Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:14 (3556061): wrapper (7.7.26015): starting
09:32:14 (3556061): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:32:14] Arguments: --nthreads 8
[2025-11-24 09:32:14] Threads: 8
[2025-11-24 09:32:14] Checking for CVMFS
[2025-11-24 09:32:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:32:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:32:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:32:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:32:15] 2.11.3.0 2884895 25808 223188 153254 3 393 23706163 45568000 6805 130560 0 165015294 99.777 106632560 19365 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-24 09:32:15] CVMFS is ok
[2025-11-24 09:32:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:32:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:32:15] Further information can be found at the LHC@home message board.
[2025-11-24 09:32:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:32:15] Checking for apptainer binary...
[2025-11-24 09:32:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:32:15] Running /usr/bin/apptainer --version
[2025-11-24 09:32:15] apptainer version 1.4.1-1.el9
[2025-11-24 09:32:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:32:15] wns0017.triumf.lcg
[2025-11-24 09:32:15] apptainer works
[2025-11-24 09:32:15] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:32:15] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:32:15] Starting ATLAS job with PandaID=6895386726
[2025-11-24 09:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:36:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | wrong length of table data, x=[1764005580.0, 1764005641.0], y=[1215.0, 607685.0] (must be same and length>=4)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | . Timing measurements:
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . get job = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . initial setup = 2 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload setup = 8 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-in = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload execution = 84 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-out = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . log creation = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386726/pilotlog.txt
[2025-11-24 09:36:57] 2025-11-24 17:36:23,605 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 09:36:57] - Log from pilotlog.txt -
[2025-11-24 09:36:57] 2025-11-24 17:36:23,591 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895386726/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | INFO     | extracted standard info from prmon json
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | wrong length of table data, x=[1764005580.0, 1764005641.0], y=[1215.0, 607685.0] (must be same and length>=4)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | . Timing measurements:
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . get job = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . initial setup = 2 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload setup = 8 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-in = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload execution = 84 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-out = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . log creation = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386726/pilotlog.txt
[2025-11-24 09:36:57] 2025-11-24 17:36:23,605 | WARNING  | 
[2025-11-24 09:36:57] [begin log extracts]
[2025-11-24 09:36:57] - Log from pilotlog.txt -
[2025-11-24 09:36:57] 2025-11-24 17:36:23,591 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895386726/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | INFO     | extracted standard info from prmon json
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 09:36:57] 2025-11-24 17:36:23,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 09:36:57] 2025-11-24 17:36:23,593 | WARNING  | wrong length of table data, x=[1764005580.0, 1764005641.0], y=[1215.0, 607685.0] (must be same and length>=4)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,594 | INFO     | . Timing measurements:
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . get job = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . initial setup = 2 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload setup = 8 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-in = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . payload execution = 84 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . stage-out = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | . log creation = 0 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | ..............................
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 09:36:57] 2025-11-24 17:36:23,595 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386726/pilotlog.txt
[2025-11-24 09:36:57] [end log extracts]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,605 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,606 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 09:36:57] 2025-11-24 17:36:23,863 | INFO     | 
[2025-11-24 09:36:57] 2025-11-24 17:36:23,863 | INFO     | job summary report
[2025-11-24 09:36:57] 2025-11-24 17:36:23,863 | INFO     | --------------------------------------------------
[2025-11-24 09:36:57] 2025-11-24 17:36:23,863 | INFO     | PanDA job id: 6895386726
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | task id: 47556149
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 09:34:13,090 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | pilot state: failed 
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | transexitcode: 65
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | exeerrorcode: 65
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | exitcode: 65
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | cpuconsumptiontime: 54 s
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | nevents: 0
