Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:29 (22121): wrapper (7.7.26015): starting
16:53:29 (22121): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:53:29] Arguments: --nthreads 8
[2025-11-24 16:53:29] Threads: 8
[2025-11-24 16:53:29] Checking for CVMFS
[2025-11-24 16:53:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:53:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:53:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:53:29] 2.11.2.0 2878 55182 78484 153259 0 82 15346431 20275200 1 130560 0 11292231 99.781 3325561 30968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 16:53:29] CVMFS is ok
[2025-11-24 16:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:53:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:53:29] Further information can be found at the LHC@home message board.
[2025-11-24 16:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:53:29] Checking for apptainer binary...
[2025-11-24 16:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:53:29] Running /usr/bin/apptainer --version
[2025-11-24 16:53:29] apptainer version 1.3.2-1.el7
[2025-11-24 16:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:53:31] c-204-27.aglt2.org
[2025-11-24 16:53:31] apptainer works
[2025-11-24 16:53:31] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:53:31] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:53:31] Starting ATLAS job with PandaID=6895355945
[2025-11-24 16:53:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:09:12]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:09:12] 2025-11-25 10:08:39,272 | INFO     | time since job start (44089s) is within the limit (172800.0s)
[2025-11-25 05:09:12] 2025-11-25 10:08:39,786 | INFO     | monitor loop #3234: job 0:6895355945 is in state 'finished'
[2025-11-25 05:09:12] 2025-11-25 10:08:39,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,732 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 05:09:12] 2025-11-25 10:08:40,737 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-25 05:09:12] 2025-11-25 10:08:40,739 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895355945/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,739 | INFO     | extracted standard info from prmon json
[2025-11-25 05:09:12] 2025-11-25 10:08:40,739 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:09:12] 2025-11-25 10:08:40,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:09:12] 2025-11-25 10:08:40,751 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:09:12] 2025-11-25 10:08:40,752 | INFO     | sum of square deviations: 117190770286.99854
[2025-11-25 05:09:12] 2025-11-25 10:08:40,762 | INFO     | sum of deviations: 689385254618.1396
[2025-11-25 05:09:12] 2025-11-25 10:08:40,763 | INFO     | mean x: 1764043283.6652834
[2025-11-25 05:09:12] 2025-11-25 10:08:40,763 | INFO     | mean y: 3239576.4716459196
[2025-11-25 05:09:12] 2025-11-25 10:08:40,763 | INFO     | intersect: -10373903822.183264
[2025-11-25 05:09:12] 2025-11-25 10:08:40,764 | INFO     | chi2: 7.15195330147304
[2025-11-25 05:09:12] 2025-11-25 10:08:40,765 | INFO     | sum of square deviations: 114776350787.27032
[2025-11-25 05:09:12] 2025-11-25 10:08:40,775 | INFO     | sum of deviations: 998011187217.4161
[2025-11-25 05:09:12] 2025-11-25 10:08:40,776 | INFO     | mean x: 1764043131.1699164
[2025-11-25 05:09:12] 2025-11-25 10:08:40,776 | INFO     | mean y: 3259069.9637883008
[2025-11-25 05:09:12] 2025-11-25 10:08:40,776 | INFO     | intersect: -15335569596.096874
[2025-11-25 05:09:12] 2025-11-25 10:08:40,777 | INFO     | chi2: 3.206531942032217
[2025-11-25 05:09:12] 2025-11-25 10:08:40,777 | INFO     | current chi2=3.206531942032217 (change=55.16564766478845 %)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,778 | INFO     | sum of square deviations: 112395327262.51038
