Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:44 (10633): wrapper (7.7.26015): starting
01:52:44 (10633): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:52:44] Arguments: --nthreads 8
[2025-11-27 01:52:44] Threads: 8
[2025-11-27 01:52:44] Checking for CVMFS
[2025-11-27 01:52:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:52:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:52:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:52:46] 2.11.2.0 28641 285968 155856 153341 0 85 13476782 25165825 1288 130560 227 126417731 99.876 75101184 2576 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 01:52:46] CVMFS is ok
[2025-11-27 01:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:52:46] Checking for apptainer binary...
[2025-11-27 01:52:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:52:46] Running /usr/bin/apptainer --version
[2025-11-27 01:52:46] apptainer version 1.3.2-1.el7
[2025-11-27 01:52:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:53:03] cg-vwn402.simple-grid.lan
[2025-11-27 01:53:03] apptainer works
[2025-11-27 01:53:03] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:53:03] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:53:03] Starting ATLAS job with PandaID=6895369087
[2025-11-27 01:53:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:39:43]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:39:43] 2025-11-27 23:38:39,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:39:43] 2025-11-27 23:38:40,374 | INFO     | time since job start (81750s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:42,147 | INFO     | monitor loop #5513: job 0:6895369087 is in state 'finished'
[2025-11-28 00:39:43] 2025-11-27 23:38:42,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:39:43] 2025-11-27 23:38:42,381 | INFO     | time since job start (81752s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:44,388 | INFO     | time since job start (81754s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:44,657 | INFO     | monitor loop #5514: job 0:6895369087 is in state 'finished'
[2025-11-28 00:39:43] 2025-11-27 23:38:44,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:39:43] 2025-11-27 23:38:46,400 | INFO     | time since job start (81756s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:47,172 | INFO     | monitor loop #5515: job 0:6895369087 is in state 'finished'
[2025-11-28 00:39:43] 2025-11-27 23:38:47,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:39:43] 2025-11-27 23:38:48,408 | INFO     | time since job start (81758s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:49,680 | INFO     | monitor loop #5516: job 0:6895369087 is in state 'finished'
[2025-11-28 00:39:43] 2025-11-27 23:38:49,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:39:43] 2025-11-27 23:38:50,416 | INFO     | time since job start (81760s) is within the limit (172800.0s)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:39:43] 2025-11-27 23:38:51,384 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 00:39:43] 2025-11-27 23:38:51,386 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6895369087/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,387 | INFO     | extracted standard info from prmon json
[2025-11-28 00:39:43] 2025-11-27 23:38:51,387 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:39:43] 2025-11-27 23:38:51,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:39:43] 2025-11-27 23:38:51,419 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:39:43] 2025-11-27 23:38:51,421 | INFO     | sum of square deviations: 731159731798.7275
[2025-11-28 00:39:43] 2025-11-27 23:38:51,486 | INFO     | sum of deviations: 2951718989387.9897
[2025-11-28 00:39:43] 2025-11-27 23:38:51,487 | INFO     | mean x: 1764246058.0495868
[2025-11-28 00:39:43] 2025-11-27 23:38:51,487 | INFO     | mean y: 2846243.969947408
[2025-11-28 00:39:43] 2025-11-27 23:38:51,487 | INFO     | intersect: -7119480608.859797
[2025-11-28 00:39:43] 2025-11-27 23:38:51,489 | INFO     | chi2: 19.57738557159206
[2025-11-28 00:39:43] 2025-11-27 23:38:51,491 | INFO     | sum of square deviations: 722951101635.6976
[2025-11-28 00:39:43] 2025-11-27 23:38:51,548 | INFO     | sum of deviations: 3412157353594.718
[2025-11-28 00:39:43] 2025-11-27 23:38:51,548 | INFO     | mean x: 1764245905.5535445
[2025-11-28 00:39:43] 2025-11-27 23:38:51,548 | INFO     | mean y: 2854795.5180995474
[2025-11-28 00:39:43] 2025-11-27 23:38:51,548 | INFO     | intersect: -8323966515.859304
[2025-11-28 00:39:43] 2025-11-27 23:38:51,550 | INFO     | chi2: 16.11133601416899
[2025-11-28 00:39:43] 2025-11-27 23:38:51,550 | INFO     | current chi2=16.11133601416899 (change=17.70435354990664 %)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,550 | INFO     | right removable region: 1325
[2025-11-28 00:39:43] 2025-11-27 23:38:51,552 | INFO     | sum of square deviations: 722950249465.6973
[2025-11-28 00:39:43] 2025-11-27 23:38:51,607 | INFO     | sum of deviations: 2396941004306.7974
[2025-11-28 00:39:43] 2025-11-27 23:38:51,607 | INFO     | mean x: 1764246210.5535445