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | neventsw: 0
[2025-11-24 09:36:57] 2025-11-24 17:36:23,864 | INFO     | pid: 3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | pgrp: 3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | corecount: 8
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | event service: False
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | sizes: {0: 2284029, 1: 2284284, 6: 2284546, 12: 2284574, 96: 2309966, 97: 2314256, 98: 2314412, 219: 2314578}
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | --------------------------------------------------
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | 
[2025-11-24 09:36:57] 2025-11-24 17:36:23,865 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 09:36:57] 2025-11-24 17:36:23,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 09:36:57] 2025-11-24 17:36:23,882 | INFO     | job 6895386726 has completed (purged errors)
[2025-11-24 09:36:57] 2025-11-24 17:36:23,883 | INFO     | overall cleanup function is called
[2025-11-24 09:36:57] 2025-11-24 17:36:24,891 | INFO     | --- collectZombieJob: --- 10, [3572642]
[2025-11-24 09:36:57] 2025-11-24 17:36:24,891 | INFO     | zombie collector waiting for pid 3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:24,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 09:36:57] 2025-11-24 17:36:24,892 | INFO     | collected zombie processes
[2025-11-24 09:36:57] 2025-11-24 17:36:24,892 | INFO     | will attempt to kill all subprocesses of pid=3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:25,283 | INFO     | process IDs to be killed: [3572642] (in reverse order)
[2025-11-24 09:36:57] 2025-11-24 17:36:25,333 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 09:36:57] 2025-11-24 17:36:25,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 09:36:57] 2025-11-24 17:36:25,339 | INFO     | did not find any defunct processes belonging to 3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:25,345 | INFO     | did not find any defunct processes belonging to 3572642
[2025-11-24 09:36:57] 2025-11-24 17:36:25,345 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 09:36:57] 2025-11-24 17:36:25,346 | INFO     | ready for new job
[2025-11-24 09:36:57] 2025-11-24 17:36:25,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 09:36:57] 2025-11-24 17:36:25,347 | INFO     | ***************************************
[2025-11-24 09:36:57] 2025-11-24 17:36:25,348 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 09:36:57] 2025-11-24 17:36:25,348 | INFO     | ***************************************
[2025-11-24 09:36:57] 2025-11-24 17:36:25,348 | INFO     | 
[2025-11-24 09:36:57] 2025-11-24 17:36:25,349 | INFO     | architecture information:
[2025-11-24 09:36:57] 2025-11-24 17:36:25,350 | INFO     | executing command: cat /etc/os-release
[2025-11-24 09:36:57] 2025-11-24 17:36:25,361 | INFO     | cat /etc/os-release:
[2025-11-24 09:36:57] NAME="CentOS Linux"
[2025-11-24 09:36:57] VERSION="7 (Core)"
[2025-11-24 09:36:57] ID="centos"
[2025-11-24 09:36:57] ID_LIKE="rhel fedora"
[2025-11-24 09:36:57] VERSION_ID="7"
[2025-11-24 09:36:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 09:36:57] ANSI_COLOR="0;31"
[2025-11-24 09:36:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 09:36:57] HOME_URL="https://www.centos.org/"
[2025-11-24 09:36:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 09:36:57] 
[2025-11-24 09:36:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 09:36:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 09:36:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 09:36:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 09:36:57] 
[2025-11-24 09:36:57] 2025-11-24 17:36:25,362 | INFO     | ***************************************
[2025-11-24 09:36:57] 2025-11-24 17:36:25,865 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 09:36:57] 2025-11-24 17:36:25,879 | INFO     | sufficient remaining disk space (1277059661824 B)
[2025-11-24 09:36:57] 2025-11-24 17:36:25,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:36:57] 2025-11-24 17:36:25,880 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:36:57] 2025-11-24 17:36:25,880 | INFO     | update_server=False
[2025-11-24 09:36:57] 2025-11-24 17:36:25,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:36:57] 2025-11-24 17:36:25,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:36:57] 2025-11-24 17:36:25,888 | INFO     | all data control threads have been joined
[2025-11-24 09:36:57] 2025-11-24 17:36:26,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:36:57] 2025-11-24 17:36:26,368 | INFO     | aborting loop
[2025-11-24 09:36:57] 2025-11-24 17:36:26,452 | INFO     | all payload control threads have been joined
[2025-11-24 09:36:57] 2025-11-24 17:36:26,887 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:26,906 | INFO     | [data] control thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:26,977 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,287 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,322 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:36:57] 2025-11-24 17:36:27,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:36:57] 2025-11-24 17:36:27,374 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,458 | INFO     | [payload] control thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,522 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:27,566 | INFO     | all job control threads have been joined
[2025-11-24 09:36:57] 2025-11-24 17:36:27,901 | INFO     | [job] validate thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:28,008 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:28,069 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:28,322 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:28,573 | INFO     | [job] control thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:28,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:36:57] 2025-11-24 17:36:29,336 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:29,702 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:29,892 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:36:57] 2025-11-24 17:36:31,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524373411648)>', '<ExcThread(monitor, started 140523612403456)>']
