Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:38 (591549): wrapper (7.7.26015): starting
10:45:38 (591549): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 10:45:38] Arguments: --nthreads 12
[2025-11-24 10:45:38] Threads: 12
[2025-11-24 10:45:38] Checking for CVMFS
[2025-11-24 10:45:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:45:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:45:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:45:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:45:39] 2.11.5.0 2081521 25839 212492 153255 2 371 28077469 45568000 17734 130560 0 166654277 99.796 99091150 18839 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 10:45:39] CVMFS is ok
[2025-11-24 10:45:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:45:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:45:39] Further information can be found at the LHC@home message board.
[2025-11-24 10:45:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:45:39] Checking for apptainer binary...
[2025-11-24 10:45:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:45:39] Running /usr/bin/apptainer --version
[2025-11-24 10:45:39] apptainer version 1.4.1-1.el9
[2025-11-24 10:45:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:45:39] wns0041.triumf.lcg
[2025-11-24 10:45:39] apptainer works
[2025-11-24 10:45:39] Set ATHENA_PROC_NUMBER=12
[2025-11-24 10:45:39] Set ATHENA_CORE_NUMBER=12
[2025-11-24 10:45:39] Starting ATLAS job with PandaID=6895386987
[2025-11-24 10:45:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:51:00]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:51:00] 2025-11-24 18:49:59,593 | WARNING  | wrong length of table data, x=[1764009987.0, 1764010048.0], y=[1944.0, 493429.0] (must be same and length>=4)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,594 | INFO     | could have reported an average CPU frequency of 1318 MHz (4 samples)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . Timing measurements:
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . get job = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . initial setup = 3 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload setup = 8 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-in = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload execution = 90 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-out = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . log creation = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386987/pilotlog.txt
[2025-11-24 10:51:00] 2025-11-24 18:49:59,612 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 10:51:00] - Log from pilotlog.txt -
[2025-11-24 10:51:00] 2025-11-24 18:49:59,590 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895386987/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,591 | INFO     | extracted standard info from prmon json
[2025-11-24 10:51:00] 2025-11-24 18:49:59,591 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 10:51:00] 2025-11-24 18:49:59,593 | WARNING  | wrong length of table data, x=[1764009987.0, 1764010048.0], y=[1944.0, 493429.0] (must be same and length>=4)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,594 | INFO     | could have reported an average CPU frequency of 1318 MHz (4 samples)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . Timing measurements:
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . get job = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . initial setup = 3 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload setup = 8 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-in = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload execution = 90 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-out = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . log creation = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386987/pilotlog.txt
[2025-11-24 10:51:00] 2025-11-24 18:49:59,613 | WARNING  | 
[2025-11-24 10:51:00] [begin log extracts]
[2025-11-24 10:51:00] - Log from pilotlog.txt -
[2025-11-24 10:51:00] 2025-11-24 18:49:59,590 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895386987/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,591 | INFO     | extracted standard info from prmon json
[2025-11-24 10:51:00] 2025-11-24 18:49:59,591 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 10:51:00] 2025-11-24 18:49:59,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 10:51:00] 2025-11-24 18:49:59,593 | WARNING  | wrong length of table data, x=[1764009987.0, 1764010048.0], y=[1944.0, 493429.0] (must be same and length>=4)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,594 | INFO     | could have reported an average CPU frequency of 1318 MHz (4 samples)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . Timing measurements:
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . get job = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . initial setup = 3 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload setup = 8 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-in = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . payload execution = 90 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . stage-out = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | . log creation = 0 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,595 | INFO     | ..............................