[2025-11-25 05:09:12] 2025-11-25 10:08:40,788 | INFO     | sum of deviations: 1122271085145.884
[2025-11-25 05:09:12] 2025-11-25 10:08:40,788 | INFO     | mean x: 1764042978.6746142
[2025-11-25 05:09:12] 2025-11-25 10:08:40,788 | INFO     | mean y: 3267019.4908835907
[2025-11-25 05:09:12] 2025-11-25 10:08:40,789 | INFO     | intersect: -17610760859.953533
[2025-11-25 05:09:12] 2025-11-25 10:08:40,789 | INFO     | chi2: 2.41601531533395
[2025-11-25 05:09:12] 2025-11-25 10:08:40,789 | INFO     | current chi2=2.41601531533395 (change=24.653321438527705 %)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,790 | INFO     | right removable region: 712
[2025-11-25 05:09:12] 2025-11-25 10:08:40,790 | INFO     | sum of square deviations: 114776057377.2704
[2025-11-25 05:09:12] 2025-11-25 10:08:40,801 | INFO     | sum of deviations: 467064819885.4706
[2025-11-25 05:09:12] 2025-11-25 10:08:40,801 | INFO     | mean x: 1764043436.1699164
[2025-11-25 05:09:12] 2025-11-25 10:08:40,802 | INFO     | mean y: 3253594.512534819
[2025-11-25 05:09:12] 2025-11-25 10:08:40,802 | INFO     | intersect: -7175269946.129779
[2025-11-25 05:09:12] 2025-11-25 10:08:40,802 | INFO     | chi2: 4.938506895717154
[2025-11-25 05:09:12] 2025-11-25 10:08:40,803 | INFO     | current chi2=4.938506895717154 (change=30.94883750569229 %)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,803 | INFO     | sum of square deviations: 112394740442.51042
[2025-11-25 05:09:12] 2025-11-25 10:08:40,814 | INFO     | sum of deviations: 423916769527.01404
[2025-11-25 05:09:12] 2025-11-25 10:08:40,814 | INFO     | mean x: 1764043588.6746142
[2025-11-25 05:09:12] 2025-11-25 10:08:40,814 | INFO     | mean y: 3256356.2328190743
[2025-11-25 05:09:12] 2025-11-25 10:08:40,814 | INFO     | intersect: -6650148033.257138
[2025-11-25 05:09:12] 2025-11-25 10:08:40,815 | INFO     | chi2: 4.901354231863698
[2025-11-25 05:09:12] 2025-11-25 10:08:40,815 | INFO     | current chi2=4.901354231863698 (change=0.752305598392028 %)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,815 | INFO     | left removable region: 20
[2025-11-25 05:09:12] 2025-11-25 10:08:40,816 | INFO     | sum of square deviations: 102753504323.57817
[2025-11-25 05:09:12] 2025-11-25 10:08:40,826 | INFO     | sum of deviations: 802546751141.849
[2025-11-25 05:09:12] 2025-11-25 10:08:40,826 | INFO     | mean x: 1764043558.1878612
[2025-11-25 05:09:12] 2025-11-25 10:08:40,826 | INFO     | mean y: 3288892.1011560694
[2025-11-25 05:09:12] 2025-11-25 10:08:40,827 | INFO     | intersect: -13774610322.295929
[2025-11-25 05:09:12] 2025-11-25 10:08:40,827 | INFO     | chi2: 0.09142005006318758
[2025-11-25 05:09:12] 2025-11-25 10:08:40,828 | INFO     | current memory leak: 7.81 B/s (using 692 data points, chi2=0.09)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,828 | INFO     | could have reported an average CPU frequency of 2166 MHz (28 samples)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,828 | INFO     | ..............................
[2025-11-25 05:09:12] 2025-11-25 10:08:40,828 | INFO     | . Timing measurements:
[2025-11-25 05:09:12] 2025-11-25 10:08:40,828 | INFO     | . get job = 0 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . initial setup = 2 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . payload setup = 9 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . stage-in = 0 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . payload execution = 44047 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . stage-out = 3 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | . log creation = 0 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,829 | INFO     | ..............................
