Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:08 (3387868): wrapper (7.7.26015): starting
16:35:08 (3387868): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:35:08] Arguments: --nthreads 8
[2025-11-24 16:35:08] Threads: 8
[2025-11-24 16:35:08] Checking for CVMFS
[2025-11-24 16:35:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:35:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:35:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:35:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:35:10] 2.13.2.0 6099 32069 295028 153259 0 353 37701752 40960001 11222 16776704 0 34695073 99.755 22399900 36197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 16:35:10] CVMFS is ok
[2025-11-24 16:35:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:35:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:35:10] Further information can be found at the LHC@home message board.
[2025-11-24 16:35:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:35:10] Checking for apptainer binary...
[2025-11-24 16:35:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:35:10] Running /usr/bin/apptainer --version
[2025-11-24 16:35:10] apptainer version 1.4.4-1.el9
[2025-11-24 16:35:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:35:11] c-210-31-2.aglt2.org
[2025-11-24 16:35:11] apptainer works
[2025-11-24 16:35:11] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:35:11] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:35:11] Starting ATLAS job with PandaID=6895368154
[2025-11-24 16:35:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:40:03 (3387868): BOINC client no longer exists - exiting
15:40:03 (3387868): timer handler: client dead, exiting
15:46:51 (1518132): wrapper (7.7.26015): starting
15:46:51 (1518132): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:46:51] Arguments: --nthreads 8
[2025-11-25 15:46:51] Threads: 8
[2025-11-25 15:46:51] This job has been restarted, cleaning up previous attempt
[2025-11-25 15:46:52] Checking for CVMFS
[2025-11-25 15:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:46:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:46:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:46:52] 2.13.2.0 6099 33461 291572 153297 3 54 22235767 40960001 8749 16776704 0 36932368 99.764 22974728 36132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 15:46:52] CVMFS is ok
[2025-11-25 15:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:46:52] Further information can be found at the LHC@home message board.
[2025-11-25 15:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:46:52] Checking for apptainer binary...
[2025-11-25 15:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:46:52] Running /usr/bin/apptainer --version
[2025-11-25 15:46:52] apptainer version 1.4.4-1.el9
[2025-11-25 15:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:46:53] c-210-31-2.aglt2.org
[2025-11-25 15:46:53] apptainer works
[2025-11-25 15:46:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:46:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:46:53] Starting ATLAS job with PandaID=6895368154
[2025-11-25 15:46:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:02:00]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:02:00] 2025-11-27 07:01:13,357 | INFO     | .. there are 13 such processes running
[2025-11-27 02:02:00] 2025-11-27 07:01:14,358 | INFO     | time since job start (123241s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:14,937 | INFO     | monitor loop #7516: job 0:6895368154 is in state 'finished'
[2025-11-27 02:02:00] 2025-11-27 07:01:14,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:02:00] 2025-11-27 07:01:16,365 | INFO     | time since job start (123243s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:17,453 | INFO     | monitor loop #7517: job 0:6895368154 is in state 'finished'
[2025-11-27 02:02:00] 2025-11-27 07:01:17,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:02:00] 2025-11-27 07:01:18,373 | INFO     | time since job start (123245s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:20,020 | INFO     | monitor loop #7518: job 0:6895368154 is in state 'finished'