[2025-11-28 00:39:43] 2025-11-27 23:38:51,607 | INFO     | mean y: 2856548.883107089
[2025-11-28 00:39:43] 2025-11-27 23:38:51,608 | INFO     | intersect: -5846500425.395555
[2025-11-28 00:39:43] 2025-11-27 23:38:51,609 | INFO     | chi2: 14.951514339064687
[2025-11-28 00:39:43] 2025-11-27 23:38:51,610 | INFO     | current chi2=14.951514339064687 (change=23.62864650957166 %)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,610 | INFO     | left removable region: 10
[2025-11-28 00:39:43] 2025-11-27 23:38:51,612 | INFO     | sum of square deviations: 705107181512.886
[2025-11-28 00:39:43] 2025-11-27 23:38:51,681 | INFO     | sum of deviations: 2477184353965.262
[2025-11-28 00:39:43] 2025-11-27 23:38:51,681 | INFO     | mean x: 1764246180.0623574
[2025-11-28 00:39:43] 2025-11-27 23:38:51,681 | INFO     | mean y: 2875900.4235741445
[2025-11-28 00:39:43] 2025-11-27 23:38:51,681 | INFO     | intersect: -6195278292.83872
[2025-11-28 00:39:43] 2025-11-27 23:38:51,683 | INFO     | chi2: 7.455157756277567
[2025-11-28 00:39:43] 2025-11-27 23:38:51,683 | INFO     | current memory leak: 3.51 B/s (using 1315 data points, chi2=7.46)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,684 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,685 | INFO     | ..............................
[2025-11-28 00:39:43] 2025-11-27 23:38:51,685 | INFO     | . Timing measurements:
[2025-11-28 00:39:43] 2025-11-27 23:38:51,685 | INFO     | . get job = 0 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,685 | INFO     | . initial setup = 2 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | . payload setup = 152 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | . stage-in = 0 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | . payload execution = 81297 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | . stage-out = 5 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | . log creation = 1 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,686 | INFO     | ..............................
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | 
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | job summary report
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | --------------------------------------------------
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | PanDA job id: 6895369087
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | task id: 47556149
[2025-11-28 00:39:43] 2025-11-27 23:38:51,807 | INFO     | errors: (none)
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | pilot state: finished 
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | transexitcode: 0
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | exeerrorcode: 0
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | exeerrordiag: 
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | exitcode: 0
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | exitmsg: OK
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | cpuconsumptiontime: 307651 s
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | nevents: 1000
[2025-11-28 00:39:43] 2025-11-27 23:38:51,808 | INFO     | neventsw: 0
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | pid: 20972
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | pgrp: 20972
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | corecount: 8
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | event service: False
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284365, 12: 2284365, 23: 2284393, 34: 2284421, 45: 2284577, 55: 2284605, 66: 2284633, 77: 2284661, 88: 2284717, 98: 2285025, 10
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | --------------------------------------------------
[2025-11-28 00:39:43] 2025-11-27 23:38:51,809 | INFO     | 
[2025-11-28 00:39:43] 2025-11-27 23:38:51,810 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-28 00:39:43] 2025-11-27 23:38:52,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:39:43] 2025-11-27 23:38:52,138 | INFO     | job 6895369087 has completed (purged errors)
[2025-11-28 00:39:43] 2025-11-27 23:38:52,138 | INFO     | overall cleanup function is called
[2025-11-28 00:39:43] 2025-11-27 23:38:53,159 | INFO     | --- collectZombieJob: --- 10, [20972]
[2025-11-28 00:39:43] 2025-11-27 23:38:53,159 | INFO     | zombie collector waiting for pid 20972
[2025-11-28 00:39:43] 2025-11-27 23:38:53,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:39:43] 2025-11-27 23:38:53,159 | INFO     | collected zombie processes
[2025-11-28 00:39:43] 2025-11-27 23:38:53,160 | INFO     | will attempt to kill all subprocesses of pid=20972
[2025-11-28 00:39:43] 2025-11-27 23:38:53,306 | INFO     | process IDs to be killed: [20972] (in reverse order)
[2025-11-28 00:39:43] 2025-11-27 23:38:54,150 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:39:43] 2025-11-27 23:38:54,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:39:43] 2025-11-27 23:38:54,160 | INFO     | did not find any defunct processes belonging to 20972
[2025-11-28 00:39:43] 2025-11-27 23:38:54,163 | INFO     | did not find any defunct processes belonging to 20972
