Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:51:57 (3701846): wrapper (7.7.26015): starting
08:51:57 (3701846): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 08:51:57] Arguments: --nthreads 2
[2025-11-27 08:51:57] Threads: 2
[2025-11-27 08:51:57] Checking for CVMFS
[2025-11-27 08:51:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:51:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:51:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:51:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:51:58] 2.9.2.0 2243680 12462 58852 153353 2 81 8528306 36864000 0 130560 2 4021572 99.860 718492 740 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 08:51:58] CVMFS is ok
[2025-11-27 08:51:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:51:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:51:58] Further information can be found at the LHC@home message board.
[2025-11-27 08:51:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:51:58] Checking for apptainer binary...
[2025-11-27 08:51:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:51:58] Running /usr/bin/apptainer --version
[2025-11-27 08:51:58] apptainer version 1.4.1-1.1
[2025-11-27 08:51:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:51:58] belleA263
[2025-11-27 08:51:58] apptainer works
[2025-11-27 08:51:58] Set ATHENA_PROC_NUMBER=2
[2025-11-27 08:51:58] Set ATHENA_CORE_NUMBER=2
[2025-11-27 08:51:58] Starting ATLAS job with PandaID=6895369848
[2025-11-27 08:51:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:59:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:59:18] 2025-11-27 19:58:13,840 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 20:59:18] 2025-11-27 19:58:13,841 | INFO     | executing command: lscpu
[2025-11-27 20:59:18] 2025-11-27 19:58:13,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 20:59:18] 2025-11-27 19:58:14,962 | INFO     | time since job start (43564s) is within the limit (172800.0s)
[2025-11-27 20:59:18] 2025-11-27 19:58:16,145 | INFO     | monitor loop #3318: job 0:6895369848 is in state 'finished'
[2025-11-27 20:59:18] 2025-11-27 19:58:16,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:59:18] 2025-11-27 19:58:16,968 | INFO     | time since job start (43566s) is within the limit (172800.0s)
[2025-11-27 20:59:18] 2025-11-27 19:58:18,648 | INFO     | monitor loop #3319: job 0:6895369848 is in state 'finished'
[2025-11-27 20:59:18] 2025-11-27 19:58:18,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:59:18] 2025-11-27 19:58:18,974 | INFO     | time since job start (43568s) is within the limit (172800.0s)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,947 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:59:18] 2025-11-27 19:58:19,948 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4577.0555
[2025-11-27 20:59:18] 2025-11-27 19:58:19,948 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895369848/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,949 | INFO     | extracted standard info from prmon json
[2025-11-27 20:59:18] 2025-11-27 19:58:19,949 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:59:18] 2025-11-27 19:58:19,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:59:18] 2025-11-27 19:58:19,952 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:59:18] 2025-11-27 19:58:19,953 | INFO     | sum of square deviations: 112868358102.5
[2025-11-27 20:59:18] 2025-11-27 19:58:19,957 | INFO     | sum of deviations: 317211015532.49994
[2025-11-27 20:59:18] 2025-11-27 19:58:19,957 | INFO     | mean x: 1764251702.5
[2025-11-27 20:59:18] 2025-11-27 19:58:19,957 | INFO     | mean y: 2014943.9173669468
[2025-11-27 20:59:18] 2025-11-27 19:58:19,957 | INFO     | intersect: -4956328418.327141
[2025-11-27 20:59:18] 2025-11-27 19:58:19,957 | INFO     | chi2: 2.932616170008601
[2025-11-27 20:59:18] 2025-11-27 19:58:19,958 | INFO     | sum of square deviations: 110513737210.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | sum of deviations: 369009595369.0001
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | mean x: 1764251550.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | mean y: 2018284.6149506348
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | intersect: -5888885118.25832
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | chi2: 2.2249852954521994
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | current chi2=2.2249852954521994 (change=24.129679219300158 %)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | right removable region: 708
[2025-11-27 20:59:18] 2025-11-27 19:58:19,962 | INFO     | sum of square deviations: 110513737210.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,966 | INFO     | sum of deviations: 189681186955.00003
[2025-11-27 20:59:18] 2025-11-27 19:58:19,966 | INFO     | mean x: 1764251855.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,966 | INFO     | mean y: 2023193.8942172073
[2025-11-27 20:59:18] 2025-11-27 19:58:19,966 | INFO     | intersect: -3026065389.4106984
[2025-11-27 20:59:18] 2025-11-27 19:58:19,967 | INFO     | chi2: 1.0447445834737576
