Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:11:04 (24947): wrapper (7.7.26015): starting
14:11:04 (24947): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:11:04] Arguments: --nthreads 8
[2025-11-24 14:11:04] Threads: 8
[2025-11-24 14:11:04] Checking for CVMFS
[2025-11-24 14:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:11:05] 2.11.2.0 5808 167894 107520 153256 1 81 13304562 18432000 2827 130560 0 110575205 99.948 8461629 6605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-24 14:11:05] CVMFS is ok
[2025-11-24 14:11:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:11:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:11:05] Further information can be found at the LHC@home message board.
[2025-11-24 14:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:11:05] Checking for apptainer binary...
[2025-11-24 14:11:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:11:05] Running /usr/bin/apptainer --version
[2025-11-24 14:11:05] apptainer version 1.3.2-1.el7
[2025-11-24 14:11:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:11:06] c-9-34.aglt2.org
[2025-11-24 14:11:06] apptainer works
[2025-11-24 14:11:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:11:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:11:06] Starting ATLAS job with PandaID=6894053153
[2025-11-24 14:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:22:11]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:22:11] 2025-11-25 00:21:39,566 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 19:22:11] 2025-11-25 00:21:39,570 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.906968750001
[2025-11-24 19:22:11] 2025-11-25 00:21:39,573 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894053153/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,574 | INFO     | extracted standard info from prmon json
[2025-11-24 19:22:11] 2025-11-25 00:21:39,574 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:22:11] 2025-11-25 00:21:39,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:22:11] 2025-11-25 00:21:39,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 19:22:11] 2025-11-25 00:21:39,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:22:11] 2025-11-25 00:21:39,578 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:22:11] 2025-11-25 00:21:39,579 | INFO     | sum of square deviations: 8797783560.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,580 | INFO     | sum of deviations: 37853823645.999985
[2025-11-24 19:22:11] 2025-11-25 00:21:39,580 | INFO     | mean x: 1764020777.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,581 | INFO     | mean y: 2538630.8590163933
[2025-11-24 19:22:11] 2025-11-25 00:21:39,581 | INFO     | intersect: -7587433428.016897
[2025-11-24 19:22:11] 2025-11-25 00:21:39,581 | INFO     | chi2: 2.3187877757744366
[2025-11-24 19:22:11] 2025-11-25 00:21:39,581 | INFO     | sum of square deviations: 8372156975.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,583 | INFO     | sum of deviations: 59034926571.50001
[2025-11-24 19:22:11] 2025-11-25 00:21:39,583 | INFO     | mean x: 1764020624.5
[2025-11-24 19:22:11] 2025-11-25 00:21:39,583 | INFO     | mean y: 2546116.6633333336
[2025-11-24 19:22:11] 2025-11-25 00:21:39,583 | INFO     | intersect: -12436163328.099447
[2025-11-24 19:22:11] 2025-11-25 00:21:39,584 | INFO     | chi2: 1.4604987550604156
[2025-11-24 19:22:11] 2025-11-25 00:21:39,584 | INFO     | current chi2=1.4604987550604156 (change=37.01455690257668 %)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,584 | INFO     | sum of square deviations: 7960484140.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | sum of deviations: 57931295265.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | mean x: 1764020472.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | mean y: 2545707.8033898305
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | intersect: -12834863301.460293
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | chi2: 1.4606676155658331
[2025-11-24 19:22:11] 2025-11-25 00:21:39,586 | INFO     | current chi2=1.4606676155658331 (change=-0.011561838367369844 %)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,587 | INFO     | right removable region: 294
[2025-11-24 19:22:11] 2025-11-25 00:21:39,587 | INFO     | sum of square deviations: 8372156975.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | sum of deviations: -7658727052.5
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | mean x: 1764020929.5
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | mean y: 2554811.63
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | intersect: 1616255421.195774
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | chi2: 0.9710401760186469
[2025-11-24 19:22:11] 2025-11-25 00:21:39,589 | INFO     | current chi2=0.9710401760186469 (change=58.12293879743542 %)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,590 | INFO     | sum of square deviations: 7960484140.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,591 | INFO     | sum of deviations: -21248276461.000004
[2025-11-24 19:22:11] 2025-11-25 00:21:39,591 | INFO     | mean x: 1764021082.0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,591 | INFO     | mean y: 2559821.9694915256
[2025-11-24 19:22:11] 2025-11-25 00:21:39,592 | INFO     | intersect: 4711118619.92325
[2025-11-24 19:22:11] 2025-11-25 00:21:39,592 | INFO     | chi2: 0.8798735012833677
[2025-11-24 19:22:11] 2025-11-25 00:21:39,592 | INFO     | current chi2=0.8798735012833677 (change=9.388558474384741 %)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,592 | INFO     | left removable region: 20
[2025-11-24 19:22:11] 2025-11-25 00:21:39,592 | INFO     | sum of square deviations: 6378584712.5
[2025-11-24 19:22:11] 2025-11-25 00:21:39,594 | INFO     | sum of deviations: -3559574846.0000005
[2025-11-24 19:22:11] 2025-11-25 00:21:39,594 | INFO     | mean x: 1764021051.5
[2025-11-24 19:22:11] 2025-11-25 00:21:39,594 | INFO     | mean y: 2569402.109489051
[2025-11-24 19:22:11] 2025-11-25 00:21:39,594 | INFO     | intersect: 986982911.6500463
[2025-11-24 19:22:11] 2025-11-25 00:21:39,594 | INFO     | chi2: 0.003651937427041063
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | current memory leak: -0.56 B/s (using 274 data points, chi2=0.00)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | could have reported an average CPU frequency of 2999 MHz (14 samples)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | ..............................
