Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:12:53 (25898): wrapper (7.7.26015): starting
13:12:53 (25898): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 13:12:53] Arguments: --nthreads 8
[2025-11-24 13:12:53] Threads: 8
[2025-11-24 13:12:53] Checking for CVMFS
[2025-11-24 13:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:12:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:12:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:12:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:12:54] 2.11.2.0 27562 331532 279456 153254 3 90 14439940 18432000 2767 130560 7 673694826 99.310 1127038426 26038 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-24 13:12:54] CVMFS is ok
[2025-11-24 13:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:12:54] Further information can be found at the LHC@home message board.
[2025-11-24 13:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:12:54] Checking for apptainer binary...
[2025-11-24 13:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:12:54] Running /usr/bin/apptainer --version
[2025-11-24 13:12:54] apptainer version 1.3.2-1.el7
[2025-11-24 13:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:12:55] c-9-30.aglt2.org
[2025-11-24 13:12:55] apptainer works
[2025-11-24 13:12:55] Set ATHENA_PROC_NUMBER=8
[2025-11-24 13:12:55] Set ATHENA_CORE_NUMBER=8
[2025-11-24 13:12:55] Starting ATLAS job with PandaID=6895331081
[2025-11-24 13:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:39:57]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:39:57] 2025-11-25 11:39:35,517 | INFO     | time since job start (62789s) is within the limit (172800.0s)
[2025-11-25 06:39:57] 2025-11-25 11:39:36,850 | INFO     | monitor loop #4342: job 0:6895331081 is in state 'finished'
[2025-11-25 06:39:57] 2025-11-25 11:39:36,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,137 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 06:39:57] 2025-11-25 11:39:37,144 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.8920625000014
[2025-11-25 06:39:57] 2025-11-25 11:39:37,151 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895331081/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,152 | INFO     | extracted standard info from prmon json
[2025-11-25 06:39:57] 2025-11-25 11:39:37,152 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:39:57] 2025-11-25 11:39:37,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:39:57] 2025-11-25 11:39:37,178 | INFO     | fitting pss+swap vs Time
[2025-11-25 06:39:57] 2025-11-25 11:39:37,179 | INFO     | sum of square deviations: 337850631713.45233
[2025-11-25 06:39:57] 2025-11-25 11:39:37,209 | INFO     | sum of deviations: 1868810050960.0261
[2025-11-25 06:39:57] 2025-11-25 11:39:37,209 | INFO     | mean x: 1764039368.6239066
[2025-11-25 06:39:57] 2025-11-25 11:39:37,209 | INFO     | mean y: 2867736.3566569486
[2025-11-25 06:39:57] 2025-11-25 11:39:37,209 | INFO     | intersect: -9754860066.767859
[2025-11-25 06:39:57] 2025-11-25 11:39:37,211 | INFO     | chi2: 4.579399908802066
[2025-11-25 06:39:57] 2025-11-25 11:39:37,212 | INFO     | sum of square deviations: 332949786791.4924
[2025-11-25 06:39:57] 2025-11-25 11:39:37,246 | INFO     | sum of deviations: 2132246102253.023
[2025-11-25 06:39:57] 2025-11-25 11:39:37,247 | INFO     | mean x: 1764039216.1269531
[2025-11-25 06:39:57] 2025-11-25 11:39:37,247 | INFO     | mean y: 2875927.869140625
[2025-11-25 06:39:57] 2025-11-25 11:39:37,247 | INFO     | intersect: -11294220186.99849
[2025-11-25 06:39:57] 2025-11-25 11:39:37,248 | INFO     | chi2: 2.5353440711880944
[2025-11-25 06:39:57] 2025-11-25 11:39:37,249 | INFO     | current chi2=2.5353440711880944 (change=44.635888507686154 %)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,250 | INFO     | sum of square deviations: 328096570669.5211
[2025-11-25 06:39:57] 2025-11-25 11:39:37,281 | INFO     | sum of deviations: 2224191778690.655
[2025-11-25 06:39:57] 2025-11-25 11:39:37,281 | INFO     | mean x: 1764039063.6300294
[2025-11-25 06:39:57] 2025-11-25 11:39:37,282 | INFO     | mean y: 2878813.481844946
[2025-11-25 06:39:57] 2025-11-25 11:39:37,282 | INFO     | intersect: -11955677091.593805
[2025-11-25 06:39:57] 2025-11-25 11:39:37,283 | INFO     | chi2: 2.169121226102569
[2025-11-25 06:39:57] 2025-11-25 11:39:37,283 | INFO     | current chi2=2.169121226102569 (change=14.444700001365435 %)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,283 | INFO     | right removable region: 1018
[2025-11-25 06:39:57] 2025-11-25 11:39:37,285 | INFO     | sum of square deviations: 332949395171.4924
[2025-11-25 06:39:57] 2025-11-25 11:39:37,306 | INFO     | sum of deviations: 1624456681140.7
[2025-11-25 06:39:57] 2025-11-25 11:39:37,306 | INFO     | mean x: 1764039521.1269531
[2025-11-25 06:39:57] 2025-11-25 11:39:37,306 | INFO     | mean y: 2875328.3251953125
[2025-11-25 06:39:57] 2025-11-25 11:39:37,306 | INFO     | intersect: -8603855386.457848
[2025-11-25 06:39:57] 2025-11-25 11:39:37,307 | INFO     | chi2: 2.7631546367644737
[2025-11-25 06:39:57] 2025-11-25 11:39:37,307 | INFO     | current chi2=2.7631546367644737 (change=39.66120688753534 %)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,308 | INFO     | sum of square deviations: 328095787429.52136
[2025-11-25 06:39:57] 2025-11-25 11:39:37,336 | INFO     | sum of deviations: 1539859210083.913
[2025-11-25 06:39:57] 2025-11-25 11:39:37,336 | INFO     | mean x: 1764039673.6300294
[2025-11-25 06:39:57] 2025-11-25 11:39:37,336 | INFO     | mean y: 2877985.8459273796
[2025-11-25 06:39:57] 2025-11-25 11:39:37,336 | INFO     | intersect: -8276328399.807921
[2025-11-25 06:39:57] 2025-11-25 11:39:37,338 | INFO     | chi2: 2.6650624199859436
[2025-11-25 06:39:57] 2025-11-25 11:39:37,338 | INFO     | current chi2=2.6650624199859436 (change=3.550008221522902 %)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,338 | INFO     | left removable region: 20
[2025-11-25 06:39:57] 2025-11-25 11:39:37,339 | INFO     | sum of square deviations: 308226416295.7956
[2025-11-25 06:39:57] 2025-11-25 11:39:37,369 | INFO     | sum of deviations: 1774529233846.063
[2025-11-25 06:39:57] 2025-11-25 11:39:37,370 | INFO     | mean x: 1764039643.1422846
[2025-11-25 06:39:57] 2025-11-25 11:39:37,370 | INFO     | mean y: 2892938.858717435
[2025-11-25 06:39:57] 2025-11-25 11:39:37,370 | INFO     | intersect: -10153082509.447012
[2025-11-25 06:39:57] 2025-11-25 11:39:37,371 | INFO     | chi2: 0.19579960370975028
[2025-11-25 06:39:57] 2025-11-25 11:39:37,372 | INFO     | current memory leak: 5.76 B/s (using 998 data points, chi2=0.20)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,373 | INFO     | could have reported an average CPU frequency of 2999 MHz (38 samples)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,373 | INFO     | ..............................
[2025-11-25 06:39:57] 2025-11-25 11:39:37,373 | INFO     | . Timing measurements:
[2025-11-25 06:39:57] 2025-11-25 11:39:37,373 | INFO     | . get job = 0 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . initial setup = 2 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . payload setup = 5 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . stage-in = 0 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . payload execution = 62753 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . stage-out = 4 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | . log creation = 0 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,374 | INFO     | ..............................
[2025-11-25 06:39:57] 2025-11-25 11:39:37,523 | INFO     | 
[2025-11-25 06:39:57] 2025-11-25 11:39:37,524 | INFO     | time since job start (62791s) is within the limit (172800.0s)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,524 | INFO     | job summary report
[2025-11-25 06:39:57] 2025-11-25 11:39:37,524 | INFO     | --------------------------------------------------
[2025-11-25 06:39:57] 2025-11-25 11:39:37,524 | INFO     | PanDA job id: 6895331081
[2025-11-25 06:39:57] 2025-11-25 11:39:37,524 | INFO     | task id: 47556149
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | errors: (none)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | pilot state: finished 
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | transexitcode: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | exeerrorcode: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:37,525 | INFO     | exeerrordiag: 
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | exitcode: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | exitmsg: OK
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | cpuconsumptiontime: 483884 s
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | nevents: 1000
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | neventsw: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | pid: 37053
[2025-11-25 06:39:57] 2025-11-25 11:39:37,526 | INFO     | pgrp: 37053
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | corecount: 8
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | event service: False
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | sizes: {0: 2284257, 1: 2284257, 4: 2284547, 12: 2284575, 62763: 2337791, 62768: 2346790, 62769: 2346974, 62775: 2347220}
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | --------------------------------------------------
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | 
[2025-11-25 06:39:57] 2025-11-25 11:39:37,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 06:39:57] 2025-11-25 11:39:37,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:39:57] 2025-11-25 11:39:37,560 | INFO     | job 6895331081 has completed (purged errors)
[2025-11-25 06:39:57] 2025-11-25 11:39:37,560 | INFO     | overall cleanup function is called
[2025-11-25 06:39:57] 2025-11-25 11:39:38,574 | INFO     | --- collectZombieJob: --- 10, [37053]
[2025-11-25 06:39:57] 2025-11-25 11:39:38,575 | INFO     | zombie collector waiting for pid 37053
[2025-11-25 06:39:57] 2025-11-25 11:39:38,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:39:57] 2025-11-25 11:39:38,575 | INFO     | collected zombie processes
[2025-11-25 06:39:57] 2025-11-25 11:39:38,575 | INFO     | will attempt to kill all subprocesses of pid=37053
[2025-11-25 06:39:57] 2025-11-25 11:39:38,864 | INFO     | process IDs to be killed: [37053] (in reverse order)
[2025-11-25 06:39:57] 2025-11-25 11:39:38,945 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:39:57] 2025-11-25 11:39:38,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:39:57] 2025-11-25 11:39:38,956 | INFO     | did not find any defunct processes belonging to 37053
[2025-11-25 06:39:57] 2025-11-25 11:39:38,966 | INFO     | did not find any defunct processes belonging to 37053
[2025-11-25 06:39:57] 2025-11-25 11:39:38,968 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:39:57] 2025-11-25 11:39:38,968 | INFO     | ready for new job
[2025-11-25 06:39:57] 2025-11-25 11:39:38,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:39:57] 2025-11-25 11:39:38,973 | INFO     | ***************************************
[2025-11-25 06:39:57] 2025-11-25 11:39:38,973 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:39:57] 2025-11-25 11:39:38,973 | INFO     | ***************************************
[2025-11-25 06:39:57] 2025-11-25 11:39:38,974 | INFO     | 
[2025-11-25 06:39:57] 2025-11-25 11:39:38,975 | INFO     | architecture information:
[2025-11-25 06:39:57] 2025-11-25 11:39:38,976 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:39:57] 2025-11-25 11:39:38,987 | INFO     | cat /etc/os-release:
[2025-11-25 06:39:57] NAME="CentOS Linux"
[2025-11-25 06:39:57] VERSION="7 (Core)"
[2025-11-25 06:39:57] ID="centos"
[2025-11-25 06:39:57] ID_LIKE="rhel fedora"
[2025-11-25 06:39:57] VERSION_ID="7"
[2025-11-25 06:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:39:57] ANSI_COLOR="0;31"
[2025-11-25 06:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:39:57] HOME_URL="https://www.centos.org/"
[2025-11-25 06:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:39:57] 
[2025-11-25 06:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:39:57] 
[2025-11-25 06:39:57] 2025-11-25 11:39:38,987 | INFO     | ***************************************
[2025-11-25 06:39:57] 2025-11-25 11:39:39,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 06:39:57] 2025-11-25 11:39:39,506 | INFO     | sufficient remaining disk space (101935218688 B)
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | INFO     | update_server=False
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 06:39:57] 2025-11-25 11:39:39,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:39:57] 2025-11-25 11:39:39,508 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:39:57] 2025-11-25 11:39:39,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:39:57] 2025-11-25 11:39:39,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:39:57] 2025-11-25 11:39:39,697 | INFO     | all data control threads have been joined
[2025-11-25 06:39:57] 2025-11-25 11:39:39,784 | INFO     | all job control threads have been joined
[2025-11-25 06:39:57] 2025-11-25 11:39:40,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:39:57] 2025-11-25 11:39:40,361 | INFO     | aborting loop
[2025-11-25 06:39:57] 2025-11-25 11:39:40,512 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,513 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,549 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,620 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,701 | INFO     | all payload control threads have been joined
[2025-11-25 06:39:57] 2025-11-25 11:39:40,702 | INFO     | [data] control thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,727 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,790 | INFO     | [job] control thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:40,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:39:57] 2025-11-25 11:39:41,010 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,345 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,366 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,425 | INFO     | [job] validate thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,445 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,706 | INFO     | [payload] control thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:41,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:39:57] 2025-11-25 11:39:42,910 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:45,860 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:39:57] 2025-11-25 11:39:51,458 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:39:57] 2025-11-25 11:39:52,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707491903296)>', '<ExcThread(monitor, started 139707182716672)>']
[2025-11-25 06:39:57] 2025-11-25 11:39:52,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:39:57] 2025-11-25 11:39:52,584 | INFO     | [monitor] control thread has ended
[2025-11-25 06:39:57] 2025-11-25 11:39:57,095 | INFO     | all workflow threads have been joined
[2025-11-25 06:39:57] 2025-11-25 11:39:57,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:39:57] 2025-11-25 11:39:57,095 | INFO     | traces error code: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:57,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:39:57] 2025-11-25 11:39:57,175 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:39:57] 2025-11-25 11:39:57,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:39:57] 2025-11-25 11:39:57,180 [wrapper] pilotpid: 30108
[2025-11-25 06:39:57] 2025-11-25 11:39:57,182 [wrapper] Pilot exit status: 0
[2025-11-25 06:39:57] 2025-11-25 11:39:57,190 [wrapper] pandaids: 6895331081
[2025-11-25 06:39:57] 2025-11-25 11:39:57,237 [wrapper] cleanup supervisor_pilot  1512 30109
[2025-11-25 06:39:57] 2025-11-25 11:39:57,239 [wrapper] Test setup, not cleaning
[2025-11-25 06:39:57] 2025-11-25 11:39:57,241 [wrapper] apfmon messages muted
[2025-11-25 06:39:57] 2025-11-25 11:39:57,243 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:39:57] 2025-11-25 11:39:57,245 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:39:57]  *** Error codes and diagnostics ***
[2025-11-25 06:39:57]     "exeErrorCode": 0,
[2025-11-25 06:39:57]     "exeErrorDiag": "",
[2025-11-25 06:39:57]     "pilotErrorCode": 0,
[2025-11-25 06:39:57]     "pilotErrorDiag": "",
[2025-11-25 06:39:57]  *** Listing of results directory ***
[2025-11-25 06:39:57] total 1319712
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 17:05 pilot3.tar.gz
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 17:22 queuedata.json
[2025-11-25 06:39:57] -rwx------ 1 boincer umatlas     36292 Nov 21 17:24 runpilot2-wrapper.sh
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas       100 Nov 24 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:39:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 13:12 run_atlas
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas       105 Nov 24 13:12 job.xml
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas 405591247 Nov 24 13:12 EVNT.47483658._001045.pool.root.1
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 13:12 start_atlas.sh
[2025-11-25 06:39:57] drwxrwx--x 2 boincer umatlas      4096 Nov 24 13:12 shared
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 13:12 input.tar.gz
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas         0 Nov 24 13:12 boinc_lockfile
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 13:12 pandaJob.out
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas        57 Nov 24 13:12 setup.sh.local
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas    991801 Nov 24 13:13 agis_schedconf.cvmfs.json
[2025-11-25 06:39:57] drwx------ 5 boincer umatlas      4096 Nov 24 13:13 pilot3
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas       533 Nov 25 06:28 boinc_task_state.xml
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas      6037 Nov 25 06:37 init_data.xml
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas 920264842 Nov 25 06:38 HITS.47556149._000317.pool.root.1
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas      1062 Nov 25 06:39 memory_monitor_summary.json
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas        95 Nov 25 06:39 pilot_heartbeat.json
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas   1516240 Nov 25 06:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas   2230386 Nov 25 06:39 log.47556149._000317.job.log.tgz.1
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas      8644 Nov 25 06:39 heartbeat.json
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 06:39 boinc_mmap_file
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas        29 Nov 25 06:39 wrapper_checkpoint.txt
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas      4553 Nov 25 06:39 pilotlog.txt
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas   8572292 Nov 25 06:39 log.47556149._000317.job.log.1
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas       353 Nov 25 06:39 output.list
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas       620 Nov 25 06:39 runtime_log
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas  10823680 Nov 25 06:39 result.tar.gz
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas      9333 Nov 25 06:39 runtime_log.err
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas       665 Nov 25 06:39 ad8NDmkjog8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhkJKDm4bNLWn.diag
[2025-11-25 06:39:57] -rw-r--r-- 1 boincer umatlas     21259 Nov 25 06:39 stderr.txt
[2025-11-25 06:39:57] HITS file was successfully produced:
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas 920264842 Nov 25 06:38 shared/HITS.pool.root.1
[2025-11-25 06:39:57]  *** Contents of shared directory: ***
[2025-11-25 06:39:57] total 1305960
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas 405591247 Nov 24 13:12 ATLAS.root_0
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 13:12 start_atlas.sh
[2025-11-25 06:39:57] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 13:12 input.tar.gz
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas 920264842 Nov 25 06:38 HITS.pool.root.1
[2025-11-25 06:39:57] -rw------- 1 boincer umatlas  10823680 Nov 25 06:39 result.tar.gz
06:39:59 (25898): run_atlas exited; CPU time 484305.363925
06:39:59 (25898): called boinc_finish(0)

</stderr_txt>
]]>

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