Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:30 (3778980): wrapper (7.7.26015): starting
04:33:30 (3778980): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 04:33:30] Arguments: --nthreads 3
[2025-11-25 04:33:30] Threads: 3
[2025-11-25 04:33:30] Checking for CVMFS
[2025-11-25 04:33:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:33:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:33:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:33:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:33:31] 2.9.2.0 3650771 943 59644 153268 1 81 6791750 36864000 0 130560 0 352103 99.984 31627 21811 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:33:31] CVMFS is ok
[2025-11-25 04:33:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:33:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:33:31] Further information can be found at the LHC@home message board.
[2025-11-25 04:33:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:33:31] Checking for apptainer binary...
[2025-11-25 04:33:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:33:31] Running /usr/bin/apptainer --version
[2025-11-25 04:33:31] apptainer version 1.4.1-1.1
[2025-11-25 04:33:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:33:31] thA330a
[2025-11-25 04:33:31] apptainer works
[2025-11-25 04:33:31] Set ATHENA_PROC_NUMBER=3
[2025-11-25 04:33:31] Set ATHENA_CORE_NUMBER=3
[2025-11-25 04:33:31] Starting ATLAS job with PandaID=6895372524
[2025-11-25 04:33:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:35:35]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:35:35] 2025-11-25 11:35:04,836 | INFO     | architecture information:
[2025-11-25 12:35:35] 2025-11-25 11:35:04,836 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:35:35] 2025-11-25 11:35:04,844 | INFO     | cat /etc/os-release:
[2025-11-25 12:35:35] NAME="CentOS Linux"
[2025-11-25 12:35:35] VERSION="7 (Core)"
[2025-11-25 12:35:35] ID="centos"
[2025-11-25 12:35:35] ID_LIKE="rhel fedora"
[2025-11-25 12:35:35] VERSION_ID="7"
[2025-11-25 12:35:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:35:35] ANSI_COLOR="0;31"
[2025-11-25 12:35:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:35:35] HOME_URL="https://www.centos.org/"
[2025-11-25 12:35:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:35:35] 
[2025-11-25 12:35:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:35:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:35:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:35:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:35:35] 
[2025-11-25 12:35:35] 2025-11-25 11:35:04,844 | INFO     | ***************************************
[2025-11-25 12:35:35] 2025-11-25 11:35:05,348 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | INFO     | sufficient remaining disk space (253873881088 B)
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | INFO     | update_server=False
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:35:35] 2025-11-25 11:35:05,361 | INFO     | aborting loop
[2025-11-25 12:35:35] 2025-11-25 11:35:05,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:35:35] 2025-11-25 11:35:05,411 | INFO     | all job control threads have been joined
[2025-11-25 12:35:35] 2025-11-25 11:35:05,485 | INFO     | all data control threads have been joined
[2025-11-25 12:35:35] 2025-11-25 11:35:06,366 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:35:35] 2025-11-25 11:35:06,366 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,366 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,383 | INFO     | all payload control threads have been joined
[2025-11-25 12:35:35] 2025-11-25 11:35:06,400 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,417 | INFO     | [job] control thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,491 | INFO     | [data] control thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,502 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:06,504 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,004 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,265 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,367 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,389 | INFO     | [payload] control thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,800 | INFO     | [job] validate thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:07,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:10,373 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:35:35] 2025-11-25 11:35:12,189 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:35:35] 2025-11-25 11:35:14,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253308872512)>', '<ExcThread(monitor, started 140252685526784)>']
[2025-11-25 12:35:35] 2025-11-25 11:35:19,192 | INFO     | all workflow threads have been joined
[2025-11-25 12:35:35] 2025-11-25 11:35:19,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:35:35] 2025-11-25 11:35:19,192 | INFO     | traces error code: 0