[2025-11-24 09:36:57] 2025-11-24 17:36:36,914 | INFO     | all workflow threads have been joined
[2025-11-24 09:36:57] 2025-11-24 17:36:36,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:36:57] 2025-11-24 17:36:36,915 | INFO     | traces error code: 0
[2025-11-24 09:36:57] 2025-11-24 17:36:36,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:36:57] 2025-11-24 17:36:56,778 | INFO     | PID=3559704 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 09:36:57] 2025-11-24 17:36:56,779 | INFO     | .. there are 12 such processes running
[2025-11-24 09:36:57] 2025-11-24 17:36:56,779 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:36:57] 2025-11-24 17:36:56,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:36:57] 2025-11-24 17:36:56,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:36:57] 2025-11-24 17:36:56,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:36:57] 2025-11-24 17:36:56,780 | INFO     | [monitor] control thread has ended
[2025-11-24 09:36:57] 2025-11-24 17:36:57,164 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:36:57] 2025-11-24 17:36:57,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:36:57] 2025-11-24 17:36:57,190 [wrapper] pilotpid: 3559704
[2025-11-24 09:36:57] 2025-11-24 17:36:57,193 [wrapper] Pilot exit status: 0
[2025-11-24 09:36:57] 2025-11-24 17:36:57,229 [wrapper] pandaids: 6895386726
[2025-11-24 09:36:57] 2025-11-24 17:36:57,260 [wrapper] cleanup supervisor_pilot 3559710 3559705
[2025-11-24 09:36:57] 2025-11-24 17:36:57,262 [wrapper] Test setup, not cleaning
[2025-11-24 09:36:57] 2025-11-24 17:36:57,264 [wrapper] apfmon messages muted
[2025-11-24 09:36:57] 2025-11-24 17:36:57,266 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:36:57] 2025-11-24 17:36:57,268 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:36:57]  *** Error codes and diagnostics ***
[2025-11-24 09:36:57]     "exeErrorCode": 65,
[2025-11-24 09:36:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 09:36:57]     "pilotErrorCode": 1305,
[2025-11-24 09:36:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 09:36:57]  *** Listing of results directory ***
[2025-11-24 09:36:57] total 403936
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc    576529 Nov 23 21:37 pilot3.tar.gz
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc      5112 Nov 23 21:52 queuedata.json
[2025-11-24 09:36:57] -rwx------. 1 boinc boinc     36292 Nov 23 21:53 runpilot2-wrapper.sh
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc       100 Nov 24 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:36:57] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 09:32 run_atlas
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc       105 Nov 24 09:32 job.xml
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc 409435273 Nov 24 09:32 EVNT.47483658._001252.pool.root.1
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc      6445 Nov 24 09:32 init_data.xml
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 09:32 start_atlas.sh
[2025-11-24 09:36:57] drwxrwx--x. 2 boinc boinc      4096 Nov 24 09:32 shared
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc    590109 Nov 24 09:32 input.tar.gz
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc         0 Nov 24 09:32 boinc_lockfile
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc      2785 Nov 24 09:32 pandaJob.out
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc    991801 Nov 24 09:32 agis_schedconf.cvmfs.json
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc   1516227 Nov 24 09:32 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:36:57] drwx------. 5 boinc boinc      4096 Nov 24 09:32 pilot3
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc       524 Nov 24 09:34 boinc_task_state.xml
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc       985 Nov 24 09:34 memory_monitor_summary.json
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc     48789 Nov 24 09:34 log.47556149._002386.job.log.tgz.1
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc     10328 Nov 24 09:36 heartbeat.json
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc        23 Nov 24 09:36 wrapper_checkpoint.txt
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc       823 Nov 24 09:36 pilotlog.txt
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc        95 Nov 24 09:36 pilot_heartbeat.json
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc      8192 Nov 24 09:36 boinc_mmap_file
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc     96863 Nov 24 09:36 log.47556149._002386.job.log.1
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc       186 Nov 24 09:36 output.list
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc       620 Nov 24 09:36 runtime_log
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc    163840 Nov 24 09:36 result.tar.gz
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc      8634 Nov 24 09:36 runtime_log.err
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc       645 Nov 24 09:36 mC3KDmygeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwwIKDm3iQ5bm.diag
[2025-11-24 09:36:57] -rw-r--r--. 1 boinc boinc     22471 Nov 24 09:36 stderr.txt
[2025-11-24 09:36:57] No HITS result produced
[2025-11-24 09:36:57]  *** Contents of shared directory: ***
[2025-11-24 09:36:57] total 400600
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc 409435273 Nov 24 09:32 ATLAS.root_0
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 09:32 start_atlas.sh
[2025-11-24 09:36:57] -rw-r--r--. 2 boinc boinc    590109 Nov 24 09:32 input.tar.gz
[2025-11-24 09:36:57] -rw-------. 1 boinc boinc    163840 Nov 24 09:36 result.tar.gz
09:36:59 (3556061): run_atlas exited; CPU time 53.369756
09:36:59 (3556061): called boinc_finish(0)

</stderr_txt>
]]>

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