Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:47 (15456): wrapper (7.7.26015): starting
12:22:47 (15456): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 12:22:47] Arguments: --nthreads 8
[2025-11-24 12:22:47] Threads: 8
[2025-11-24 12:22:47] Checking for CVMFS
[2025-11-24 12:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:22:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:22:47] 2.11.2.0 2822 70713 85052 153254 0 80 16089625 20275200 1 130560 0 19852188 99.865 4147445 31738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 12:22:47] CVMFS is ok
[2025-11-24 12:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:22:47] Further information can be found at the LHC@home message board.
[2025-11-24 12:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:22:47] Checking for apptainer binary...
[2025-11-24 12:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:22:47] Running /usr/bin/apptainer --version
[2025-11-24 12:22:47] apptainer version 1.3.2-1.el7
[2025-11-24 12:22:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:22:49] c-204-37.aglt2.org
[2025-11-24 12:22:49] apptainer works
[2025-11-24 12:22:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 12:22:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 12:22:49] Starting ATLAS job with PandaID=6895356990
[2025-11-24 12:22:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:49:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:49:43] 2025-11-25 05:49:08,965 | INFO     | monitor loop #3248: job 0:6895356990 is in state 'finished'
[2025-11-25 00:49:43] 2025-11-25 05:49:08,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:49:43] 2025-11-25 05:49:10,192 | INFO     | time since job start (44763s) is within the limit (172800.0s)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,120 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 00:49:43] 2025-11-25 05:49:11,123 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-25 00:49:43] 2025-11-25 05:49:11,125 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895356990/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,126 | INFO     | extracted standard info from prmon json
[2025-11-25 00:49:43] 2025-11-25 05:49:11,126 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:49:43] 2025-11-25 05:49:11,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:49:43] 2025-11-25 05:49:11,138 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:49:43] 2025-11-25 05:49:11,139 | INFO     | sum of square deviations: 122621135506.37596
[2025-11-25 00:49:43] 2025-11-25 05:49:11,151 | INFO     | sum of deviations: 663143050996.5374
[2025-11-25 00:49:43] 2025-11-25 05:49:11,151 | INFO     | mean x: 1764027376.1362398
[2025-11-25 00:49:43] 2025-11-25 05:49:11,151 | INFO     | mean y: 2867643.4046321525
[2025-11-25 00:49:43] 2025-11-25 05:49:11,151 | INFO     | intersect: -9537106777.983562
[2025-11-25 00:49:43] 2025-11-25 05:49:11,152 | INFO     | chi2: 6.680931308653673
[2025-11-25 00:49:43] 2025-11-25 05:49:11,153 | INFO     | sum of square deviations: 120132421971.83836
[2025-11-25 00:49:43] 2025-11-25 05:49:11,164 | INFO     | sum of deviations: 929086348959.913
[2025-11-25 00:49:43] 2025-11-25 05:49:11,164 | INFO     | mean x: 1764027223.6406035
[2025-11-25 00:49:43] 2025-11-25 05:49:11,165 | INFO     | mean y: 2883940.381344307
[2025-11-25 00:49:43] 2025-11-25 05:49:11,165 | INFO     | intersect: -13639841193.907064
[2025-11-25 00:49:43] 2025-11-25 05:49:11,165 | INFO     | chi2: 3.0505877465049043
[2025-11-25 00:49:43] 2025-11-25 05:49:11,166 | INFO     | current chi2=3.0505877465049043 (change=54.33888472175218 %)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,166 | INFO     | sum of square deviations: 117677616049.77194
[2025-11-25 00:49:43] 2025-11-25 05:49:11,177 | INFO     | sum of deviations: 1018676193727.9501
[2025-11-25 00:49:43] 2025-11-25 05:49:11,178 | INFO     | mean x: 1764027071.1450276
[2025-11-25 00:49:43] 2025-11-25 05:49:11,178 | INFO     | mean y: 2889496.3052486186
[2025-11-25 00:49:43] 2025-11-25 05:49:11,178 | INFO     | intersect: -15267409501.824083
[2025-11-25 00:49:43] 2025-11-25 05:49:11,179 | INFO     | chi2: 2.455012009260836
[2025-11-25 00:49:43] 2025-11-25 05:49:11,179 | INFO     | current chi2=2.455012009260836 (change=19.52331113656464 %)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,179 | INFO     | right removable region: 723
[2025-11-25 00:49:43] 2025-11-25 05:49:11,180 | INFO     | sum of square deviations: 120132181632.11789
[2025-11-25 00:49:43] 2025-11-25 05:49:11,191 | INFO     | sum of deviations: 463308092140.4925
[2025-11-25 00:49:43] 2025-11-25 05:49:11,191 | INFO     | mean x: 1764027528.639232
[2025-11-25 00:49:43] 2025-11-25 05:49:11,192 | INFO     | mean y: 2879865.807956104
[2025-11-25 00:49:43] 2025-11-25 05:49:11,192 | INFO     | intersect: -6800361511.094208
[2025-11-25 00:49:43] 2025-11-25 05:49:11,193 | INFO     | chi2: 4.393200076557745
[2025-11-25 00:49:43] 2025-11-25 05:49:11,193 | INFO     | current chi2=4.393200076557745 (change=34.24269950407477 %)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,193 | INFO     | sum of square deviations: 117677224796.9102