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | . Timing measurements:
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | . get job = 0 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | . initial setup = 2 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | . payload setup = 5 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,595 | INFO     | . stage-in = 0 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,596 | INFO     | . payload execution = 18587 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,596 | INFO     | . stage-out = 2 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,596 | INFO     | . log creation = 0 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,596 | INFO     | ..............................
[2025-11-24 19:22:11] 2025-11-25 00:21:39,673 | INFO     | 
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | job summary report
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | --------------------------------------------------
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | PanDA job id: 6894053153
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | task id: 47523618
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | errors: (none)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | pilot state: finished 
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | transexitcode: 0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | exeerrorcode: 0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | exeerrordiag: 
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | exitcode: 0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | exitmsg: OK
[2025-11-24 19:22:11] 2025-11-25 00:21:39,675 | INFO     | cpuconsumptiontime: 141692 s
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | nevents: 400
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | neventsw: 0
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | pid: 35607
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | pgrp: 35607
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | corecount: 8
[2025-11-24 19:22:11] 2025-11-25 00:21:39,676 | INFO     | event service: False
[2025-11-24 19:22:11] 2025-11-25 00:21:39,677 | INFO     | sizes: {0: 2283940, 1: 2283940, 4: 2284230, 11: 2284258, 18596: 2316643, 18600: 2325641, 18603: 2325825, 18607: 2326019}
[2025-11-24 19:22:11] 2025-11-25 00:21:39,677 | INFO     | --------------------------------------------------
[2025-11-24 19:22:11] 2025-11-25 00:21:39,677 | INFO     | 
[2025-11-24 19:22:11] 2025-11-25 00:21:39,677 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-24 19:22:11] 2025-11-25 00:21:39,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:22:11] 2025-11-25 00:21:39,700 | INFO     | job 6894053153 has completed (purged errors)
[2025-11-24 19:22:11] 2025-11-25 00:21:39,700 | INFO     | overall cleanup function is called
[2025-11-24 19:22:11] 2025-11-25 00:21:40,709 | INFO     | --- collectZombieJob: --- 10, [35607]
[2025-11-24 19:22:11] 2025-11-25 00:21:40,709 | INFO     | zombie collector waiting for pid 35607
[2025-11-24 19:22:11] 2025-11-25 00:21:40,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:22:11] 2025-11-25 00:21:40,710 | INFO     | collected zombie processes
[2025-11-24 19:22:11] 2025-11-25 00:21:40,710 | INFO     | will attempt to kill all subprocesses of pid=35607
[2025-11-24 19:22:11] 2025-11-25 00:21:40,980 | INFO     | process IDs to be killed: [35607] (in reverse order)
[2025-11-24 19:22:11] 2025-11-25 00:21:41,063 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:22:11] 2025-11-25 00:21:41,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:22:11] 2025-11-25 00:21:41,069 | INFO     | did not find any defunct processes belonging to 35607
[2025-11-24 19:22:11] 2025-11-25 00:21:41,073 | INFO     | did not find any defunct processes belonging to 35607
[2025-11-24 19:22:11] 2025-11-25 00:21:41,074 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:22:11] 2025-11-25 00:21:41,075 | INFO     | ready for new job
[2025-11-24 19:22:11] 2025-11-25 00:21:41,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:22:11] 2025-11-25 00:21:41,077 | INFO     | ***************************************
[2025-11-24 19:22:11] 2025-11-25 00:21:41,077 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:22:11] 2025-11-25 00:21:41,077 | INFO     | ***************************************
[2025-11-24 19:22:11] 2025-11-25 00:21:41,078 | INFO     | 
[2025-11-24 19:22:11] 2025-11-25 00:21:41,079 | INFO     | architecture information:
[2025-11-24 19:22:11] 2025-11-25 00:21:41,080 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:22:11] 2025-11-25 00:21:41,096 | INFO     | cat /etc/os-release:
[2025-11-24 19:22:11] NAME="CentOS Linux"
[2025-11-24 19:22:11] VERSION="7 (Core)"
[2025-11-24 19:22:11] ID="centos"