[2025-11-25 05:09:12] 2025-11-25 10:08:40,980 | INFO     | 
[2025-11-25 05:09:12] 2025-11-25 10:08:40,980 | INFO     | job summary report
[2025-11-25 05:09:12] 2025-11-25 10:08:40,981 | INFO     | --------------------------------------------------
[2025-11-25 05:09:12] 2025-11-25 10:08:40,981 | INFO     | PanDA job id: 6895355945
[2025-11-25 05:09:12] 2025-11-25 10:08:40,981 | INFO     | task id: 47556137
[2025-11-25 05:09:12] 2025-11-25 10:08:40,981 | INFO     | errors: (none)
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | pilot state: finished 
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | transexitcode: 0
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | exeerrorcode: 0
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | exeerrordiag: 
[2025-11-25 05:09:12] 2025-11-25 10:08:40,982 | INFO     | exitcode: 0
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | exitmsg: OK
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | cpuconsumptiontime: 341910 s
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | nevents: 1000
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | neventsw: 0
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | pid: 32369
[2025-11-25 05:09:12] 2025-11-25 10:08:40,983 | INFO     | pgrp: 32369
[2025-11-25 05:09:12] 2025-11-25 10:08:40,984 | INFO     | corecount: 8
[2025-11-25 05:09:12] 2025-11-25 10:08:40,984 | INFO     | event service: False
[2025-11-25 05:09:12] 2025-11-25 10:08:40,984 | INFO     | sizes: {0: 2284310, 6: 2284572, 11: 2284600, 44060: 2330190, 44064: 2339189, 44067: 2339245, 44073: 2339619}
[2025-11-25 05:09:12] 2025-11-25 10:08:40,984 | INFO     | --------------------------------------------------
[2025-11-25 05:09:12] 2025-11-25 10:08:40,984 | INFO     | 
[2025-11-25 05:09:12] 2025-11-25 10:08:40,985 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 05:09:12] 2025-11-25 10:08:41,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:09:12] 2025-11-25 10:08:41,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:09:12] 2025-11-25 10:08:41,017 | INFO     | job 6895355945 has completed (purged errors)
[2025-11-25 05:09:12] 2025-11-25 10:08:41,017 | INFO     | overall cleanup function is called
[2025-11-25 05:09:12] 2025-11-25 10:08:42,029 | INFO     | --- collectZombieJob: --- 10, [32369]
[2025-11-25 05:09:12] 2025-11-25 10:08:42,029 | INFO     | zombie collector waiting for pid 32369
[2025-11-25 05:09:12] 2025-11-25 10:08:42,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:09:12] 2025-11-25 10:08:42,030 | INFO     | collected zombie processes
[2025-11-25 05:09:12] 2025-11-25 10:08:42,030 | INFO     | will attempt to kill all subprocesses of pid=32369
[2025-11-25 05:09:12] 2025-11-25 10:08:42,121 | INFO     | process IDs to be killed: [32369] (in reverse order)
[2025-11-25 05:09:12] 2025-11-25 10:08:42,180 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:09:12] 2025-11-25 10:08:42,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:09:12] 2025-11-25 10:08:42,185 | INFO     | did not find any defunct processes belonging to 32369
[2025-11-25 05:09:12] 2025-11-25 10:08:42,188 | INFO     | did not find any defunct processes belonging to 32369
[2025-11-25 05:09:12] 2025-11-25 10:08:42,191 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:09:12] 2025-11-25 10:08:42,191 | INFO     | ready for new job
[2025-11-25 05:09:12] 2025-11-25 10:08:42,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:09:12] 2025-11-25 10:08:42,195 | INFO     | ***************************************
[2025-11-25 05:09:12] 2025-11-25 10:08:42,195 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:09:12] 2025-11-25 10:08:42,195 | INFO     | ***************************************
[2025-11-25 05:09:12] 2025-11-25 10:08:42,195 | INFO     | 
[2025-11-25 05:09:12] 2025-11-25 10:08:42,196 | INFO     | architecture information:
[2025-11-25 05:09:12] 2025-11-25 10:08:42,197 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:09:12] 2025-11-25 10:08:42,215 | INFO     | cat /etc/os-release:
[2025-11-25 05:09:12] NAME="CentOS Linux"
[2025-11-25 05:09:12] VERSION="7 (Core)"
[2025-11-25 05:09:12] ID="centos"
[2025-11-25 05:09:12] ID_LIKE="rhel fedora"
[2025-11-25 05:09:12] VERSION_ID="7"
[2025-11-25 05:09:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:09:12] ANSI_COLOR="0;31"
[2025-11-25 05:09:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:09:12] HOME_URL="https://www.centos.org/"
[2025-11-25 05:09:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:09:12] 