[2025-11-25 12:35:35] 2025-11-25 11:35:19,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:35:35] 2025-11-25 11:35:34,970 | INFO     | PID=3782698 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 12:35:35] 2025-11-25 11:35:34,971 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:35:35] 2025-11-25 11:35:34,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:35:35] 2025-11-25 11:35:34,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:35:35] 2025-11-25 11:35:34,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:35:35] 2025-11-25 11:35:34,971 | INFO     | [monitor] control thread has ended
[2025-11-25 12:35:35] 2025-11-25 11:35:35,017 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:35:35] 2025-11-25 11:35:35,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:35:35] 2025-11-25 11:35:35,022 [wrapper] pilotpid: 3782698
[2025-11-25 12:35:35] 2025-11-25 11:35:35,024 [wrapper] Pilot exit status: 0
[2025-11-25 12:35:35] 2025-11-25 11:35:35,031 [wrapper] pandaids: 6895372524
[2025-11-25 12:35:35] 2025-11-25 11:35:35,048 [wrapper] cleanup supervisor_pilot 3841114 3782699
[2025-11-25 12:35:35] 2025-11-25 11:35:35,050 [wrapper] Test setup, not cleaning
[2025-11-25 12:35:35] 2025-11-25 11:35:35,053 [wrapper] apfmon messages muted
[2025-11-25 12:35:35] 2025-11-25 11:35:35,055 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:35:35] 2025-11-25 11:35:35,057 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:35:35]  *** Error codes and diagnostics ***
[2025-11-25 12:35:35]     "exeErrorCode": 0,
[2025-11-25 12:35:35]     "exeErrorDiag": "",
[2025-11-25 12:35:35]     "pilotErrorCode": 0,
[2025-11-25 12:35:35]     "pilotErrorDiag": "",
[2025-11-25 12:35:35]  *** Listing of results directory ***
[2025-11-25 12:35:35] total 1324400
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc    576529 Nov 23 22:23 pilot3.tar.gz
[2025-11-25 12:35:35] -rwx------ 1 boinc boinc     36292 Nov 23 22:50 runpilot2-wrapper.sh
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      5112 Nov 23 22:50 queuedata.json
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:35:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:33 run_atlas
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:33 job.xml
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc 409131222 Nov 25 04:33 EVNT.47483658._000905.pool.root.1
[2025-11-25 12:35:35] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:33 shared
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc    590097 Nov 25 04:33 input.tar.gz
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:33 start_atlas.sh
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:33 boinc_setup_complete
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      6441 Nov 25 04:33 init_data.xml
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:33 boinc_lockfile
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      2785 Nov 25 04:33 pandaJob.out
[2025-11-25 12:35:35] -rw------- 1 boinc boinc    991801 Nov 25 04:33 agis_schedconf.cvmfs.json
[2025-11-25 12:35:35] drwx------ 5 boinc boinc      4096 Nov 25 04:33 pilot3
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc       531 Nov 25 12:28 boinc_task_state.xml
[2025-11-25 12:35:35] -rw------- 1 boinc boinc 932686708 Nov 25 12:34 HITS.47556137._008912.pool.root.1
[2025-11-25 12:35:35] -rw------- 1 boinc boinc      1030 Nov 25 12:34 memory_monitor_summary.json
[2025-11-25 12:35:35] -rw------- 1 boinc boinc   1516240 Nov 25 12:34 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:35:35] -rw------- 1 boinc boinc   1166847 Nov 25 12:34 log.47556137._008912.job.log.tgz.1
[2025-11-25 12:35:35] -rw------- 1 boinc boinc      8567 Nov 25 12:35 heartbeat.json
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:35 wrapper_checkpoint.txt
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:35 boinc_mmap_file
[2025-11-25 12:35:35] -rw------- 1 boinc boinc       747 Nov 25 12:35 pilotlog.txt
[2025-11-25 12:35:35] -rw------- 1 boinc boinc        95 Nov 25 12:35 pilot_heartbeat.json
[2025-11-25 12:35:35] -rw------- 1 boinc boinc   4065024 Nov 25 12:35 log.47556137._008912.job.log.1
[2025-11-25 12:35:35] -rw------- 1 boinc boinc       353 Nov 25 12:35 output.list
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:35 runtime_log
[2025-11-25 12:35:35] -rw------- 1 boinc boinc   5253120 Nov 25 12:35 result.tar.gz
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      8903 Nov 25 12:35 runtime_log.err
[2025-11-25 12:35:35] -rw------- 1 boinc boinc       666 Nov 25 12:35 RW5NDmQ9Wh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEmIKDm1s0v5n.diag
[2025-11-25 12:35:35] -rw-r--r-- 1 boinc boinc      8968 Nov 25 12:35 stderr.txt
[2025-11-25 12:35:35] HITS file was successfully produced:
[2025-11-25 12:35:35] -rw------- 1 boinc boinc 932686708 Nov 25 12:34 shared/HITS.pool.root.1
[2025-11-25 12:35:35]  *** Contents of shared directory: ***
[2025-11-25 12:35:35] total 1316108
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc 409131222 Nov 25 04:33 ATLAS.root_0
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc    590097 Nov 25 04:33 input.tar.gz
[2025-11-25 12:35:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:33 start_atlas.sh
[2025-11-25 12:35:35] -rw------- 1 boinc boinc 932686708 Nov 25 12:34 HITS.pool.root.1
[2025-11-25 12:35:35] -rw------- 1 boinc boinc   5253120 Nov 25 12:35 result.tar.gz
12:35:36 (3778980): run_atlas exited; CPU time 84652.579258
12:35:36 (3778980): called boinc_finish(0)

</stderr_txt>
]]>

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