[2025-11-27 20:59:18] 2025-11-27 19:58:19,967 | INFO     | current chi2=1.0447445834737576 (change=64.37499751388557 %)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,967 | INFO     | sum of square deviations: 108192093680.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | sum of deviations: 150506771991.00003
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | mean x: 1764252007.5
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | mean y: 2025758.9090909092
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | intersect: -2452237446.430393
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | chi2: 0.7836578012856246
[2025-11-27 20:59:18] 2025-11-27 19:58:19,971 | INFO     | current chi2=0.7836578012856246 (change=24.99048918923552 %)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,972 | INFO     | left removable region: 20
[2025-11-27 20:59:18] 2025-11-27 19:58:19,972 | INFO     | sum of square deviations: 100981733372.0
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | sum of deviations: 186210823358.5
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | mean x: 1764252129.5
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | mean y: 2030278.8066860465
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | intersect: -3251259506.148363
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | chi2: 0.07058725481966728
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | current memory leak: 1.84 B/s (using 688 data points, chi2=0.07)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | could have reported an average CPU frequency of 4516 MHz (28 samples)
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | ..............................
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . Timing measurements:
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . get job = 0 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . initial setup = 1 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . payload setup = 6 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . stage-in = 0 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . payload execution = 43532 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . stage-out = 1 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | . log creation = 0 s
[2025-11-27 20:59:18] 2025-11-27 19:58:19,976 | INFO     | ..............................
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | 
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | job summary report
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | --------------------------------------------------
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | PanDA job id: 6895369848
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | task id: 47556137
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | errors: (none)
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | pilot state: finished 
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | transexitcode: 0
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | exeerrorcode: 0
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | exeerrordiag: 
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | exitcode: 0
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | exitmsg: OK
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | cpuconsumptiontime: 86140 s
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | nevents: 1000
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | neventsw: 0
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | pid: 3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | pgrp: 3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | corecount: 2
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | event service: False
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | sizes: {0: 2284311, 6: 2284573, 11: 2284601, 43542: 2330510, 43543: 2339510, 43546: 2339566, 43553: 2339940}
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | --------------------------------------------------
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | 
[2025-11-27 20:59:18] 2025-11-27 19:58:20,005 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 20:59:18] 2025-11-27 19:58:20,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | job 6895369848 has completed (purged errors)
[2025-11-27 20:59:18] 2025-11-27 19:58:20,017 | INFO     | overall cleanup function is called
[2025-11-27 20:59:18] 2025-11-27 19:58:21,024 | INFO     | --- collectZombieJob: --- 10, [3711975]
[2025-11-27 20:59:18] 2025-11-27 19:58:21,024 | INFO     | zombie collector waiting for pid 3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:21,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:59:18] 2025-11-27 19:58:21,025 | INFO     | collected zombie processes
[2025-11-27 20:59:18] 2025-11-27 19:58:21,025 | INFO     | will attempt to kill all subprocesses of pid=3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:21,059 | INFO     | process IDs to be killed: [3711975] (in reverse order)