[2025-11-28 00:39:43] 2025-11-27 23:38:54,246 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:39:43] 2025-11-27 23:38:54,246 | INFO     | ready for new job
[2025-11-28 00:39:43] 2025-11-27 23:38:54,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:39:43] 2025-11-27 23:38:54,252 | INFO     | ***************************************
[2025-11-28 00:39:43] 2025-11-27 23:38:54,252 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:39:43] 2025-11-27 23:38:54,252 | INFO     | ***************************************
[2025-11-28 00:39:43] 2025-11-27 23:38:54,252 | INFO     | 
[2025-11-28 00:39:43] 2025-11-27 23:38:54,253 | INFO     | pilot is running in a VM
[2025-11-28 00:39:43] 2025-11-27 23:38:54,253 | INFO     | architecture information:
[2025-11-28 00:39:43] 2025-11-27 23:38:54,254 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:39:43] 2025-11-27 23:38:54,330 | INFO     | cat /etc/os-release:
[2025-11-28 00:39:43] NAME="CentOS Linux"
[2025-11-28 00:39:43] VERSION="7 (Core)"
[2025-11-28 00:39:43] ID="centos"
[2025-11-28 00:39:43] ID_LIKE="rhel fedora"
[2025-11-28 00:39:43] VERSION_ID="7"
[2025-11-28 00:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:39:43] ANSI_COLOR="0;31"
[2025-11-28 00:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:39:43] HOME_URL="https://www.centos.org/"
[2025-11-28 00:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:39:43] 
[2025-11-28 00:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:39:43] 
[2025-11-28 00:39:43] 2025-11-27 23:38:54,331 | INFO     | ***************************************
[2025-11-28 00:39:43] 2025-11-27 23:38:54,834 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-28 00:39:43] 2025-11-27 23:38:55,093 | INFO     | sufficient remaining disk space (495185821696 B)
[2025-11-28 00:39:43] 2025-11-27 23:38:55,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:39:43] 2025-11-27 23:38:55,094 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:39:43] 2025-11-27 23:38:55,094 | INFO     | update_server=False
[2025-11-28 00:39:43] 2025-11-27 23:38:55,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:39:43] 2025-11-27 23:38:55,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:39:43] 2025-11-27 23:38:55,391 | INFO     | all job control threads have been joined
[2025-11-28 00:39:43] 2025-11-27 23:38:55,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:39:43] 2025-11-27 23:38:55,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:39:43] 2025-11-27 23:38:55,743 | INFO     | aborting loop
[2025-11-28 00:39:43] 2025-11-27 23:38:55,995 | INFO     | all data control threads have been joined
[2025-11-28 00:39:43] 2025-11-27 23:38:56,100 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,199 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,236 | INFO     | all payload control threads have been joined
[2025-11-28 00:39:43] 2025-11-27 23:38:56,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,397 | INFO     | [job] control thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,661 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,749 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:56,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:39:43] 2025-11-27 23:38:56,835 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,001 | INFO     | [data] control thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,168 | INFO     | [job] validate thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,213 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,242 | INFO     | [payload] control thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,395 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,686 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:57,824 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:38:59,705 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:39:05,148 | INFO     | job.realtimelogging is not enabled
[2025-11-28 00:39:43] 2025-11-27 23:39:06,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:39:43] 2025-11-27 23:39:23,662 | INFO     | PID=14413 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 00:39:43] 2025-11-27 23:39:23,663 | INFO     | .. there are 9 such processes running
[2025-11-28 00:39:43] 2025-11-27 23:39:23,663 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:39:43] 2025-11-27 23:39:23,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:39:43] 2025-11-27 23:39:23,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:39:43] 2025-11-27 23:39:32,774 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:39:43] 2025-11-27 23:39:34,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976328582976)>', '<ExcThread(monitor, started 139975601420032)>']
[2025-11-28 00:39:43] 2025-11-27 23:39:34,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:39:43] 2025-11-27 23:39:34,728 | INFO     | [monitor] control thread has ended
[2025-11-28 00:39:43] 2025-11-27 23:39:39,028 | INFO     | all workflow threads have been joined
[2025-11-28 00:39:43] 2025-11-27 23:39:39,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:39:43] 2025-11-27 23:39:39,029 | INFO     | traces error code: 0