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 10:51:00] 2025-11-24 18:49:59,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386987/pilotlog.txt
[2025-11-24 10:51:00] [end log extracts]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,613 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,614 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 10:51:00] 2025-11-24 18:49:59,719 | INFO     | 
[2025-11-24 10:51:00] 2025-11-24 18:49:59,719 | INFO     | job summary report
[2025-11-24 10:51:00] 2025-11-24 18:49:59,719 | INFO     | --------------------------------------------------
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | PanDA job id: 6895386987
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | task id: 47556149
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 10:47:46,292 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | pilot state: failed 
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | transexitcode: 65
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | exeerrorcode: 65
[2025-11-24 10:51:00] 2025-11-24 18:49:59,720 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | exitcode: 65
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | cpuconsumptiontime: 75 s
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | nevents: 0
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | neventsw: 0
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | pid: 606265
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | pgrp: 606265
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | corecount: 12
[2025-11-24 10:51:00] 2025-11-24 18:49:59,721 | INFO     | event service: False
[2025-11-24 10:51:00] 2025-11-24 18:49:59,722 | INFO     | sizes: {0: 2284136, 1: 2284335, 7: 2284597, 11: 2284625, 103: 2310021, 105: 2314311, 107: 2314467, 229: 2314633}
[2025-11-24 10:51:00] 2025-11-24 18:49:59,722 | INFO     | --------------------------------------------------
[2025-11-24 10:51:00] 2025-11-24 18:49:59,722 | INFO     | 
[2025-11-24 10:51:00] 2025-11-24 18:49:59,722 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 10:51:00] 2025-11-24 18:49:59,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:51:00] 2025-11-24 18:49:59,746 | INFO     | job 6895386987 has completed (purged errors)
[2025-11-24 10:51:00] 2025-11-24 18:49:59,747 | INFO     | overall cleanup function is called
[2025-11-24 10:51:00] 2025-11-24 18:50:00,760 | INFO     | --- collectZombieJob: --- 10, [606265]
[2025-11-24 10:51:00] 2025-11-24 18:50:00,760 | INFO     | zombie collector waiting for pid 606265
[2025-11-24 10:51:00] 2025-11-24 18:50:00,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:51:00] 2025-11-24 18:50:00,760 | INFO     | collected zombie processes
[2025-11-24 10:51:00] 2025-11-24 18:50:00,761 | INFO     | will attempt to kill all subprocesses of pid=606265
[2025-11-24 10:51:00] 2025-11-24 18:50:01,126 | INFO     | process IDs to be killed: [606265] (in reverse order)
[2025-11-24 10:51:00] 2025-11-24 18:50:01,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:51:00] 2025-11-24 18:50:01,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:51:00] 2025-11-24 18:50:01,278 | INFO     | did not find any defunct processes belonging to 606265
[2025-11-24 10:51:00] 2025-11-24 18:50:01,291 | INFO     | did not find any defunct processes belonging to 606265
[2025-11-24 10:51:00] 2025-11-24 18:50:01,293 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:51:00] 2025-11-24 18:50:01,294 | INFO     | ready for new job
[2025-11-24 10:51:00] 2025-11-24 18:50:01,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:51:00] 2025-11-24 18:50:01,296 | INFO     | ***************************************
[2025-11-24 10:51:00] 2025-11-24 18:50:01,296 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:51:00] 2025-11-24 18:50:01,296 | INFO     | ***************************************
[2025-11-24 10:51:00] 2025-11-24 18:50:01,296 | INFO     | 
[2025-11-24 10:51:00] 2025-11-24 18:50:01,300 | INFO     | architecture information:
[2025-11-24 10:51:00] 2025-11-24 18:50:01,301 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:51:00] 2025-11-24 18:50:01,324 | INFO     | cat /etc/os-release:
[2025-11-24 10:51:00] NAME="CentOS Linux"
[2025-11-24 10:51:00] VERSION="7 (Core)"
[2025-11-24 10:51:00] ID="centos"
[2025-11-24 10:51:00] ID_LIKE="rhel fedora"
[2025-11-24 10:51:00] VERSION_ID="7"
[2025-11-24 10:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:51:00] ANSI_COLOR="0;31"
[2025-11-24 10:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:51:00] HOME_URL="https://www.centos.org/"
[2025-11-24 10:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:51:00] 
[2025-11-24 10:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:51:00] 
[2025-11-24 10:51:00] 2025-11-24 18:50:01,324 | INFO     | ***************************************
[2025-11-24 10:51:00] 2025-11-24 18:50:01,828 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 10:51:00] 2025-11-24 18:50:01,846 | INFO     | sufficient remaining disk space (1628148072448 B)
[2025-11-24 10:51:00] 2025-11-24 18:50:01,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | INFO     | update_server=False
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:51:00] 2025-11-24 18:50:01,847 | INFO     | aborting loop
[2025-11-24 10:51:00] 2025-11-24 18:50:01,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:51:00] 2025-11-24 18:50:01,871 | INFO     | all data control threads have been joined
[2025-11-24 10:51:00] 2025-11-24 18:50:02,374 | INFO     | all job control threads have been joined
[2025-11-24 10:51:00] 2025-11-24 18:50:02,852 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:02,853 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:02,864 | INFO     | all payload control threads have been joined
[2025-11-24 10:51:00] 2025-11-24 18:50:02,877 | INFO     | [data] control thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:02,986 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,229 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,304 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,373 | INFO     | [job] validate thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,379 | INFO     | [job] control thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,643 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,853 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,870 | INFO     | [payload] control thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,876 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:03,930 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:04,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:51:00] 2025-11-24 18:50:05,737 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:05,853 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:51:00] 2025-11-24 18:50:30,051 | INFO     | 249s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 10:51:00] 2025-11-24 18:50:31,500 | INFO     | PID=597399 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 10:51:00] 2025-11-24 18:50:31,501 | INFO     | .. there are 28 such processes running