[2025-11-27 20:59:18] 2025-11-27 19:58:21,080 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:59:18] 2025-11-27 19:58:21,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:59:18] 2025-11-27 19:58:21,081 | INFO     | did not find any defunct processes belonging to 3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:21,081 | INFO     | did not find any defunct processes belonging to 3711975
[2025-11-27 20:59:18] 2025-11-27 19:58:21,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:59:18] 2025-11-27 19:58:21,082 | INFO     | ready for new job
[2025-11-27 20:59:18] 2025-11-27 19:58:21,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:59:18] 2025-11-27 19:58:21,083 | INFO     | ***************************************
[2025-11-27 20:59:18] 2025-11-27 19:58:21,083 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:59:18] 2025-11-27 19:58:21,083 | INFO     | ***************************************
[2025-11-27 20:59:18] 2025-11-27 19:58:21,083 | INFO     | 
[2025-11-27 20:59:18] 2025-11-27 19:58:21,084 | INFO     | architecture information:
[2025-11-27 20:59:18] 2025-11-27 19:58:21,084 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:59:18] 2025-11-27 19:58:21,092 | INFO     | cat /etc/os-release:
[2025-11-27 20:59:18] NAME="CentOS Linux"
[2025-11-27 20:59:18] VERSION="7 (Core)"
[2025-11-27 20:59:18] ID="centos"
[2025-11-27 20:59:18] ID_LIKE="rhel fedora"
[2025-11-27 20:59:18] VERSION_ID="7"
[2025-11-27 20:59:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:59:18] ANSI_COLOR="0;31"
[2025-11-27 20:59:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:59:18] HOME_URL="https://www.centos.org/"
[2025-11-27 20:59:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:59:18] 
[2025-11-27 20:59:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:59:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:59:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:59:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:59:18] 
[2025-11-27 20:59:18] 2025-11-27 19:58:21,092 | INFO     | ***************************************
[2025-11-27 20:59:18] 2025-11-27 19:58:21,595 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | INFO     | sufficient remaining disk space (624622043136 B)
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | INFO     | update_server=False
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:59:18] 2025-11-27 19:58:21,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:59:18] 2025-11-27 19:58:22,070 | INFO     | all data control threads have been joined
[2025-11-27 20:59:18] 2025-11-27 19:58:22,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:59:18] 2025-11-27 19:58:22,157 | INFO     | aborting loop
[2025-11-27 20:59:18] 2025-11-27 19:58:22,515 | INFO     | all payload control threads have been joined
[2025-11-27 20:59:18] 2025-11-27 19:58:22,528 | INFO     | all job control threads have been joined
[2025-11-27 20:59:18] 2025-11-27 19:58:22,609 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:22,610 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:22,869 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:22,974 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:22,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:59:18] 2025-11-27 19:58:23,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:59:18] 2025-11-27 19:58:23,076 | INFO     | [data] control thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,163 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,521 | INFO     | [payload] control thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,522 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,533 | INFO     | [job] control thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,595 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,669 | INFO     | [job] validate thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,807 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:23,920 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:24,984 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:27,071 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:32,190 | INFO     | job.realtimelogging is not enabled
[2025-11-27 20:59:18] 2025-11-27 19:58:33,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:59:18] 2025-11-27 19:58:52,099 | INFO     | PID=3705554 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:59:18] 2025-11-27 19:58:52,099 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:59:18] 2025-11-27 19:58:52,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:59:18] 2025-11-27 19:58:52,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:59:18] 2025-11-27 19:59:11,840 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:59:18] 2025-11-27 19:59:13,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179836671808)>', '<ExcThread(monitor, started 140179041924864)>']
[2025-11-27 20:59:18] 2025-11-27 19:59:14,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:59:18] 2025-11-27 19:59:14,212 | INFO     | [monitor] control thread has ended
[2025-11-27 20:59:18] 2025-11-27 19:59:18,310 | INFO     | all workflow threads have been joined
[2025-11-27 20:59:18] 2025-11-27 19:59:18,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:59:18] 2025-11-27 19:59:18,311 | INFO     | traces error code: 0