[2025-11-28 00:39:43] 2025-11-27 23:39:39,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:39:43] 2025-11-27 23:39:39,324 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:39:43] 2025-11-27 23:39:39,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:39:43] 2025-11-27 23:39:39,487 [wrapper] pilotpid: 14413
[2025-11-28 00:39:43] 2025-11-27 23:39:39,597 [wrapper] Pilot exit status: 0
[2025-11-28 00:39:43] 2025-11-27 23:39:39,934 [wrapper] pandaids: 6895369087
[2025-11-28 00:39:43] 2025-11-27 23:39:40,440 [wrapper] cleanup supervisor_pilot 20643 14414
[2025-11-28 00:39:43] 2025-11-27 23:39:40,561 [wrapper] Test setup, not cleaning
[2025-11-28 00:39:43] 2025-11-27 23:39:40,673 [wrapper] apfmon messages muted
[2025-11-28 00:39:43] 2025-11-27 23:39:40,755 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:39:43] 2025-11-27 23:39:40,855 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:39:43]  *** Error codes and diagnostics ***
[2025-11-28 00:39:43]     "exeErrorCode": 0,
[2025-11-28 00:39:43]     "exeErrorDiag": "",
[2025-11-28 00:39:43]     "pilotErrorCode": 0,
[2025-11-28 00:39:43]     "pilotErrorDiag": "",
[2025-11-28 00:39:43]  *** Listing of results directory ***
[2025-11-28 00:39:43] total 1330224
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc    576529 Nov 23 20:32 pilot3.tar.gz
[2025-11-28 00:39:43] -rwx------. 1 boinc boinc     36292 Nov 23 20:51 runpilot2-wrapper.sh
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc      5112 Nov 23 20:51 queuedata.json
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc       100 Nov 27 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:39:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 01:52 run_atlas
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc       105 Nov 27 01:52 job.xml
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc      6390 Nov 27 01:52 init_data.xml
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc 409129898 Nov 27 01:52 EVNT.47483658._001190.pool.root.1
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:52 start_atlas.sh
[2025-11-28 00:39:43] drwxrwx--x. 2 boinc boinc        68 Nov 27 01:52 shared
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc    590100 Nov 27 01:52 input.tar.gz
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc         0 Nov 27 01:52 boinc_lockfile
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc      2783 Nov 27 01:53 pandaJob.out
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc    991546 Nov 27 01:56 agis_schedconf.cvmfs.json
[2025-11-28 00:39:43] drwx------. 5 boinc boinc      4096 Nov 27 01:56 pilot3
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:18 boinc_task_state.xml
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc 922447086 Nov 28 00:35 HITS.47556149._001761.pool.root.1
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc      1027 Nov 28 00:37 memory_monitor_summary.json
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc   1516240 Nov 28 00:37 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc   2430390 Nov 28 00:37 log.47556149._001761.job.log.tgz.1
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc        95 Nov 28 00:38 pilot_heartbeat.json
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc      7937 Nov 28 00:38 heartbeat.json
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc      8192 Nov 28 00:39 boinc_mmap_file
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc        29 Nov 28 00:39 wrapper_checkpoint.txt
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc      4956 Nov 28 00:39 pilotlog.txt
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc  10903643 Nov 28 00:39 log.47556149._001761.job.log.1
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc       353 Nov 28 00:39 output.list
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc       620 Nov 28 00:39 runtime_log
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc  13352960 Nov 28 00:39 result.tar.gz
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc      8817 Nov 28 00:39 runtime_log.err
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc       662 Nov 28 00:39 HQTLDmpIVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQjIKDmlTihPm.diag
[2025-11-28 00:39:43] -rw-r--r--. 1 boinc boinc     21353 Nov 28 00:39 stderr.txt
[2025-11-28 00:39:43] HITS file was successfully produced:
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc 922447086 Nov 28 00:35 shared/HITS.pool.root.1
[2025-11-28 00:39:43]  *** Contents of shared directory: ***
[2025-11-28 00:39:43] total 1314008
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc 409129898 Nov 27 01:52 ATLAS.root_0
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:52 start_atlas.sh
[2025-11-28 00:39:43] -rw-r--r--. 2 boinc boinc    590100 Nov 27 01:52 input.tar.gz
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc 922447086 Nov 28 00:35 HITS.pool.root.1
[2025-11-28 00:39:43] -rw-------. 1 boinc boinc  13352960 Nov 28 00:39 result.tar.gz
00:39:45 (10633): run_atlas exited; CPU time 308189.415567
00:39:45 (10633): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN