Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:42:59 (34917): wrapper (7.7.26015): starting
13:42:59 (34917): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 13:42:59] Arguments: --nthreads 8
[2025-11-24 13:42:59] Threads: 8
[2025-11-24 13:42:59] Checking for CVMFS
[2025-11-24 13:43:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:43:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:43:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:43:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:43:00] 2.11.2.0 27562 331562 279884 153255 1 81 14525040 18432000 2827 130560 7 673803000 99.310 1127039722 26038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-24 13:43:00] CVMFS is ok
[2025-11-24 13:43:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:43:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:43:00] Further information can be found at the LHC@home message board.
[2025-11-24 13:43:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:43:00] Checking for apptainer binary...
[2025-11-24 13:43:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:43:00] Running /usr/bin/apptainer --version
[2025-11-24 13:43:00] apptainer version 1.3.2-1.el7
[2025-11-24 13:43:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:43:01] c-9-30.aglt2.org
[2025-11-24 13:43:01] apptainer works
[2025-11-24 13:43:01] Set ATHENA_PROC_NUMBER=8
[2025-11-24 13:43:01] Set ATHENA_CORE_NUMBER=8
[2025-11-24 13:43:01] Starting ATLAS job with PandaID=6895351338
[2025-11-24 13:43:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:12:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:12:03] 2025-11-25 12:11:09,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:12:03] 2025-11-25 12:11:09,193 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:12:03] 2025-11-25 12:11:09,194 | INFO     | sum of square deviations: 339822020314.8751
[2025-11-25 07:12:03] 2025-11-25 12:11:09,210 | INFO     | sum of deviations: 1619098136897.7996
[2025-11-25 07:12:03] 2025-11-25 12:11:09,210 | INFO     | mean x: 1764041234.6353056
[2025-11-25 07:12:03] 2025-11-25 12:11:09,211 | INFO     | mean y: 2859380.148399612
[2025-11-25 07:12:03] 2025-11-25 12:11:09,211 | INFO     | intersect: -8401998768.1329775
[2025-11-25 07:12:03] 2025-11-25 12:11:09,211 | INFO     | chi2: 6.069407180132422
[2025-11-25 07:12:03] 2025-11-25 12:11:09,212 | INFO     | sum of square deviations: 334902062720.3471
[2025-11-25 07:12:03] 2025-11-25 12:11:09,230 | INFO     | sum of deviations: 1938258158584.5105
[2025-11-25 07:12:03] 2025-11-25 12:11:09,230 | INFO     | mean x: 1764041082.1384015
[2025-11-25 07:12:03] 2025-11-25 12:11:09,230 | INFO     | mean y: 2869266.799220273
[2025-11-25 07:12:03] 2025-11-25 12:11:09,230 | INFO     | intersect: -10206584182.84438
[2025-11-25 07:12:03] 2025-11-25 12:11:09,231 | INFO     | chi2: 3.2274031702050343
[2025-11-25 07:12:03] 2025-11-25 12:11:09,231 | INFO     | current chi2=3.2274031702050343 (change=46.82506751615536 %)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,232 | INFO     | sum of square deviations: 330029826950.79895
[2025-11-25 07:12:03] 2025-11-25 12:11:09,241 | INFO     | time since job start (62877s) is within the limit (172800.0s)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,248 | INFO     | sum of deviations: 2109888063418.1868
[2025-11-25 07:12:03] 2025-11-25 12:11:09,248 | INFO     | mean x: 1764040929.641528
[2025-11-25 07:12:03] 2025-11-25 12:11:09,248 | INFO     | mean y: 2874638.0333006857
[2025-11-25 07:12:03] 2025-11-25 12:11:09,248 | INFO     | intersect: -11274678470.482098
[2025-11-25 07:12:03] 2025-11-25 12:11:09,249 | INFO     | chi2: 2.330539408108141
[2025-11-25 07:12:03] 2025-11-25 12:11:09,249 | INFO     | current chi2=2.330539408108141 (change=27.789021538326008 %)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,250 | INFO     | sum of square deviations: 325205018407.0197