[2025-11-25 05:09:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:09:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:09:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:09:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:09:12] 
[2025-11-25 05:09:12] 2025-11-25 10:08:42,216 | INFO     | ***************************************
[2025-11-25 05:09:12] 2025-11-25 10:08:42,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 05:09:12] 2025-11-25 10:08:42,740 | INFO     | sufficient remaining disk space (17440964608 B)
[2025-11-25 05:09:12] 2025-11-25 10:08:42,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:09:12] 2025-11-25 10:08:42,741 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:09:12] 2025-11-25 10:08:42,741 | INFO     | update_server=False
[2025-11-25 05:09:12] 2025-11-25 10:08:42,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:09:12] 2025-11-25 10:08:42,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:09:12] 2025-11-25 10:08:42,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:09:12] 2025-11-25 10:08:43,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:09:12] 2025-11-25 10:08:43,304 | INFO     | aborting loop
[2025-11-25 05:09:12] 2025-11-25 10:08:43,681 | INFO     | all job control threads have been joined
[2025-11-25 05:09:12] 2025-11-25 10:08:43,693 | INFO     | all payload control threads have been joined
[2025-11-25 05:09:12] 2025-11-25 10:08:43,746 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:43,747 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:43,829 | INFO     | all data control threads have been joined
[2025-11-25 05:09:12] 2025-11-25 10:08:44,134 | INFO     | [job] validate thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,214 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,291 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,309 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,428 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,686 | INFO     | [job] control thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,699 | INFO     | [payload] control thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,743 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:44,832 | INFO     | [data] control thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:45,134 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:45,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:45,186 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:45,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:09:12] 2025-11-25 10:08:49,434 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:09:12] 2025-11-25 10:08:55,192 [wrapper] supervise_pilot (15 min periods counter: 50)
[2025-11-25 05:09:12] 2025-11-25 10:09:03,043 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:09:12] 2025-11-25 10:09:04,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697671087936)>', '<ExcThread(monitor, started 140696988137216)>']
[2025-11-25 05:09:12] 2025-11-25 10:09:09,075 | INFO     | all workflow threads have been joined
[2025-11-25 05:09:12] 2025-11-25 10:09:09,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:09:12] 2025-11-25 10:09:09,077 | INFO     | traces error code: 0
[2025-11-25 05:09:12] 2025-11-25 10:09:09,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:09:12] 2025-11-25 10:09:12,495 | INFO     | PID=25879 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 05:09:12] 2025-11-25 10:09:12,496 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:09:12] 2025-11-25 10:09:12,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:09:12] 2025-11-25 10:09:12,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:09:12] 2025-11-25 10:09:12,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:09:12] 2025-11-25 10:09:12,496 | INFO     | [monitor] control thread has ended
[2025-11-25 05:09:12] 2025-11-25 10:09:12,610 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:09:12] 2025-11-25 10:09:12,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:09:12] 2025-11-25 10:09:12,619 [wrapper] pilotpid: 25879
[2025-11-25 05:09:12] 2025-11-25 10:09:12,624 [wrapper] Pilot exit status: 0
[2025-11-25 05:09:12] 2025-11-25 10:09:12,640 [wrapper] pandaids: 6895355945
[2025-11-25 05:09:12] 2025-11-25 10:09:12,687 [wrapper] cleanup supervisor_pilot  9748 25880
[2025-11-25 05:09:12] 2025-11-25 10:09:12,693 [wrapper] Test setup, not cleaning
[2025-11-25 05:09:12] 2025-11-25 10:09:12,698 [wrapper] apfmon messages muted
