459 | INFO     | cat /etc/os-release:
[2025-11-25 09:50:28] NAME="CentOS Linux"
[2025-11-25 09:50:28] VERSION="7 (Core)"
[2025-11-25 09:50:28] ID="centos"
[2025-11-25 09:50:28] ID_LIKE="rhel fedora"
[2025-11-25 09:50:28] VERSION_ID="7"
[2025-11-25 09:50:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:50:28] ANSI_COLOR="0;31"
[2025-11-25 09:50:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:50:28] HOME_URL="https://www.centos.org/"
[2025-11-25 09:50:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:50:28] 
[2025-11-25 09:50:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:50:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:50:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:50:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:50:28] 
[2025-11-25 09:50:28] 2025-11-25 14:49:33,459 | INFO     | ***************************************
[2025-11-25 09:50:28] 2025-11-25 14:49:33,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 09:50:28] 2025-11-25 14:49:33,974 | INFO     | sufficient remaining disk space (25023217664 B)
[2025-11-25 09:50:28] 2025-11-25 14:49:33,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:50:28] 2025-11-25 14:49:33,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:50:28] 2025-11-25 14:49:33,975 | INFO     | update_server=False
[2025-11-25 09:50:28] 2025-11-25 14:49:33,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:50:28] 2025-11-25 14:49:33,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:50:28] 2025-11-25 14:49:34,024 | INFO     | all data control threads have been joined
[2025-11-25 09:50:28] 2025-11-25 14:49:34,426 | INFO     | all payload control threads have been joined
[2025-11-25 09:50:28] 2025-11-25 14:49:34,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:50:28] 2025-11-25 14:49:34,519 | INFO     | aborting loop
[2025-11-25 09:50:28] 2025-11-25 14:49:34,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:50:28] 2025-11-25 14:49:34,982 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:34,982 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,030 | INFO     | [data] control thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,242 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,432 | INFO     | [payload] control thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,450 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,514 | INFO     | all job control threads have been joined
[2025-11-25 09:50:28] 2025-11-25 14:49:35,525 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,525 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,526 | INFO     | [job] validate thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,530 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:35,674 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:36,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:36,158 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:36,520 | INFO     | [job] control thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:36,930 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:49:36,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:50:28] 2025-11-25 14:49:40,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:50:28] 2025-11-25 14:50:03,469 | INFO     | PID=18035 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 09:50:28] 2025-11-25 14:50:03,470 | INFO     | .. there are 3 such processes running
[2025-11-25 09:50:28] 2025-11-25 14:50:03,470 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:50:28] 2025-11-25 14:50:03,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:50:28] 2025-11-25 14:50:03,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:50:28] 2025-11-25 14:50:20,865 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:50:28] 2025-11-25 14:50:22,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797583107904)>', '<ExcThread(monitor, started 139796462683904)>']
[2025-11-25 09:50:28] 2025-11-25 14:50:23,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:50:28] 2025-11-25 14:50:23,572 | INFO     | [monitor] control thread has ended
[2025-11-25 09:50:28] 2025-11-25 14:50:27,762 | INFO     | all workflow threads have been joined
[2025-11-25 09:50:28] 2025-11-25 14:50:27,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:50:28] 2025-11-25 14:50:27,763 | INFO     | traces error code: 0
[2025-11-25 09:50:28] 2025-11-25 14:50:27,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:50:28] 2025-11-25 14:50:27,867 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:50:28] 2025-11-25 14:50:27,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:50:28] 2025-11-25 14:50:27,871 [wrapper] pilotpid: 18035
[2025-11-25 09:50:28] 2025-11-25 14:50:27,873 [wrapper] Pilot exit status: 0
[2025-11-25 09:50:28] 2025-11-25 14:50:27,881 [wrapper] pandaids: 6895351772
[2025-11-25 09:50:28] 2025-11-25 14:50:27,916 [wrapper] cleanup supervisor_pilot 18320 18036
[2025-11-25 09:50:28] 2025-11-25 14:50:27,919 [wrapper] Test setup, not cleaning
[2025-11-25 09:50:28] 2025-11-25 14:50:27,921 [wrapper] apfmon messages muted
[2025-11-25 09:50:28] 2025-11-25 14:50:27,923 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:50:28] 2025-11-25 14:50:27,925 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:50:28]  *** Error codes and diagnostics ***
[2025-11-25 09:50:28]     "exeErrorCode": 0,
[2025-11-25 09:50:28]     "exeErrorDiag": "",
[2025-11-25 09:50:28]     "pilotErrorCode": 0,
[2025-11-25 09:50:28]     "pilotErrorDiag": "",
[2025-11-25 09:50:28]  *** Listing of results directory ***
[2025-11-25 09:50:28] total 1306864
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 20:11 pilot3.tar.gz
[2025-11-25 09:50:28] -rwx------ 1 boincer umatlas     36292 Nov 22 20:14 runpilot2-wrapper.sh
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 20:14 queuedata.json
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas       100 Nov 24 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:50:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 14:21 run_atlas
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas       105 Nov 24 14:21 job.xml
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas 408311385 Nov 24 14:21 EVNT.47483658._000565.pool.root.1
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:21 start_atlas.sh
[2025-11-25 09:50:28] drwxrwx--x 2 boincer umatlas      4096 Nov 24 14:21 shared
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 14:21 input.tar.gz
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas         0 Nov 24 14:21 boinc_lockfile
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 14:21 pandaJob.out
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas        57 Nov 24 14:21 setup.sh.local
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas    991801 Nov 24 14:21 agis_schedconf.cvmfs.json
[2025-11-25 09:50:28] drwx------ 5 boincer umatlas      4096 Nov 24 14:21 pilot3
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas       533 Nov 25 09:34 boinc_task_state.xml
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 09:47 init_data.xml
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas 902047365 Nov 25 09:48 HITS.47556137._005602.pool.root.1
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas      1065 Nov 25 09:49 memory_monitor_summary.json
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas   1516240 Nov 25 09:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas   2300496 Nov 25 09:49 log.47556137._005602.job.log.tgz.1
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas      8662 Nov 25 09:49 heartbeat.json
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas        95 Nov 25 09:50 pilot_heartbeat.json
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas        29 Nov 25 09:50 wrapper_checkpoint.txt
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas      4821 Nov 25 09:50 pilotlog.txt
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas   9671174 Nov 25 09:50 log.47556137._005602.job.log.1
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas       353 Nov 25 09:50 output.list
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas       620 Nov 25 09:50 runtime_log
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 09:50 boinc_mmap_file
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas  11991040 Nov 25 09:50 result.tar.gz
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 09:50 runtime_log.err
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas       668 Nov 25 09:50 gUrNDmZrDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8VKKDmyQLj1m.diag
[2025-11-25 09:50:28] -rw-r--r-- 1 boincer umatlas     21091 Nov 25 09:50 stderr.txt
[2025-11-25 09:50:28] HITS file was successfully produced:
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas 902047365 Nov 25 09:48 shared/HITS.pool.root.1
[2025-11-25 09:50:28]  *** Contents of shared directory: ***
[2025-11-25 09:50:28] total 1291968
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas 408311385 Nov 24 14:21 ATLAS.root_0
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:21 start_atlas.sh
[2025-11-25 09:50:28] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 14:21 input.tar.gz
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas 902047365 Nov 25 09:48 HITS.pool.root.1
[2025-11-25 09:50:28] -rw------- 1 boincer umatlas  11991040 Nov 25 09:50 result.tar.gz
09:50:29 (14296): run_atlas exited; CPU time 543031.490113
09:50:29 (14296): called boinc_finish(0)

</stderr_txt>
]]>

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