[2025-11-25 07:12:03] 2025-11-25 12:11:09,265 | INFO     | sum of deviations: 2185073822623.9238
[2025-11-25 07:12:03] 2025-11-25 12:11:09,266 | INFO     | mean x: 1764040777.1437008
[2025-11-25 07:12:03] 2025-11-25 12:11:09,266 | INFO     | mean y: 2877010.253937008
[2025-11-25 07:12:03] 2025-11-25 12:11:09,266 | INFO     | intersect: -11849828532.418776
[2025-11-25 07:12:03] 2025-11-25 12:11:09,267 | INFO     | chi2: 2.0229594070311583
[2025-11-25 07:12:03] 2025-11-25 12:11:09,267 | INFO     | current chi2=2.0229594070311583 (change=13.197803049666796 %)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,268 | INFO     | right removable region: 1015
[2025-11-25 07:12:03] 2025-11-25 12:11:09,269 | INFO     | sum of square deviations: 334901725817.62274
[2025-11-25 07:12:03] 2025-11-25 12:11:09,291 | INFO     | sum of deviations: 1385448830954.8154
[2025-11-25 07:12:03] 2025-11-25 12:11:09,292 | INFO     | mean x: 1764041387.1374269
[2025-11-25 07:12:03] 2025-11-25 12:11:09,292 | INFO     | mean y: 2866610.2495126706
[2025-11-25 07:12:03] 2025-11-25 12:11:09,292 | INFO     | intersect: -7294763975.555175
[2025-11-25 07:12:03] 2025-11-25 12:11:09,293 | INFO     | chi2: 4.321350316263263
[2025-11-25 07:12:03] 2025-11-25 12:11:09,293 | INFO     | current chi2=4.321350316263263 (change=28.80111371652972 %)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,294 | INFO     | sum of square deviations: 330029278683.9161
[2025-11-25 07:12:03] 2025-11-25 12:11:09,312 | INFO     | sum of deviations: 1321461197034.931
[2025-11-25 07:12:03] 2025-11-25 12:11:09,312 | INFO     | mean x: 1764041539.6376102
[2025-11-25 07:12:03] 2025-11-25 12:11:09,312 | INFO     | mean y: 2868612.413320274
[2025-11-25 07:12:03] 2025-11-25 12:11:09,312 | INFO     | intersect: -7060481808.751798
[2025-11-25 07:12:03] 2025-11-25 12:11:09,313 | INFO     | chi2: 4.275198810471712
[2025-11-25 07:12:03] 2025-11-25 12:11:09,313 | INFO     | current chi2=4.275198810471712 (change=1.0679880688650047 %)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,313 | INFO     | left removable region: 20
[2025-11-25 07:12:03] 2025-11-25 12:11:09,314 | INFO     | sum of square deviations: 305453254268.8845
[2025-11-25 07:12:03] 2025-11-25 12:11:09,329 | INFO     | sum of deviations: 1801484968435.2092
[2025-11-25 07:12:03] 2025-11-25 12:11:09,329 | INFO     | mean x: 1764041356.6482413
[2025-11-25 07:12:03] 2025-11-25 12:11:09,329 | INFO     | mean y: 2889078.7206030153
[2025-11-25 07:12:03] 2025-11-25 12:11:09,329 | INFO     | intersect: -10400974501.997456
[2025-11-25 07:12:03] 2025-11-25 12:11:09,330 | INFO     | chi2: 0.20907592416777143
[2025-11-25 07:12:03] 2025-11-25 12:11:09,330 | INFO     | current memory leak: 5.90 B/s (using 995 data points, chi2=0.21)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,331 | INFO     | could have reported an average CPU frequency of 2999 MHz (38 samples)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,331 | INFO     | ..............................
[2025-11-25 07:12:03] 2025-11-25 12:11:09,331 | INFO     | . Timing measurements:
[2025-11-25 07:12:03] 2025-11-25 12:11:09,331 | INFO     | . get job = 0 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,331 | INFO     | . initial setup = 2 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | . payload setup = 4 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | . stage-in = 0 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | . payload execution = 62840 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | . stage-out = 4 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | . log creation = 0 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,332 | INFO     | ..............................
[2025-11-25 07:12:03] 2025-11-25 12:11:09,403 | INFO     | 
[2025-11-25 07:12:03] 2025-11-25 12:11:09,403 | INFO     | job summary report
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | --------------------------------------------------
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | PanDA job id: 6895351338
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | task id: 47556149
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | errors: (none)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | pilot state: finished 
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | transexitcode: 0
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | exeerrorcode: 0
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | exeerrordiag: 
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | exitcode: 0
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | exitmsg: OK
[2025-11-25 07:12:03] 2025-11-25 12:11:09,404 | INFO     | cpuconsumptiontime: 481359 s
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | nevents: 1000
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | neventsw: 0
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | pid: 47608
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | pgrp: 47608
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | corecount: 8
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | event service: False
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | sizes: {0: 2284088, 1: 2284287, 5: 2284549, 12: 2284605, 62849: 2337878, 62854: 2346877, 62856: 2347061, 62862: 2347307}
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | --------------------------------------------------
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | 
[2025-11-25 07:12:03] 2025-11-25 12:11:09,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 07:12:03] 2025-11-25 12:11:09,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:12:03] 2025-11-25 12:11:09,422 | INFO     | job 6895351338 has completed (purged errors)
[2025-11-25 07:12:03] 2025-11-25 12:11:09,423 | INFO     | overall cleanup function is called
[2025-11-25 07:12:03] 2025-11-25 12:11:10,435 | INFO     | --- collectZombieJob: --- 10, [47608]
[2025-11-25 07:12:03] 2025-11-25 12:11:10,435 | INFO     | zombie collector waiting for pid 47608
[2025-11-25 07:12:03] 2025-11-25 12:11:10,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:12:03] 2025-11-25 12:11:10,435 | INFO     | collected zombie processes
[2025-11-25 07:12:03] 2025-11-25 12:11:10,435 | INFO     | will attempt to kill all subprocesses of pid=47608
[2025-11-25 07:12:03] 2025-11-25 12:11:10,759 | INFO     | process IDs to be killed: [47608] (in reverse order)
[2025-11-25 07:12:03] 2025-11-25 12:11:10,859 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:12:03] 2025-11-25 12:11:10,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:12:03] 2025-11-25 12:11:10,865 | INFO     | did not find any defunct processes belonging to 47608
[2025-11-25 07:12:03] 2025-11-25 12:11:10,869 | INFO     | did not find any defunct processes belonging to 47608
[2025-11-25 07:12:03] 2025-11-25 12:11:10,870 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:12:03] 2025-11-25 12:11:10,871 | INFO     | ready for new job
[2025-11-25 07:12:03] 2025-11-25 12:11:10,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:12:03] 2025-11-25 12:11:10,874 | INFO     | ***************************************
[2025-11-25 07:12:03] 2025-11-25 12:11:10,875 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:12:03] 2025-11-25 12:11:10,875 | INFO     | ***************************************
[2025-11-25 07:12:03] 2025-11-25 12:11:10,875 | INFO     | 
[2025-11-25 07:12:03] 2025-11-25 12:11:10,876 | INFO     | architecture information:
[2025-11-25 07:12:03] 2025-11-25 12:11:10,876 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:12:03] 2025-11-25 12:11:10,886 | INFO     | cat /etc/os-release:
[2025-11-25 07:12:03] NAME="CentOS Linux"
[2025-11-25 07:12:03] VERSION="7 (Core)"
[2025-11-25 07:12:03] ID="centos"
[2025-11-25 07:12:03] ID_LIKE="rhel fedora"
[2025-11-25 07:12:03] VERSION_ID="7"
[2025-11-25 07:12:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:12:03] ANSI_COLOR="0;31"
[2025-11-25 07:12:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:12:03] HOME_URL="https://www.centos.org/"
[2025-11-25 07:12:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:12:03] 
[2025-11-25 07:12:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:12:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:12:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:12:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:12:03] 
[2025-11-25 07:12:03] 2025-11-25 12:11:10,887 | INFO     | ***************************************
[2025-11-25 07:12:03] 2025-11-25 12:11:11,389 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 07:12:03] 2025-11-25 12:11:11,406 | INFO     | sufficient remaining disk space (102749962240 B)
[2025-11-25 07:12:03] 2025-11-25 12:11:11,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:12:03] 2025-11-25 12:11:11,406 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:12:03] 2025-11-25 12:11:11,407 | INFO     | update_server=False
[2025-11-25 07:12:03] 2025-11-25 12:11:11,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:12:03] 2025-11-25 12:11:11,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:12:03] 2025-11-25 12:11:11,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:12:03] 2025-11-25 12:11:11,945 | INFO     | all job control threads have been joined
[2025-11-25 07:12:03] 2025-11-25 12:11:12,100 | INFO     | all payload control threads have been joined
[2025-11-25 07:12:03] 2025-11-25 12:11:12,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:12:03] 2025-11-25 12:11:12,400 | INFO     | aborting loop
[2025-11-25 07:12:03] 2025-11-25 12:11:12,408 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,409 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,452 | INFO     | all data control threads have been joined
[2025-11-25 07:12:03] 2025-11-25 12:11:12,632 | INFO     | [job] validate thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,910 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,910 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:12,950 | INFO     | [job] control thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,105 | INFO     | [payload] control thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,252 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,405 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,412 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,458 | INFO     | [data] control thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,592 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,876 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:13,932 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:14,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:12:03] 2025-11-25 12:11:18,126 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:12:03] 2025-11-25 12:11:42,661 | INFO     | PID=39054 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 07:12:03] 2025-11-25 12:11:42,661 | INFO     | .. there are 4 such processes running