[2025-11-24 10:51:00] 2025-11-24 18:50:31,501 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:51:00] 2025-11-24 18:50:31,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:51:00] 2025-11-24 18:50:31,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:51:00] 2025-11-24 18:50:53,922 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:51:00] 2025-11-24 18:50:54,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806365460288)>', '<ExcThread(monitor, started 139805597882112)>']
[2025-11-24 10:51:00] 2025-11-24 18:50:55,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:51:00] 2025-11-24 18:50:55,626 | INFO     | [monitor] control thread has ended
[2025-11-24 10:51:00] 2025-11-24 18:50:59,851 | INFO     | all workflow threads have been joined
[2025-11-24 10:51:00] 2025-11-24 18:50:59,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:51:00] 2025-11-24 18:50:59,852 | INFO     | traces error code: 0
[2025-11-24 10:51:00] 2025-11-24 18:50:59,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:51:00] 2025-11-24 18:51:00,007 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:51:00] 2025-11-24 18:51:00,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:51:00] 2025-11-24 18:51:00,013 [wrapper] pilotpid: 597399
[2025-11-24 10:51:00] 2025-11-24 18:51:00,016 [wrapper] Pilot exit status: 0
[2025-11-24 10:51:00] 2025-11-24 18:51:00,028 [wrapper] pandaids: 6895386987
[2025-11-24 10:51:00] 2025-11-24 18:51:00,111 [wrapper] cleanup supervisor_pilot  597414 597400
[2025-11-24 10:51:00] 2025-11-24 18:51:00,114 [wrapper] Test setup, not cleaning
[2025-11-24 10:51:00] 2025-11-24 18:51:00,118 [wrapper] apfmon messages muted
[2025-11-24 10:51:00] 2025-11-24 18:51:00,121 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:51:00] 2025-11-24 18:51:00,124 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:51:00]  *** Error codes and diagnostics ***
[2025-11-24 10:51:00]     "exeErrorCode": 65,
[2025-11-24 10:51:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 10:51:00]     "pilotErrorCode": 1305,
[2025-11-24 10:51:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 10:51:00]  *** Listing of results directory ***
[2025-11-24 10:51:00] total 406440
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc    576529 Nov 23 22:20 pilot3.tar.gz
[2025-11-24 10:51:00] -rwx------. 1 boinc boinc     36292 Nov 23 22:23 runpilot2-wrapper.sh
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc      5112 Nov 23 22:23 queuedata.json
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc       100 Nov 24 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:51:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 10:45 run_atlas
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc       105 Nov 24 10:45 job.xml
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc      6595 Nov 24 10:45 init_data.xml
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc 411992958 Nov 24 10:45 EVNT.47483658._001257.pool.root.1
[2025-11-24 10:51:00] drwxrwx--x. 2 boinc boinc      4096 Nov 24 10:45 shared
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc    590102 Nov 24 10:45 input.tar.gz
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc     15847 Nov 24 10:45 start_atlas.sh
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc         0 Nov 24 10:45 boinc_lockfile
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc      2786 Nov 24 10:45 pandaJob.out
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc    991801 Nov 24 10:45 agis_schedconf.cvmfs.json
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc   1516227 Nov 24 10:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:51:00] drwx------. 5 boinc boinc      4096 Nov 24 10:45 pilot3
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc       524 Nov 24 10:47 boinc_task_state.xml
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc      1003 Nov 24 10:47 memory_monitor_summary.json
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc     48635 Nov 24 10:47 log.47556149._002438.job.log.tgz.1
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc        95 Nov 24 10:49 pilot_heartbeat.json
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc     10336 Nov 24 10:49 heartbeat.json
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc        23 Nov 24 10:50 wrapper_checkpoint.txt
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc      8192 Nov 24 10:50 boinc_mmap_file
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc      4936 Nov 24 10:50 pilotlog.txt
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc     97765 Nov 24 10:51 log.47556149._002438.job.log.1
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc       186 Nov 24 10:51 output.list
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc       620 Nov 24 10:51 runtime_log
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc    163840 Nov 24 10:51 result.tar.gz
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc      8636 Nov 24 10:51 runtime_log.err
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc       645 Nov 24 10:51 Jn8LDmv9eh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmVLKDmJD4hhm.diag
[2025-11-24 10:51:00] -rw-r--r--. 1 boinc boinc     22503 Nov 24 10:51 stderr.txt
[2025-11-24 10:51:00] No HITS result produced
[2025-11-24 10:51:00]  *** Contents of shared directory: ***
[2025-11-24 10:51:00] total 403100
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc 411992958 Nov 24 10:45 ATLAS.root_0
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc    590102 Nov 24 10:45 input.tar.gz
[2025-11-24 10:51:00] -rw-r--r--. 2 boinc boinc     15847 Nov 24 10:45 start_atlas.sh
[2025-11-24 10:51:00] -rw-------. 1 boinc boinc    163840 Nov 24 10:51 result.tar.gz
10:51:01 (591549): run_atlas exited; CPU time 71.253622
10:51:01 (591549): called boinc_finish(0)

</stderr_txt>
]]>

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