[2025-11-24 19:22:11] ID_LIKE="rhel fedora"
[2025-11-24 19:22:11] VERSION_ID="7"
[2025-11-24 19:22:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:22:11] ANSI_COLOR="0;31"
[2025-11-24 19:22:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:22:11] HOME_URL="https://www.centos.org/"
[2025-11-24 19:22:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:22:11] 
[2025-11-24 19:22:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:22:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:22:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:22:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:22:11] 
[2025-11-24 19:22:11] 2025-11-25 00:21:41,096 | INFO     | ***************************************
[2025-11-24 19:22:11] 2025-11-25 00:21:41,599 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-24 19:22:11] 2025-11-25 00:21:41,614 | INFO     | sufficient remaining disk space (103339261952 B)
[2025-11-24 19:22:11] 2025-11-25 00:21:41,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:22:11] 2025-11-25 00:21:41,615 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:22:11] 2025-11-25 00:21:41,615 | INFO     | update_server=False
[2025-11-24 19:22:11] 2025-11-25 00:21:41,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:22:11] 2025-11-25 00:21:41,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:22:11] 2025-11-25 00:21:41,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:22:11] 2025-11-25 00:21:41,623 | INFO     | all data control threads have been joined
[2025-11-24 19:22:11] 2025-11-25 00:21:41,982 | INFO     | all payload control threads have been joined
[2025-11-24 19:22:11] 2025-11-25 00:21:42,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:22:11] 2025-11-25 00:21:42,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:22:11] 2025-11-25 00:21:42,252 | INFO     | aborting loop
[2025-11-24 19:22:11] 2025-11-25 00:21:42,621 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:42,622 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:42,628 | INFO     | [data] control thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:42,657 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:42,904 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:42,990 | INFO     | [payload] control thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:43,075 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:43,171 | INFO     | all job control threads have been joined
[2025-11-24 19:22:11] 2025-11-25 00:21:43,257 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:43,439 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:43,621 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:43,628 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:44,023 | INFO     | [job] validate thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:44,054 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:44,176 | INFO     | [job] control thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:46,008 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:47,953 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:22:11] 2025-11-25 00:21:52,473 | INFO     | job.realtimelogging is not enabled
[2025-11-24 19:22:11] 2025-11-25 00:21:53,479 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:22:11] 2025-11-25 00:21:53,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105357711168)>', '<ExcThread(monitor, started 140104777590528)>']
[2025-11-24 19:22:11] 2025-11-25 00:21:58,946 | INFO     | all workflow threads have been joined
[2025-11-24 19:22:11] 2025-11-25 00:21:58,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:22:11] 2025-11-25 00:21:58,947 | INFO     | traces error code: 0
[2025-11-24 19:22:11] 2025-11-25 00:21:58,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:22:11] 2025-11-25 00:22:11,408 | INFO     | PID=29001 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 19:22:11] 2025-11-25 00:22:11,408 | INFO     | .. there are 4 such processes running
[2025-11-24 19:22:11] 2025-11-25 00:22:11,409 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:22:11] 2025-11-25 00:22:11,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:22:11] 2025-11-25 00:22:11,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:22:11] 2025-11-25 00:22:11,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:22:11] 2025-11-25 00:22:11,409 | INFO     | [monitor] control thread has ended
[2025-11-24 19:22:11] 2025-11-25 00:22:11,522 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:22:11] 2025-11-25 00:22:11,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:22:11] 2025-11-25 00:22:11,526 [wrapper] pilotpid: 29001
[2025-11-24 19:22:11] 2025-11-25 00:22:11,528 [wrapper] Pilot exit status: 0
[2025-11-24 19:22:11] 2025-11-25 00:22:11,536 [wrapper] pandaids: 6894053153