[2025-11-25 00:49:43] 2025-11-25 05:49:11,205 | INFO     | sum of deviations: 421418073592.10596
[2025-11-25 00:49:43] 2025-11-25 05:49:11,205 | INFO     | mean x: 1764027681.1395028
[2025-11-25 00:49:43] 2025-11-25 05:49:11,205 | INFO     | mean y: 2882466.57320442
[2025-11-25 00:49:43] 2025-11-25 05:49:11,205 | INFO     | intersect: -6314339480.425651
[2025-11-25 00:49:43] 2025-11-25 05:49:11,206 | INFO     | chi2: 4.347386620894235
[2025-11-25 00:49:43] 2025-11-25 05:49:11,206 | INFO     | current chi2=4.347386620894235 (change=1.042826524290856 %)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,206 | INFO     | left removable region: 20
[2025-11-25 00:49:43] 2025-11-25 05:49:11,207 | INFO     | sum of square deviations: 107731708539.6158
[2025-11-25 00:49:43] 2025-11-25 05:49:11,217 | INFO     | sum of deviations: 726388177434.3969
[2025-11-25 00:49:43] 2025-11-25 05:49:11,217 | INFO     | mean x: 1764027650.6514935
[2025-11-25 00:49:43] 2025-11-25 05:49:11,217 | INFO     | mean y: 2908234.1934566144
[2025-11-25 00:49:43] 2025-11-25 05:49:11,218 | INFO     | intersect: -11891164991.512661
[2025-11-25 00:49:43] 2025-11-25 05:49:11,218 | INFO     | chi2: 0.0699875768214599
[2025-11-25 00:49:43] 2025-11-25 05:49:11,219 | INFO     | current memory leak: 6.74 B/s (using 703 data points, chi2=0.07)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,219 | INFO     | could have reported an average CPU frequency of 2166 MHz (28 samples)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | ..............................
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . Timing measurements:
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . get job = 0 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . initial setup = 2 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . payload setup = 9 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . stage-in = 0 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . payload execution = 44723 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,220 | INFO     | . stage-out = 4 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,221 | INFO     | . log creation = 0 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,221 | INFO     | ..............................
[2025-11-25 00:49:43] 2025-11-25 05:49:11,310 | INFO     | 
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | job summary report
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | --------------------------------------------------
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | PanDA job id: 6895356990
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | task id: 47556137
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | errors: (none)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | pilot state: finished 
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | transexitcode: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | exeerrorcode: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | exeerrordiag: 
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | exitcode: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:11,312 | INFO     | exitmsg: OK
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | cpuconsumptiontime: 348037 s
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | nevents: 1000
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | neventsw: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | pid: 25540
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | pgrp: 25540
[2025-11-25 00:49:43] 2025-11-25 05:49:11,313 | INFO     | corecount: 8
[2025-11-25 00:49:43] 2025-11-25 05:49:11,314 | INFO     | event service: False
[2025-11-25 00:49:43] 2025-11-25 05:49:11,314 | INFO     | sizes: {0: 2284139, 1: 2284338, 7: 2284600, 11: 2284628, 44736: 2330358, 44740: 2339352, 44741: 2339564, 44747: 2339810}
[2025-11-25 00:49:43] 2025-11-25 05:49:11,314 | INFO     | --------------------------------------------------
[2025-11-25 00:49:43] 2025-11-25 05:49:11,314 | INFO     | 
[2025-11-25 00:49:43] 2025-11-25 05:49:11,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 00:49:43] 2025-11-25 05:49:11,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:49:43] 2025-11-25 05:49:11,347 | INFO     | job 6895356990 has completed (purged errors)
[2025-11-25 00:49:43] 2025-11-25 05:49:11,347 | INFO     | overall cleanup function is called
[2025-11-25 00:49:43] 2025-11-25 05:49:12,363 | INFO     | --- collectZombieJob: --- 10, [25540]
[2025-11-25 00:49:43] 2025-11-25 05:49:12,363 | INFO     | zombie collector waiting for pid 25540
[2025-11-25 00:49:43] 2025-11-25 05:49:12,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:49:43] 2025-11-25 05:49:12,363 | INFO     | collected zombie processes
[2025-11-25 00:49:43] 2025-11-25 05:49:12,364 | INFO     | will attempt to kill all subprocesses of pid=25540
[2025-11-25 00:49:43] 2025-11-25 05:49:12,454 | INFO     | process IDs to be killed: [25540] (in reverse order)
[2025-11-25 00:49:43] 2025-11-25 05:49:12,516 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:49:43] 2025-11-25 05:49:12,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:49:43] 2025-11-25 05:49:12,520 | INFO     | did not find any defunct processes belonging to 25540