[2025-11-27 02:02:00] 2025-11-27 07:01:20,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:02:00] 2025-11-27 07:01:20,380 | INFO     | time since job start (123247s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:22,387 | INFO     | time since job start (123249s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:22,527 | INFO     | monitor loop #7519: job 0:6895368154 is in state 'finished'
[2025-11-27 02:02:00] 2025-11-27 07:01:22,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:02:00] 2025-11-27 07:01:24,396 | INFO     | time since job start (123251s) is within the limit (172800.0s)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,036 | INFO     | monitor loop #7520: job 0:6895368154 is in state 'finished'
[2025-11-27 02:02:00] 2025-11-27 07:01:25,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,267 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:02:00] 2025-11-27 07:01:25,271 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2621.21125
[2025-11-27 02:02:00] 2025-11-27 07:01:25,282 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895368154/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,283 | INFO     | extracted standard info from prmon json
[2025-11-27 02:02:00] 2025-11-27 07:01:25,283 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:02:00] 2025-11-27 07:01:25,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:02:00] 2025-11-27 07:01:25,314 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:02:00] 2025-11-27 07:01:25,317 | INFO     | sum of square deviations: 2555824523170.46
[2025-11-27 02:02:00] 2025-11-27 07:01:25,432 | INFO     | sum of deviations: 6012890556541.669
[2025-11-27 02:02:00] 2025-11-27 07:01:25,433 | INFO     | mean x: 1764165259.9836633
[2025-11-27 02:02:00] 2025-11-27 07:01:25,433 | INFO     | mean y: 2966394.0198019804
[2025-11-27 02:02:00] 2025-11-27 07:01:25,433 | INFO     | intersect: -4147448681.728795
[2025-11-27 02:02:00] 2025-11-27 07:01:25,436 | INFO     | chi2: 17.70221214246859
[2025-11-27 02:02:00] 2025-11-27 07:01:25,443 | INFO     | sum of square deviations: 2536894526095.6157
[2025-11-27 02:02:00] 2025-11-27 07:01:25,594 | INFO     | sum of deviations: 6690839828555.194
[2025-11-27 02:02:00] 2025-11-27 07:01:25,594 | INFO     | mean x: 1764165107.4918115
[2025-11-27 02:02:00] 2025-11-27 07:01:25,594 | INFO     | mean y: 2971854.6496277917
[2025-11-27 02:02:00] 2025-11-27 07:01:25,594 | INFO     | intersect: -4649860986.422411
[2025-11-27 02:02:00] 2025-11-27 07:01:25,600 | INFO     | chi2: 14.637733824385183
[2025-11-27 02:02:00] 2025-11-27 07:01:25,601 | INFO     | current chi2=14.637733824385183 (change=17.311273265851064 %)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,601 | INFO     | right removable region: 2014
[2025-11-27 02:02:00] 2025-11-27 07:01:25,603 | INFO     | sum of square deviations: 2536890479721.6143
[2025-11-27 02:02:00] 2025-11-27 07:01:25,743 | INFO     | sum of deviations: 5411907141173.477
[2025-11-27 02:02:00] 2025-11-27 07:01:25,743 | INFO     | mean x: 1764165412.4918115
[2025-11-27 02:02:00] 2025-11-27 07:01:25,743 | INFO     | mean y: 2971232.059057072
[2025-11-27 02:02:00] 2025-11-27 07:01:25,743 | INFO     | intersect: -3760494108.8347216
[2025-11-27 02:02:00] 2025-11-27 07:01:25,750 | INFO     | chi2: 15.31864229534355
[2025-11-27 02:02:00] 2025-11-27 07:01:25,750 | INFO     | current chi2=15.31864229534355 (change=13.464813481738386 %)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,750 | INFO     | left removable region: 10
[2025-11-27 02:02:00] 2025-11-27 07:01:25,752 | INFO     | sum of square deviations: 2495572982957.988
[2025-11-27 02:02:00] 2025-11-27 07:01:25,851 | INFO     | sum of deviations: 6016289021325.204
[2025-11-27 02:02:00] 2025-11-27 07:01:25,852 | INFO     | mean x: 1764165381.998004
[2025-11-27 02:02:00] 2025-11-27 07:01:25,852 | INFO     | mean y: 2979391.0553892218
[2025-11-27 02:02:00] 2025-11-27 07:01:25,852 | INFO     | intersect: -4250043418.5344896
[2025-11-27 02:02:00] 2025-11-27 07:01:25,863 | INFO     | chi2: 11.559644163794198
[2025-11-27 02:02:00] 2025-11-27 07:01:25,864 | INFO     | current memory leak: 2.41 B/s (using 2004 data points, chi2=11.56)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,875 | INFO     | could have reported an average CPU frequency of 2765 MHz (71 samples)
[2025-11-27 02:02:00] 2025-11-27 07:01:25,875 | INFO     | ..............................