[2025-11-27 20:59:18] 2025-11-27 19:59:18,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:59:18] 2025-11-27 19:59:18,352 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:59:18] 2025-11-27 19:59:18,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:59:18] 2025-11-27 19:59:18,357 [wrapper] pilotpid: 3705554
[2025-11-27 20:59:18] 2025-11-27 19:59:18,359 [wrapper] Pilot exit status: 0
[2025-11-27 20:59:18] 2025-11-27 19:59:18,364 [wrapper] pandaids: 6895369848
[2025-11-27 20:59:18] 2025-11-27 19:59:18,377 [wrapper] cleanup supervisor_pilot 3783055 3705555
[2025-11-27 20:59:18] 2025-11-27 19:59:18,380 [wrapper] Test setup, not cleaning
[2025-11-27 20:59:18] 2025-11-27 19:59:18,381 [wrapper] apfmon messages muted
[2025-11-27 20:59:18] 2025-11-27 19:59:18,383 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:59:18] 2025-11-27 19:59:18,385 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:59:18]  *** Error codes and diagnostics ***
[2025-11-27 20:59:18]     "exeErrorCode": 0,
[2025-11-27 20:59:18]     "exeErrorDiag": "",
[2025-11-27 20:59:18]     "pilotErrorCode": 0,
[2025-11-27 20:59:18]     "pilotErrorDiag": "",
[2025-11-27 20:59:18]  *** Listing of results directory ***
[2025-11-27 20:59:18] total 1306220
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc    576529 Nov 23 21:16 pilot3.tar.gz
[2025-11-27 20:59:18] -rwx------ 1 boinc boinc     36292 Nov 23 21:34 runpilot2-wrapper.sh
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc      5112 Nov 23 21:34 queuedata.json
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc       100 Nov 27 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:59:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 08:51 run_atlas
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc       105 Nov 27 08:51 job.xml
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc 407289607 Nov 27 08:51 EVNT.47483658._000893.pool.root.1
[2025-11-27 20:59:18] drwxrwx--x 2 boinc boinc      4096 Nov 27 08:51 shared
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc    590097 Nov 27 08:51 input.tar.gz
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:51 start_atlas.sh
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:51 boinc_setup_complete
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc      6207 Nov 27 08:51 init_data.xml
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:51 boinc_lockfile
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc      2782 Nov 27 08:51 pandaJob.out
[2025-11-27 20:59:18] -rw------- 1 boinc boinc    991570 Nov 27 08:52 agis_schedconf.cvmfs.json
[2025-11-27 20:59:18] drwx------ 5 boinc boinc      4096 Nov 27 08:52 pilot3
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc       532 Nov 27 20:55 boinc_task_state.xml
[2025-11-27 20:59:18] -rw------- 1 boinc boinc 911744097 Nov 27 20:57 HITS.47556137._008791.pool.root.1
[2025-11-27 20:59:18] -rw------- 1 boinc boinc      1021 Nov 27 20:58 memory_monitor_summary.json
[2025-11-27 20:59:18] -rw------- 1 boinc boinc   1516240 Nov 27 20:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:59:18] -rw------- 1 boinc boinc   1210229 Nov 27 20:58 log.47556137._008791.job.log.tgz.1
[2025-11-27 20:59:18] -rw------- 1 boinc boinc      8561 Nov 27 20:58 heartbeat.json
[2025-11-27 20:59:18] -rw------- 1 boinc boinc        95 Nov 27 20:58 pilot_heartbeat.json
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc      8192 Nov 27 20:59 boinc_mmap_file
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc        28 Nov 27 20:59 wrapper_checkpoint.txt
[2025-11-27 20:59:18] -rw------- 1 boinc boinc      4824 Nov 27 20:59 pilotlog.txt
[2025-11-27 20:59:18] -rw------- 1 boinc boinc   6098022 Nov 27 20:59 log.47556137._008791.job.log.1
[2025-11-27 20:59:18] -rw------- 1 boinc boinc       353 Nov 27 20:59 output.list
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc       620 Nov 27 20:59 runtime_log
[2025-11-27 20:59:18] -rw------- 1 boinc boinc   7331840 Nov 27 20:59 result.tar.gz
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc      8913 Nov 27 20:59 runtime_log.err
[2025-11-27 20:59:18] -rw------- 1 boinc boinc       668 Nov 27 20:59 MixKDmsxVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdBLKDmFwO1rm.diag
[2025-11-27 20:59:18] -rw-r--r-- 1 boinc boinc     21495 Nov 27 20:59 stderr.txt
[2025-11-27 20:59:18] HITS file was successfully produced:
[2025-11-27 20:59:18] -rw------- 1 boinc boinc 911744097 Nov 27 20:57 shared/HITS.pool.root.1
[2025-11-27 20:59:18]  *** Contents of shared directory: ***
[2025-11-27 20:59:18] total 1295884
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc 407289607 Nov 27 08:51 ATLAS.root_0
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc    590097 Nov 27 08:51 input.tar.gz
[2025-11-27 20:59:18] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:51 start_atlas.sh
[2025-11-27 20:59:18] -rw------- 1 boinc boinc 911744097 Nov 27 20:57 HITS.pool.root.1
[2025-11-27 20:59:18] -rw------- 1 boinc boinc   7331840 Nov 27 20:59 result.tar.gz
20:59:20 (3701846): run_atlas exited; CPU time 86256.408759
20:59:20 (3701846): called boinc_finish(0)

</stderr_txt>
]]>

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