[2025-11-25 00:49:43] 2025-11-25 05:49:12,523 | INFO     | did not find any defunct processes belonging to 25540
[2025-11-25 00:49:43] 2025-11-25 05:49:12,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:49:43] 2025-11-25 05:49:12,526 | INFO     | ready for new job
[2025-11-25 00:49:43] 2025-11-25 05:49:12,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:49:43] 2025-11-25 05:49:12,530 | INFO     | ***************************************
[2025-11-25 00:49:43] 2025-11-25 05:49:12,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:49:43] 2025-11-25 05:49:12,530 | INFO     | ***************************************
[2025-11-25 00:49:43] 2025-11-25 05:49:12,530 | INFO     | 
[2025-11-25 00:49:43] 2025-11-25 05:49:12,531 | INFO     | architecture information:
[2025-11-25 00:49:43] 2025-11-25 05:49:12,531 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:49:43] 2025-11-25 05:49:12,550 | INFO     | cat /etc/os-release:
[2025-11-25 00:49:43] NAME="CentOS Linux"
[2025-11-25 00:49:43] VERSION="7 (Core)"
[2025-11-25 00:49:43] ID="centos"
[2025-11-25 00:49:43] ID_LIKE="rhel fedora"
[2025-11-25 00:49:43] VERSION_ID="7"
[2025-11-25 00:49:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:49:43] ANSI_COLOR="0;31"
[2025-11-25 00:49:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:49:43] HOME_URL="https://www.centos.org/"
[2025-11-25 00:49:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:49:43] 
[2025-11-25 00:49:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:49:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:49:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:49:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:49:43] 
[2025-11-25 00:49:43] 2025-11-25 05:49:12,550 | INFO     | ***************************************
[2025-11-25 00:49:43] 2025-11-25 05:49:13,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 00:49:43] 2025-11-25 05:49:13,075 | INFO     | sufficient remaining disk space (17438867456 B)
[2025-11-25 00:49:43] 2025-11-25 05:49:13,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:49:43] 2025-11-25 05:49:13,075 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:49:43] 2025-11-25 05:49:13,076 | INFO     | update_server=False
[2025-11-25 00:49:43] 2025-11-25 05:49:13,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:49:43] 2025-11-25 05:49:13,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:49:43] 2025-11-25 05:49:13,076 | INFO     | aborting loop
[2025-11-25 00:49:43] 2025-11-25 05:49:13,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:49:43] 2025-11-25 05:49:13,492 | INFO     | all job control threads have been joined
[2025-11-25 00:49:43] 2025-11-25 05:49:13,622 | INFO     | all payload control threads have been joined
[2025-11-25 00:49:43] 2025-11-25 05:49:14,081 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:14,082 | INFO     | all data control threads have been joined
[2025-11-25 00:49:43] 2025-11-25 05:49:14,082 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:14,083 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:14,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:49:43] 2025-11-25 05:49:14,383 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:14,964 | INFO     | [payload] control thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:14,965 | INFO     | [job] control thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,062 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,087 | INFO     | [data] control thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,159 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,164 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,188 | INFO     | [job] validate thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,196 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,572 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:15,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:49:43] 2025-11-25 05:49:16,281 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:19,790 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:20,714 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:49:43] 2025-11-25 05:49:24,123 | INFO     | job.realtimelogging is not enabled
[2025-11-25 00:49:43] 2025-11-25 05:49:25,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:49:43] 2025-11-25 05:49:26,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140656811456320)>', '<ExcThread(monitor, started 140655942690560)>']
[2025-11-25 00:49:43] 2025-11-25 05:49:31,095 | INFO     | all workflow threads have been joined
[2025-11-25 00:49:43] 2025-11-25 05:49:31,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:49:43] 2025-11-25 05:49:31,100 | INFO     | traces error code: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:31,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:49:43] 2025-11-25 05:49:43,407 | INFO     | PID=19179 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:49:43] 2025-11-25 05:49:43,408 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:49:43] 2025-11-25 05:49:43,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:49:43] 2025-11-25 05:49:43,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:49:43] 2025-11-25 05:49:43,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:49:43] 2025-11-25 05:49:43,408 | INFO     | [monitor] control thread has ended