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . Timing measurements:
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . get job = 0 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . initial setup = 2 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . payload setup = 11 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . stage-in = 0 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . payload execution = 123193 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . stage-out = 10 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | . log creation = 5 s
[2025-11-27 02:02:00] 2025-11-27 07:01:25,876 | INFO     | ..............................
[2025-11-27 02:02:00] 2025-11-27 07:01:26,210 | INFO     | 
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | job summary report
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | --------------------------------------------------
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | PanDA job id: 6895368154
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | task id: 47556137
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | errors: (none)
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | pilot state: finished 
[2025-11-27 02:02:00] 2025-11-27 07:01:26,211 | INFO     | transexitcode: 0
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | exeerrorcode: 0
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | exeerrordiag: 
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | exitcode: 0
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | exitmsg: OK
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | cpuconsumptiontime: 248507 s
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | nevents: 1000
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | neventsw: 0
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | pid: 1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | pgrp: 1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | corecount: 8
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | event service: False
[2025-11-27 02:02:00] 2025-11-27 07:01:26,212 | INFO     | sizes: {0: 2284143, 1: 2284342, 7: 2284604, 11: 2284632, 123209: 2365715, 123220: 2374893, 123234: 2375083}
[2025-11-27 02:02:00] 2025-11-27 07:01:26,213 | INFO     | --------------------------------------------------
[2025-11-27 02:02:00] 2025-11-27 07:01:26,213 | INFO     | 
[2025-11-27 02:02:00] 2025-11-27 07:01:26,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 02:02:00] 2025-11-27 07:01:26,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:02:00] 2025-11-27 07:01:26,332 | INFO     | job 6895368154 has completed (purged errors)
[2025-11-27 02:02:00] 2025-11-27 07:01:26,333 | INFO     | overall cleanup function is called
[2025-11-27 02:02:00] 2025-11-27 07:01:27,358 | INFO     | --- collectZombieJob: --- 10, [1548671]
[2025-11-27 02:02:00] 2025-11-27 07:01:27,359 | INFO     | zombie collector waiting for pid 1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:27,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:02:00] 2025-11-27 07:01:27,359 | INFO     | collected zombie processes
[2025-11-27 02:02:00] 2025-11-27 07:01:27,359 | INFO     | will attempt to kill all subprocesses of pid=1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:27,775 | INFO     | process IDs to be killed: [1548671] (in reverse order)
[2025-11-27 02:02:00] 2025-11-27 07:01:28,333 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:02:00] 2025-11-27 07:01:28,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:02:00] 2025-11-27 07:01:28,368 | INFO     | did not find any defunct processes belonging to 1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:28,395 | INFO     | did not find any defunct processes belonging to 1548671
[2025-11-27 02:02:00] 2025-11-27 07:01:28,405 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:02:00] 2025-11-27 07:01:28,406 | INFO     | ready for new job
[2025-11-27 02:02:00] 2025-11-27 07:01:28,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:02:00] 2025-11-27 07:01:28,425 | INFO     | ***************************************
[2025-11-27 02:02:00] 2025-11-27 07:01:28,425 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:02:00] 2025-11-27 07:01:28,425 | INFO     | ***************************************
[2025-11-27 02:02:00] 2025-11-27 07:01:28,425 | INFO     | 
[2025-11-27 02:02:00] 2025-11-27 07:01:28,435 | INFO     | architecture information:
[2025-11-27 02:02:00] 2025-11-27 07:01:28,436 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:02:00] 2025-11-27 07:01:28,498 | INFO     | cat /etc/os-release:
[2025-11-27 02:02:00] NAME="CentOS Linux"
[2025-11-27 02:02:00] VERSION="7 (Core)"
[2025-11-27 02:02:00] ID="centos"
[2025-11-27 02:02:00] ID_LIKE="rhel fedora"
[2025-11-27 02:02:00] VERSION_ID="7"
[2025-11-27 02:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:02:00] ANSI_COLOR="0;31"
[2025-11-27 02:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:02:00] HOME_URL="https://www.centos.org/"
[2025-11-27 02:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:02:00] 
[2025-11-27 02:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:02:00] 
[2025-11-27 02:02:00] 2025-11-27 07:01:28,499 | INFO     | ***************************************
[2025-11-27 02:02:00] 2025-11-27 07:01:29,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 02:02:00] 2025-11-27 07:01:29,048 | INFO     | sufficient remaining disk space (65780318208 B)
[2025-11-27 02:02:00] 2025-11-27 07:01:29,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:02:00] 2025-11-27 07:01:29,048 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:02:00] 2025-11-27 07:01:29,048 | INFO     | update_server=False
[2025-11-27 02:02:00] 2025-11-27 07:01:29,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:02:00] 2025-11-27 07:01:29,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:02:00] 2025-11-27 07:01:29,050 | INFO     | aborting loop
[2025-11-27 02:02:00] 2025-11-27 07:01:29,313 | INFO     | all data control threads have been joined
[2025-11-27 02:02:00] 2025-11-27 07:01:29,380 | INFO     | all job control threads have been joined
[2025-11-27 02:02:00] 2025-11-27 07:01:29,691 | INFO     | all payload control threads have been joined
[2025-11-27 02:02:00] 2025-11-27 07:01:29,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:02:00] 2025-11-27 07:01:30,055 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,056 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,172 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,306 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,319 | INFO     | [data] control thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,387 | INFO     | [job] control thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,604 | INFO     | [job] validate thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,668 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,697 | INFO     | [payload] control thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:30,851 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:31,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:31,138 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:31,201 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:31,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:02:00] 2025-11-27 07:01:31,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:02:00] 2025-11-27 07:01:31,863 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:32,232 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:35,761 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:02:00] 2025-11-27 07:01:53,958 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:02:00] 2025-11-27 07:01:55,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641312110400)>', '<ExcThread(monitor, started 139640518469376)>']
[2025-11-27 02:02:00] 2025-11-27 07:01:58,430 | INFO     | PID=1529361 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:02:00] 2025-11-27 07:01:58,430 | INFO     | .. there are 13 such processes running
[2025-11-27 02:02:00] 2025-11-27 07:01:58,431 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:02:00] 2025-11-27 07:01:58,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:02:00] 2025-11-27 07:01:58,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:02:00] 2025-11-27 07:01:58,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:02:00] 2025-11-27 07:01:58,431 | INFO     | [monitor] control thread has ended
[2025-11-27 02:02:00] 2025-11-27 07:02:00,129 | INFO     | all workflow threads have been joined
[2025-11-27 02:02:00] 2025-11-27 07:02:00,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:02:00] 2025-11-27 07:02:00,130 | INFO     | traces error code: 0
[2025-11-27 02:02:00] 2025-11-27 07:02:00,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:02:00] 2025-11-27 07:02:00,391 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:02:00] 2025-11-27 07:02:00,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:02:00] 2025-11-27 07:02:00,398 [wrapper] pilotpid: 1529361
[2025-11-27 02:02:00] 2025-11-27 07:02:00,402 [wrapper] Pilot exit status: 0
[2025-11-27 02:02:00] 2025-11-27 07:02:00,435 [wrapper] pandaids: 6895368154 6895368154
[2025-11-27 02:02:00] 2025-11-27 07:02:00,502 [wrapper] cleanup supervisor_pilot 1673566 1529362
