Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:45:39 (2662736): wrapper (7.7.26015): starting
16:45:39 (2662736): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:45:39] Arguments: --nthreads 8
[2025-11-24 16:45:39] Threads: 8
[2025-11-24 16:45:39] Checking for CVMFS
[2025-11-24 16:45:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:45:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:45:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:45:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:45:40] 2.13.3.0 10954 27725 380800 153259 2 157 28237647 32935936 27874 16776704 26 122811663 99.459 183257944 39965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 16:45:40] CVMFS is ok
[2025-11-24 16:45:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:45:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:45:40] Further information can be found at the LHC@home message board.
[2025-11-24 16:45:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:45:40] Checking for apptainer binary...
[2025-11-24 16:45:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:45:40] Running /usr/bin/apptainer --version
[2025-11-24 16:45:40] apptainer version 1.4.4-1.el9
[2025-11-24 16:45:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:45:40] c7-11-13.aglt2.org
[2025-11-24 16:45:40] apptainer works
[2025-11-24 16:45:40] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:45:40] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:45:40] Starting ATLAS job with PandaID=6895371420
[2025-11-24 16:45:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:58:54]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:58:54] 2025-11-25 18:58:00,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:58:54] 2025-11-25 18:58:00,487 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:58:54] 2025-11-25 18:58:00,492 | INFO     | sum of square deviations: 604159664948.4434
[2025-11-25 13:58:54] 2025-11-25 18:58:00,668 | INFO     | sum of deviations: 3409751557317.179
[2025-11-25 13:58:54] 2025-11-25 18:58:00,668 | INFO     | mean x: 1764058956.5380304
[2025-11-25 13:58:54] 2025-11-25 18:58:00,669 | INFO     | mean y: 2945880.3226581267
[2025-11-25 13:58:54] 2025-11-25 18:58:00,669 | INFO     | intersect: -9953036160.895145
[2025-11-25 13:58:54] 2025-11-25 18:58:00,670 | INFO     | chi2: 8.941559205047302
[2025-11-25 13:58:54] 2025-11-25 18:58:00,671 | INFO     | sum of square deviations: 596933306036.5684
[2025-11-25 13:58:54] 2025-11-25 18:58:00,743 | INFO     | sum of deviations: 3798371325723.8164
[2025-11-25 13:58:54] 2025-11-25 18:58:00,743 | INFO     | mean x: 1764058804.044212
[2025-11-25 13:58:54] 2025-11-25 18:58:00,743 | INFO     | mean y: 2954079.439710611
[2025-11-25 13:58:54] 2025-11-25 18:58:00,743 | INFO     | intersect: -11222002394.611856
[2025-11-25 13:58:54] 2025-11-25 18:58:00,745 | INFO     | chi2: 6.294837817489104
[2025-11-25 13:58:54] 2025-11-25 18:58:00,745 | INFO     | current chi2=6.294837817489104 (change=29.6002221409459 %)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,746 | INFO     | sum of square deviations: 589764581272.8922
[2025-11-25 13:58:54] 2025-11-25 18:58:00,777 | INFO     | sum of deviations: 3818227060336.66
[2025-11-25 13:58:54] 2025-11-25 18:58:00,777 | INFO     | mean x: 1764058651.5480225
[2025-11-25 13:58:54] 2025-11-25 18:58:00,777 | INFO     | mean y: 2954499.10653753
[2025-11-25 13:58:54] 2025-11-25 18:58:00,777 | INFO     | intersect: -11417833885.343792
[2025-11-25 13:58:54] 2025-11-25 18:58:00,778 | INFO     | chi2: 6.180317117100179
[2025-11-25 13:58:54] 2025-11-25 18:58:00,778 | INFO     | current chi2=6.180317117100179 (change=1.8192796019422384 %)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,778 | INFO     | right removable region: 1238
[2025-11-25 13:58:54] 2025-11-25 18:58:00,779 | INFO     | sum of square deviations: 596932134226.5684
[2025-11-25 13:58:54] 2025-11-25 18:58:00,805 | INFO     | sum of deviations: 2920791438174.3716
[2025-11-25 13:58:54] 2025-11-25 18:58:00,805 | INFO     | mean x: 1764059109.044212
[2025-11-25 13:58:54] 2025-11-25 18:58:00,805 | INFO     | mean y: 2956196.120578778
[2025-11-25 13:58:54] 2025-11-25 18:58:00,805 | INFO     | intersect: -8628592428.424082
[2025-11-25 13:58:54] 2025-11-25 18:58:00,806 | INFO     | chi2: 5.120278869685224
[2025-11-25 13:58:54] 2025-11-25 18:58:00,806 | INFO     | current chi2=5.120278869685224 (change=42.7361743934442 %)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,808 | INFO     | sum of square deviations: 589762540696.7018
[2025-11-25 13:58:54] 2025-11-25 18:58:00,832 | INFO     | sum of deviations: 2577795995440.328
[2025-11-25 13:58:54] 2025-11-25 18:58:00,832 | INFO     | mean x: 1764059261.5496368
[2025-11-25 13:58:54] 2025-11-25 18:58:00,833 | INFO     | mean y: 2963485.514931396
[2025-11-25 13:58:54] 2025-11-25 18:58:00,833 | INFO     | intersect: -7707571833.954719
[2025-11-25 13:58:54] 2025-11-25 18:58:00,833 | INFO     | chi2: 3.0567825327593043
[2025-11-25 13:58:54] 2025-11-25 18:58:00,833 | INFO     | current chi2=3.0567825327593043 (change=40.30046779566864 %)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,834 | INFO     | sum of square deviations: 582651029514.8848
[2025-11-25 13:58:54] 2025-11-25 18:58:00,853 | INFO     | sum of deviations: 2508739023047.2007
[2025-11-25 13:58:54] 2025-11-25 18:58:00,853 | INFO     | mean x: 1764059414.0502431
[2025-11-25 13:58:54] 2025-11-25 18:58:00,854 | INFO     | mean y: 2964965.6742301458
[2025-11-25 13:58:54] 2025-11-25 18:58:00,854 | INFO     | intersect: -7592601620.188236
[2025-11-25 13:58:54] 2025-11-25 18:58:00,854 | INFO     | chi2: 3.030244637182386
[2025-11-25 13:58:54] 2025-11-25 18:58:00,854 | INFO     | current chi2=3.030244637182386 (change=0.8681643294056289 %)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,854 | INFO     | left removable region: 30
[2025-11-25 13:58:54] 2025-11-25 18:58:00,855 | INFO     | sum of square deviations: 546592328456.3441
[2025-11-25 13:58:54] 2025-11-25 18:58:00,872 | INFO     | sum of deviations: 2760532348341.008
[2025-11-25 13:58:54] 2025-11-25 18:58:00,872 | INFO     | mean x: 1764059536.062086
[2025-11-25 13:58:54] 2025-11-25 18:58:00,873 | INFO     | mean y: 2977145.133278146
[2025-11-25 13:58:54] 2025-11-25 18:58:00,873 | INFO     | intersect: -8906301599.139772
[2025-11-25 13:58:54] 2025-11-25 18:58:00,874 | INFO     | chi2: 0.20323699001957685
[2025-11-25 13:58:54] 2025-11-25 18:58:00,874 | INFO     | current memory leak: 5.05 B/s (using 1208 data points, chi2=0.20)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,875 | INFO     | could have reported an average CPU frequency of 3281 MHz (45 samples)
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | ..............................
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . Timing measurements:
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . get job = 0 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . initial setup = 4 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . payload setup = 37 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . stage-in = 0 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . payload execution = 76185 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . stage-out = 4 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | . log creation = 1 s
[2025-11-25 13:58:54] 2025-11-25 18:58:00,876 | INFO     | ..............................
[2025-11-25 13:58:54] 2025-11-25 18:58:01,271 | INFO     | 
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | job summary report
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | --------------------------------------------------
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | PanDA job id: 6895371420
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | task id: 47556137
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | errors: (none)
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | pilot state: finished 
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | transexitcode: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:01,272 | INFO     | exeerrorcode: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | exeerrordiag: 
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | exitcode: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | exitmsg: OK
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | cpuconsumptiontime: 200154 s
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | nevents: 1000
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | neventsw: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | pid: 2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:01,273 | INFO     | pgrp: 2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | corecount: 8
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | event service: False
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 22: 2284628, 23: 2284656, 76226: 2345775, 76232: 2354830, 76242: 2355020}
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | --------------------------------------------------
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | 
[2025-11-25 13:58:54] 2025-11-25 18:58:01,275 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 13:58:54] 2025-11-25 18:58:01,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:58:54] 2025-11-25 18:58:01,364 | INFO     | job 6895371420 has completed (purged errors)
[2025-11-25 13:58:54] 2025-11-25 18:58:01,364 | INFO     | overall cleanup function is called
[2025-11-25 13:58:54] 2025-11-25 18:58:02,509 | INFO     | --- collectZombieJob: --- 10, [2677092]
[2025-11-25 13:58:54] 2025-11-25 18:58:02,509 | INFO     | zombie collector waiting for pid 2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:02,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:58:54] 2025-11-25 18:58:02,509 | INFO     | collected zombie processes
[2025-11-25 13:58:54] 2025-11-25 18:58:02,509 | INFO     | will attempt to kill all subprocesses of pid=2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:03,855 | INFO     | process IDs to be killed: [2677092] (in reverse order)
[2025-11-25 13:58:54] 2025-11-25 18:58:04,025 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:58:54] 2025-11-25 18:58:04,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:58:54] 2025-11-25 18:58:04,045 | INFO     | did not find any defunct processes belonging to 2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:04,064 | INFO     | did not find any defunct processes belonging to 2677092
[2025-11-25 13:58:54] 2025-11-25 18:58:04,066 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:58:54] 2025-11-25 18:58:04,066 | INFO     | ready for new job
[2025-11-25 13:58:54] 2025-11-25 18:58:04,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:58:54] 2025-11-25 18:58:04,131 | INFO     | ***************************************
[2025-11-25 13:58:54] 2025-11-25 18:58:04,132 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:58:54] 2025-11-25 18:58:04,132 | INFO     | ***************************************
[2025-11-25 13:58:54] 2025-11-25 18:58:04,132 | INFO     | 
[2025-11-25 13:58:54] 2025-11-25 18:58:04,171 | INFO     | architecture information:
[2025-11-25 13:58:54] 2025-11-25 18:58:04,188 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:58:54] 2025-11-25 18:58:04,238 | INFO     | cat /etc/os-release:
[2025-11-25 13:58:54] NAME="CentOS Linux"
[2025-11-25 13:58:54] VERSION="7 (Core)"
[2025-11-25 13:58:54] ID="centos"
[2025-11-25 13:58:54] ID_LIKE="rhel fedora"
[2025-11-25 13:58:54] VERSION_ID="7"
[2025-11-25 13:58:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:58:54] ANSI_COLOR="0;31"
[2025-11-25 13:58:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:58:54] HOME_URL="https://www.centos.org/"
[2025-11-25 13:58:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:58:54] 
[2025-11-25 13:58:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:58:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:58:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:58:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:58:54] 
[2025-11-25 13:58:54] 2025-11-25 18:58:04,239 | INFO     | ***************************************
[2025-11-25 13:58:54] 2025-11-25 18:58:04,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 13:58:54] 2025-11-25 18:58:04,876 | INFO     | sufficient remaining disk space (90580189184 B)
[2025-11-25 13:58:54] 2025-11-25 18:58:04,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:58:54] 2025-11-25 18:58:04,876 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:58:54] 2025-11-25 18:58:04,876 | INFO     | update_server=False
[2025-11-25 13:58:54] 2025-11-25 18:58:04,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:58:54] 2025-11-25 18:58:04,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:58:54] 2025-11-25 18:58:04,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:58:54] 2025-11-25 18:58:04,878 | INFO     | aborting loop
[2025-11-25 13:58:54] 2025-11-25 18:58:05,230 | INFO     | all data control threads have been joined
[2025-11-25 13:58:54] 2025-11-25 18:58:05,468 | INFO     | all job control threads have been joined
[2025-11-25 13:58:54] 2025-11-25 18:58:05,883 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:05,883 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:05,930 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:05,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:58:54] 2025-11-25 18:58:06,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:58:54] 2025-11-25 18:58:06,074 | INFO     | all payload control threads have been joined
[2025-11-25 13:58:54] 2025-11-25 18:58:06,133 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,236 | INFO     | [data] control thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,393 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,474 | INFO     | [job] control thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,768 | INFO     | [job] validate thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,892 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:06,930 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:07,051 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:07,056 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:07,079 | INFO     | [payload] control thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:07,088 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:09,999 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:15,419 | INFO     | job.realtimelogging is not enabled
[2025-11-25 13:58:54] 2025-11-25 18:58:16,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:58:54] 2025-11-25 18:58:34,326 | INFO     | PID=2669027 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:58:54] 2025-11-25 18:58:34,327 | INFO     | .. there are 34 such processes running
[2025-11-25 13:58:54] 2025-11-25 18:58:34,327 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:58:54] 2025-11-25 18:58:34,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:58:54] 2025-11-25 18:58:34,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:58:54] 2025-11-25 18:58:47,936 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:58:54] 2025-11-25 18:58:49,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223575795520)>', '<ExcThread(monitor, started 140222402643712)>']
[2025-11-25 13:58:54] 2025-11-25 18:58:49,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:58:54] 2025-11-25 18:58:49,530 | INFO     | [monitor] control thread has ended
[2025-11-25 13:58:54] 2025-11-25 18:58:54,538 | INFO     | all workflow threads have been joined
[2025-11-25 13:58:54] 2025-11-25 18:58:54,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:58:54] 2025-11-25 18:58:54,543 | INFO     | traces error code: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:54,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:58:54] 2025-11-25 18:58:54,686 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:58:54] 2025-11-25 18:58:54,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:58:54] 2025-11-25 18:58:54,691 [wrapper] pilotpid: 2669027
[2025-11-25 13:58:54] 2025-11-25 18:58:54,693 [wrapper] Pilot exit status: 0
[2025-11-25 13:58:54] 2025-11-25 18:58:54,710 [wrapper] pandaids: 6895371420
[2025-11-25 13:58:54] 2025-11-25 18:58:54,813 [wrapper] cleanup supervisor_pilot 3135390 2669028
[2025-11-25 13:58:54] 2025-11-25 18:58:54,816 [wrapper] Test setup, not cleaning
[2025-11-25 13:58:54] 2025-11-25 18:58:54,818 [wrapper] apfmon messages muted
[2025-11-25 13:58:54] 2025-11-25 18:58:54,820 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:58:54] 2025-11-25 18:58:54,823 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:58:54]  *** Error codes and diagnostics ***
[2025-11-25 13:58:54]     "exeErrorCode": 0,
[2025-11-25 13:58:54]     "exeErrorDiag": "",
[2025-11-25 13:58:54]     "pilotErrorCode": 0,
[2025-11-25 13:58:54]     "pilotErrorDiag": "",
[2025-11-25 13:58:54]  *** Listing of results directory ***
[2025-11-25 13:58:54] total 1328924
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 15:42 queuedata.json
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 15:42 pilot3.tar.gz
[2025-11-25 13:58:54] -rwx------. 1 boincer umatlas     36292 Nov 23 15:43 runpilot2-wrapper.sh
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas       100 Nov 24 16:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:58:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 16:45 run_atlas
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas       105 Nov 24 16:45 job.xml
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas 409649009 Nov 24 16:45 EVNT.47483658._000894.pool.root.1
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 16:45 start_atlas.sh
[2025-11-25 13:58:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 16:45 shared
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 16:45 input.tar.gz
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas         0 Nov 24 16:45 boinc_lockfile
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 16:45 pandaJob.out
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas        57 Nov 24 16:45 setup.sh.local
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas    991801 Nov 24 16:46 agis_schedconf.cvmfs.json
[2025-11-25 13:58:54] drwx------. 5 boincer umatlas      4096 Nov 24 16:46 pilot3
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas       533 Nov 25 13:49 boinc_task_state.xml
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas      6906 Nov 25 13:54 init_data.xml
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas 922510104 Nov 25 13:57 HITS.47556137._008804.pool.root.1
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas      1070 Nov 25 13:57 memory_monitor_summary.json
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas   1516240 Nov 25 13:57 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas   2333240 Nov 25 13:57 log.47556137._008804.job.log.tgz.1
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas      8600 Nov 25 13:58 heartbeat.json
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas        95 Nov 25 13:58 pilot_heartbeat.json
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas        29 Nov 25 13:58 wrapper_checkpoint.txt
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 13:58 boinc_mmap_file
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas      4896 Nov 25 13:58 pilotlog.txt
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas  10034335 Nov 25 13:58 log.47556137._008804.job.log.1
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas       353 Nov 25 13:58 output.list
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas       620 Nov 25 13:58 runtime_log
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas  12390400 Nov 25 13:58 result.tar.gz
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 13:58 runtime_log.err
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas       664 Nov 25 13:58 LizLDm46Vh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4kIKDm3T2IIo.diag
[2025-11-25 13:58:54] -rw-r--r--. 1 boincer umatlas     21108 Nov 25 13:58 stderr.txt
[2025-11-25 13:58:54] HITS file was successfully produced:
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas 922510104 Nov 25 13:57 shared/HITS.pool.root.1
[2025-11-25 13:58:54]  *** Contents of shared directory: ***
[2025-11-25 13:58:54] total 1313644
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas 409649009 Nov 24 16:45 ATLAS.root_0
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 16:45 start_atlas.sh
[2025-11-25 13:58:54] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 16:45 input.tar.gz
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas 922510104 Nov 25 13:57 HITS.pool.root.1
[2025-11-25 13:58:54] -rw-------. 1 boincer umatlas  12390400 Nov 25 13:58 result.tar.gz
13:58:56 (2662736): run_atlas exited; CPU time 200749.204723
13:58:56 (2662736): called boinc_finish(0)

</stderr_txt>
]]>

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