[2025-11-25 00:49:43] 2025-11-25 05:49:43,512 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:49:43] 2025-11-25 05:49:43,517 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:49:43] 2025-11-25 05:49:43,521 [wrapper] pilotpid: 19179
[2025-11-25 00:49:43] 2025-11-25 05:49:43,526 [wrapper] Pilot exit status: 0
[2025-11-25 00:49:43] 2025-11-25 05:49:43,545 [wrapper] pandaids: 6895356990
[2025-11-25 00:49:43] 2025-11-25 05:49:43,588 [wrapper] cleanup supervisor_pilot 31769 19180
[2025-11-25 00:49:43] 2025-11-25 05:49:43,593 [wrapper] Test setup, not cleaning
[2025-11-25 00:49:43] 2025-11-25 05:49:43,598 [wrapper] apfmon messages muted
[2025-11-25 00:49:43] 2025-11-25 05:49:43,603 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:49:43] 2025-11-25 05:49:43,607 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:49:43]  *** Error codes and diagnostics ***
[2025-11-25 00:49:43]     "exeErrorCode": 0,
[2025-11-25 00:49:43]     "exeErrorDiag": "",
[2025-11-25 00:49:43]     "pilotErrorCode": 0,
[2025-11-25 00:49:43]     "pilotErrorDiag": "",
[2025-11-25 00:49:43]  *** Listing of results directory ***
[2025-11-25 00:49:43] total 1309356
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 06:44 pilot3.tar.gz
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 06:47 queuedata.json
[2025-11-25 00:49:43] -rwx------ 1 boincer umatlas     36292 Nov 23 06:48 runpilot2-wrapper.sh
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas       100 Nov 24 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:49:43] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 12:22 run_atlas
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas       105 Nov 24 12:22 job.xml
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas 409300245 Nov 24 12:22 EVNT.47483658._000714.pool.root.1
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 12:22 start_atlas.sh
[2025-11-25 00:49:43] drwxrwx--x 2 boincer umatlas      4096 Nov 24 12:22 shared
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 12:22 input.tar.gz
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas         0 Nov 24 12:22 boinc_lockfile
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 12:22 pandaJob.out
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas        57 Nov 24 12:22 setup.sh.local
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas    991801 Nov 24 12:23 agis_schedconf.cvmfs.json
[2025-11-25 00:49:43] drwx------ 5 boincer umatlas      4096 Nov 24 12:23 pilot3
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas       533 Nov 25 00:38 boinc_task_state.xml
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas      5912 Nov 25 00:45 init_data.xml
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas 911404929 Nov 25 00:48 HITS.47556137._007095.pool.root.1
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas      1064 Nov 25 00:48 memory_monitor_summary.json
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas   1516227 Nov 25 00:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas   1977448 Nov 25 00:49 log.47556137._007095.job.log.tgz.1
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas        95 Nov 25 00:49 pilot_heartbeat.json
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas      8661 Nov 25 00:49 heartbeat.json
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 00:49 boinc_mmap_file
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas        29 Nov 25 00:49 wrapper_checkpoint.txt
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas       745 Nov 25 00:49 pilotlog.txt
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas   6103455 Nov 25 00:49 log.47556137._007095.job.log.1
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas       353 Nov 25 00:49 output.list
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas       620 Nov 25 00:49 runtime_log
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas   8099840 Nov 25 00:49 result.tar.gz
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas       668 Nov 25 00:49 VFdMDmkkNh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSWIKDmc1WHSm.diag
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 00:49 runtime_log.err
[2025-11-25 00:49:43] -rw-r--r-- 1 boincer umatlas     21282 Nov 25 00:49 stderr.txt
[2025-11-25 00:49:43] HITS file was successfully produced:
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas 911404929 Nov 25 00:48 shared/HITS.pool.root.1
[2025-11-25 00:49:43]  *** Contents of shared directory: ***
[2025-11-25 00:49:43] total 1298264
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas 409300245 Nov 24 12:22 ATLAS.root_0
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 12:22 start_atlas.sh
[2025-11-25 00:49:43] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 12:22 input.tar.gz
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas 911404929 Nov 25 00:48 HITS.pool.root.1
[2025-11-25 00:49:43] -rw------- 1 boincer umatlas   8099840 Nov 25 00:49 result.tar.gz
00:49:45 (15456): run_atlas exited; CPU time 345261.895396
00:49:45 (15456): called boinc_finish(0)

</stderr_txt>
]]>

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