[2025-11-25 05:09:12] 2025-11-25 10:09:12,703 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:09:12] 2025-11-25 10:09:12,708 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:09:12]  *** Error codes and diagnostics ***
[2025-11-25 05:09:12]     "exeErrorCode": 0,
[2025-11-25 05:09:12]     "exeErrorDiag": "",
[2025-11-25 05:09:12]     "pilotErrorCode": 0,
[2025-11-25 05:09:12]     "pilotErrorDiag": "",
[2025-11-25 05:09:12]  *** Listing of results directory ***
[2025-11-25 05:09:12] total 1312240
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-25 05:09:12] -rwx------ 1 boincer umatlas     36292 Nov 23 04:21 runpilot2-wrapper.sh
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 04:21 queuedata.json
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas       100 Nov 24 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:09:12] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 16:53 run_atlas
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas       105 Nov 24 16:53 job.xml
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas 410172421 Nov 24 16:53 EVNT.47483658._000678.pool.root.1
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 16:53 start_atlas.sh
[2025-11-25 05:09:12] drwxrwx--x 2 boincer umatlas      4096 Nov 24 16:53 shared
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 16:53 input.tar.gz
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas         0 Nov 24 16:53 boinc_lockfile
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 16:53 pandaJob.out
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas        57 Nov 24 16:53 setup.sh.local
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas    991801 Nov 24 16:53 agis_schedconf.cvmfs.json
[2025-11-25 05:09:12] drwx------ 5 boincer umatlas      4096 Nov 24 16:53 pilot3
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas       532 Nov 25 04:57 boinc_task_state.xml
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 05:02 init_data.xml
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas 913571708 Nov 25 05:07 HITS.47556137._006740.pool.root.1
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas      1064 Nov 25 05:08 memory_monitor_summary.json
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas   1516240 Nov 25 05:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas   1969155 Nov 25 05:08 log.47556137._006740.job.log.tgz.1
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas      8656 Nov 25 05:08 heartbeat.json
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 05:09 boinc_mmap_file
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas        29 Nov 25 05:09 wrapper_checkpoint.txt
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas        95 Nov 25 05:09 pilot_heartbeat.json
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas       745 Nov 25 05:09 pilotlog.txt
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas   6064729 Nov 25 05:09 log.47556137._006740.job.log.1
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas       353 Nov 25 05:09 output.list
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas       620 Nov 25 05:09 runtime_log
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas   8058880 Nov 25 05:09 result.tar.gz
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 05:09 runtime_log.err
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas       668 Nov 25 05:09 24YKDmpSLh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvlKKDmr2RVum.diag
[2025-11-25 05:09:12] -rw-r--r-- 1 boincer umatlas     21280 Nov 25 05:09 stderr.txt
[2025-11-25 05:09:12] HITS file was successfully produced:
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas 913571708 Nov 25 05:07 shared/HITS.pool.root.1
[2025-11-25 05:09:12]  *** Contents of shared directory: ***
[2025-11-25 05:09:12] total 1301196
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas 410172421 Nov 24 16:53 ATLAS.root_0
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 16:53 start_atlas.sh
[2025-11-25 05:09:12] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 16:53 input.tar.gz
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas 913571708 Nov 25 05:07 HITS.pool.root.1
[2025-11-25 05:09:12] -rw------- 1 boincer umatlas   8058880 Nov 25 05:09 result.tar.gz
05:09:14 (22121): run_atlas exited; CPU time 339824.649034
05:09:14 (22121): called boinc_finish(0)

</stderr_txt>
]]>

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