[2025-11-25 07:12:03] 2025-11-25 12:11:42,661 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:12:03] 2025-11-25 12:11:42,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:12:03] 2025-11-25 12:11:42,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:12:03] 2025-11-25 12:11:57,226 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:12:03] 2025-11-25 12:11:58,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687750715200)>', '<ExcThread(monitor, started 140687441893120)>']
[2025-11-25 07:12:03] 2025-11-25 12:11:58,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:12:03] 2025-11-25 12:11:58,741 | INFO     | [monitor] control thread has ended
[2025-11-25 07:12:03] 2025-11-25 12:12:03,224 | INFO     | all workflow threads have been joined
[2025-11-25 07:12:03] 2025-11-25 12:12:03,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:12:03] 2025-11-25 12:12:03,225 | INFO     | traces error code: 0
[2025-11-25 07:12:03] 2025-11-25 12:12:03,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:12:03] 2025-11-25 12:12:03,327 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:12:03] 2025-11-25 12:12:03,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:12:03] 2025-11-25 12:12:03,333 [wrapper] pilotpid: 39054
[2025-11-25 07:12:03] 2025-11-25 12:12:03,335 [wrapper] Pilot exit status: 0
[2025-11-25 07:12:03] 2025-11-25 12:12:03,344 [wrapper] pandaids: 6895351338
[2025-11-25 07:12:03] 2025-11-25 12:12:03,417 [wrapper] cleanup supervisor_pilot 11890 39055
[2025-11-25 07:12:03] 2025-11-25 12:12:03,420 [wrapper] Test setup, not cleaning
[2025-11-25 07:12:03] 2025-11-25 12:12:03,431 [wrapper] apfmon messages muted
[2025-11-25 07:12:03] 2025-11-25 12:12:03,434 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:12:03] 2025-11-25 12:12:03,436 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:12:03]  *** Error codes and diagnostics ***
[2025-11-25 07:12:03]     "exeErrorCode": 0,
[2025-11-25 07:12:03]     "exeErrorDiag": "",
[2025-11-25 07:12:03]     "pilotErrorCode": 0,
[2025-11-25 07:12:03]     "pilotErrorDiag": "",
[2025-11-25 07:12:03]  *** Listing of results directory ***
[2025-11-25 07:12:03] total 1324432
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 19:13 pilot3.tar.gz
[2025-11-25 07:12:03] -rwx------ 1 boincer umatlas     36292 Nov 22 19:16 runpilot2-wrapper.sh
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 19:16 queuedata.json
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas       100 Nov 24 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:12:03] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 13:42 run_atlas
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas       105 Nov 24 13:42 job.xml
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas 410725545 Nov 24 13:42 EVNT.47483658._001124.pool.root.1
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 13:42 start_atlas.sh
[2025-11-25 07:12:03] drwxrwx--x 2 boincer umatlas      4096 Nov 24 13:42 shared
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 13:42 input.tar.gz
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas         0 Nov 24 13:42 boinc_lockfile
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 13:43 pandaJob.out
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas        57 Nov 24 13:43 setup.sh.local
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas    991801 Nov 24 13:43 agis_schedconf.cvmfs.json
[2025-11-25 07:12:03] drwx------ 5 boincer umatlas      4096 Nov 24 13:43 pilot3
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas       532 Nov 25 06:57 boinc_task_state.xml
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas      6037 Nov 25 07:01 init_data.xml
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas 919982628 Nov 25 07:10 HITS.47556149._001106.pool.root.1
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas      1061 Nov 25 07:10 memory_monitor_summary.json
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas        95 Nov 25 07:10 pilot_heartbeat.json
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas   1516240 Nov 25 07:10 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas   2224398 Nov 25 07:11 log.47556149._001106.job.log.tgz.1
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas      8642 Nov 25 07:11 heartbeat.json
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 07:12 boinc_mmap_file
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas        29 Nov 25 07:12 wrapper_checkpoint.txt
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas      4822 Nov 25 07:12 pilotlog.txt
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas   8564814 Nov 25 07:12 log.47556149._001106.job.log.1
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas       353 Nov 25 07:12 output.list
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas       620 Nov 25 07:12 runtime_log
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas  10813440 Nov 25 07:12 result.tar.gz
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas      9333 Nov 25 07:12 runtime_log.err
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas       665 Nov 25 07:12 Ac0KDmdxCh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNTKKDmR47SLn.diag
[2025-11-25 07:12:03] -rw-r--r-- 1 boincer umatlas     21121 Nov 25 07:12 stderr.txt
[2025-11-25 07:12:03] HITS file was successfully produced:
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas 919982628 Nov 25 07:10 shared/HITS.pool.root.1
[2025-11-25 07:12:03]  *** Contents of shared directory: ***
[2025-11-25 07:12:03] total 1310688
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas 410725545 Nov 24 13:42 ATLAS.root_0
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 13:42 start_atlas.sh
[2025-11-25 07:12:03] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 13:42 input.tar.gz
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas 919982628 Nov 25 07:10 HITS.pool.root.1
[2025-11-25 07:12:03] -rw------- 1 boincer umatlas  10813440 Nov 25 07:12 result.tar.gz
07:12:04 (34917): run_atlas exited; CPU time 481742.803097
07:12:04 (34917): called boinc_finish(0)

</stderr_txt>
]]>

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