[2025-11-24 19:22:11] 2025-11-25 00:22:11,599 [wrapper] cleanup supervisor_pilot  8326 29002
[2025-11-24 19:22:11] 2025-11-25 00:22:11,602 [wrapper] Test setup, not cleaning
[2025-11-24 19:22:11] 2025-11-25 00:22:11,604 [wrapper] apfmon messages muted
[2025-11-24 19:22:11] 2025-11-25 00:22:11,606 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:22:11] 2025-11-25 00:22:11,608 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:22:11]  *** Error codes and diagnostics ***
[2025-11-24 19:22:11]     "exeErrorCode": 0,
[2025-11-24 19:22:11]     "exeErrorDiag": "",
[2025-11-24 19:22:11]     "pilotErrorCode": 0,
[2025-11-24 19:22:11]     "pilotErrorDiag": "",
[2025-11-24 19:22:11]  *** Listing of results directory ***
[2025-11-24 19:22:11] total 599516
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 16:23 pilot3.tar.gz
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 16:29 queuedata.json
[2025-11-24 19:22:11] -rwx------ 1 boincer umatlas     36292 Nov 23 16:31 runpilot2-wrapper.sh
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas       100 Nov 24 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:22:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 14:11 run_atlas
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas       105 Nov 24 14:11 job.xml
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas 306029121 Nov 24 14:11 EVNT.47523616._000004.pool.root.1
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:11 start_atlas.sh
[2025-11-24 19:22:11] drwxrwx--x 2 boincer umatlas      4096 Nov 24 14:11 shared
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas    589958 Nov 24 14:11 input.tar.gz
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas         0 Nov 24 14:11 boinc_lockfile
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas      2610 Nov 24 14:11 pandaJob.out
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas        57 Nov 24 14:11 setup.sh.local
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas    991801 Nov 24 14:11 agis_schedconf.cvmfs.json
[2025-11-24 19:22:11] drwx------ 5 boincer umatlas      4096 Nov 24 14:11 pilot3
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas      6038 Nov 24 19:19 init_data.xml
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas 297751145 Nov 24 19:20 HITS.47523618._000099.pool.root.1
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas       531 Nov 24 19:20 boinc_task_state.xml
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas        95 Nov 24 19:21 pilot_heartbeat.json
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas      1052 Nov 24 19:21 memory_monitor_summary.json
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas   1516227 Nov 24 19:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas    541248 Nov 24 19:21 log.47523618._000099.job.log.tgz.1
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas      7832 Nov 24 19:21 heartbeat.json
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 19:22 boinc_mmap_file
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas        29 Nov 24 19:22 wrapper_checkpoint.txt
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas       820 Nov 24 19:22 pilotlog.txt
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas   2561033 Nov 24 19:22 log.47523618._000099.job.log.1
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas       357 Nov 24 19:22 output.list
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas       620 Nov 24 19:22 runtime_log
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas   3123200 Nov 24 19:22 result.tar.gz
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas      9333 Nov 24 19:22 runtime_log.err
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas       661 Nov 24 19:22 7ZBMDmqqWh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBCLKDm3ToNYo.diag
[2025-11-24 19:22:11] -rw-r--r-- 1 boincer umatlas     21149 Nov 24 19:22 stderr.txt
[2025-11-24 19:22:11] HITS file was successfully produced:
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas 297751145 Nov 24 19:20 shared/HITS.pool.root.1
[2025-11-24 19:22:11]  *** Contents of shared directory: ***
[2025-11-24 19:22:11] total 593288
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas 306029121 Nov 24 14:11 ATLAS.root_0
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 14:11 start_atlas.sh
[2025-11-24 19:22:11] -rw-r--r-- 2 boincer umatlas    589958 Nov 24 14:11 input.tar.gz
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas 297751145 Nov 24 19:20 HITS.pool.root.1
[2025-11-24 19:22:11] -rw------- 1 boincer umatlas   3123200 Nov 24 19:22 result.tar.gz
19:22:13 (24947): run_atlas exited; CPU time 142309.140757
19:22:13 (24947): called boinc_finish(0)

</stderr_txt>
]]>

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