[2025-11-27 02:02:00] 2025-11-27 07:02:00,506 [wrapper] Test setup, not cleaning
[2025-11-27 02:02:00] 2025-11-27 07:02:00,511 [wrapper] apfmon messages muted
[2025-11-27 02:02:00] 2025-11-27 07:02:00,515 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:02:00] 2025-11-27 07:02:00,520 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:02:00]  *** Error codes and diagnostics ***
[2025-11-27 02:02:00]     "exeErrorCode": 0,
[2025-11-27 02:02:00]     "exeErrorDiag": "",
[2025-11-27 02:02:00]     "pilotErrorCode": 0,
[2025-11-27 02:02:00]     "pilotErrorDiag": "",
[2025-11-27 02:02:00]  *** Listing of results directory ***
[2025-11-27 02:02:00] total 1730960
[2025-11-27 02:02:00] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 14:15 pilot3.tar.gz
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:30 queuedata.json
[2025-11-27 02:02:00] -rwx------. 1 boincer umatlas     36292 Nov 23 14:31 runpilot2-wrapper.sh
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas       100 Nov 24 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:02:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 16:35 run_atlas
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas       105 Nov 24 16:35 job.xml
[2025-11-27 02:02:00] -rw-r--r--. 3 boincer umatlas 410365298 Nov 24 16:35 EVNT.47483658._000867.pool.root.1
[2025-11-27 02:02:00] -rw-r--r--. 3 boincer umatlas 410365298 Nov 24 16:35 ATLAS.root_0
[2025-11-27 02:02:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 16:35 shared
[2025-11-27 02:02:00] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 16:35 input.tar.gz
[2025-11-27 02:02:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 16:35 start_atlas.sh
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas         0 Nov 24 16:35 boinc_lockfile
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 15:46 pandaJob.out
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas        57 Nov 25 15:46 setup.sh.local
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas    991893 Nov 25 15:47 agis_schedconf.cvmfs.json
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas       534 Nov 27 01:26 boinc_task_state.xml
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas 910713014 Nov 27 01:59 HITS.47556137._008537.pool.root.1
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas      1070 Nov 27 02:00 memory_monitor_summary.json
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas        96 Nov 27 02:01 pilot_heartbeat.json
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas   2875656 Nov 27 02:01 log.47556137._008537.job.log.tgz.1
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas      7989 Nov 27 02:01 heartbeat.json
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 02:01 init_data.xml
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:01 boinc_mmap_file
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas        30 Nov 27 02:01 wrapper_checkpoint.txt
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas      4824 Nov 27 02:02 pilotlog.txt
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas  15690091 Nov 27 02:02 log.47556137._008537.job.log.1
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas       353 Nov 27 02:02 output.list
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:02 runtime_log
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas  18585600 Nov 27 02:02 result.tar.gz
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas      9439 Nov 27 02:02 runtime_log.err
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas       794 Nov 27 02:02 c1ZNDmiyUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJ9KKDmYd8Dim.diag
[2025-11-27 02:02:00] -rw-r--r--. 1 boincer umatlas     24020 Nov 27 02:02 stderr.txt
[2025-11-27 02:02:00] HITS file was successfully produced:
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas 910713014 Nov 27 01:59 shared/HITS.pool.root.1
[2025-11-27 02:02:00]  *** Contents of shared directory: ***
[2025-11-27 02:02:00] total 1308876
[2025-11-27 02:02:00] -rw-r--r--. 3 boincer umatlas 410365298 Nov 24 16:35 ATLAS.root_0
[2025-11-27 02:02:00] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 16:35 input.tar.gz
[2025-11-27 02:02:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 16:35 start_atlas.sh
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas 910713014 Nov 27 01:59 HITS.pool.root.1
[2025-11-27 02:02:00] -rw-------. 1 boincer umatlas  18585600 Nov 27 02:02 result.tar.gz
02:02:02 (1518132): run_atlas exited; CPU time 250431.892341
02:02:02 (1518132): called boinc_finish(0)

</stderr_txt>
]]>

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