Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:25:54 (3336161): wrapper (7.7.26015): starting
14:25:54 (3336161): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:25:54] Arguments: --nthreads 8
[2025-11-24 14:25:54] Threads: 8
[2025-11-24 14:25:54] Checking for CVMFS
[2025-11-24 14:25:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:25:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:25:56] 2.13.3.0 9366 27542 334724 153257 1 134 23436758 32935936 23925 16776704 0 187311749 99.816 88676517 33159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 14:25:56] CVMFS is ok
[2025-11-24 14:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:25:56] Further information can be found at the LHC@home message board.
[2025-11-24 14:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:25:56] Checking for apptainer binary...
[2025-11-24 14:25:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:25:56] Running /usr/bin/apptainer --version
[2025-11-24 14:25:56] apptainer version 1.4.4-1.el9
[2025-11-24 14:25:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:25:57] c-6-2.aglt2.org
[2025-11-24 14:25:57] apptainer works
[2025-11-24 14:25:57] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:25:57] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:25:57] Starting ATLAS job with PandaID=6895367302
[2025-11-24 14:25:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:05:50]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:05:50] 2025-11-25 13:05:01,849 | INFO     | sum of square deviations: 347809934613.649
[2025-11-25 08:05:50] 2025-11-25 13:05:01,875 | INFO     | sum of deviations: 2484432575157.164
[2025-11-25 08:05:50] 2025-11-25 13:05:01,875 | INFO     | mean x: 1764044199.0567853
[2025-11-25 08:05:50] 2025-11-25 13:05:01,875 | INFO     | mean y: 2925263.437921078
[2025-11-25 08:05:50] 2025-11-25 13:05:01,875 | INFO     | intersect: -12597775395.161722
[2025-11-25 08:05:50] 2025-11-25 13:05:01,877 | INFO     | chi2: 9.548951398641128
[2025-11-25 08:05:50] 2025-11-25 13:05:01,878 | INFO     | sum of square deviations: 342813590359.8956
[2025-11-25 08:05:50] 2025-11-25 13:05:01,905 | INFO     | sum of deviations: 2843174919849.3438
[2025-11-25 08:05:50] 2025-11-25 13:05:01,905 | INFO     | mean x: 1764044046.5667312
[2025-11-25 08:05:50] 2025-11-25 13:05:01,905 | INFO     | mean y: 2936211.8065764024
[2025-11-25 08:05:50] 2025-11-25 13:05:01,906 | INFO     | intersect: -14627422478.006964
[2025-11-25 08:05:50] 2025-11-25 13:05:01,907 | INFO     | chi2: 6.291634422482736
[2025-11-25 08:05:50] 2025-11-25 13:05:01,907 | INFO     | current chi2=6.291634422482736 (change=34.11177667761433 %)
[2025-11-25 08:05:50] 2025-11-25 13:05:01,909 | INFO     | sum of square deviations: 337865340030.9352
[2025-11-25 08:05:50] 2025-11-25 13:05:01,935 | INFO     | sum of deviations: 3089363220989.4463
[2025-11-25 08:05:50] 2025-11-25 13:05:01,936 | INFO     | mean x: 1764043894.0767736
[2025-11-25 08:05:50] 2025-11-25 13:05:01,936 | INFO     | mean y: 2943791.3867832846
[2025-11-25 08:05:50] 2025-11-25 13:05:01,936 | INFO     | intersect: -16127069207.498518
[2025-11-25 08:05:50] 2025-11-25 13:05:01,937 | INFO     | chi2: 4.441711587429211
[2025-11-25 08:05:50] 2025-11-25 13:05:01,937 | INFO     | current chi2=4.441711587429211 (change=29.402897734219096 %)
[2025-11-25 08:05:50] 2025-11-25 13:05:01,939 | INFO     | sum of square deviations: 332964638199.0972
[2025-11-25 08:05:50] 2025-11-25 13:05:01,974 | INFO     | sum of deviations: 3131354972232.078
[2025-11-25 08:05:50] 2025-11-25 13:05:01,975 | INFO     | mean x: 1764043741.5820312
[2025-11-25 08:05:50] 2025-11-25 13:05:01,975 | INFO     | mean y: 2945094.724609375
[2025-11-25 08:05:50] 2025-11-25 13:05:01,975 | INFO     | intersect: -16586946166.144875
[2025-11-25 08:05:50] 2025-11-25 13:05:01,976 | INFO     | chi2: 4.266887971143554
[2025-11-25 08:05:50] 2025-11-25 13:05:01,976 | INFO     | current chi2=4.266887971143554 (change=3.9359515548113775 %)
[2025-11-25 08:05:50] 2025-11-25 13:05:01,977 | INFO     | right removable region: 1023
[2025-11-25 08:05:50] 2025-11-25 13:05:01,978 | INFO     | sum of square deviations: 342812286789.89514
[2025-11-25 08:05:50] 2025-11-25 13:05:02,007 | INFO     | sum of deviations: 2090818383402.0322
[2025-11-25 08:05:50] 2025-11-25 13:05:02,007 | INFO     | mean x: 1764044351.5667312
[2025-11-25 08:05:50] 2025-11-25 13:05:02,007 | INFO     | mean y: 2937271.5067698257
[2025-11-25 08:05:50] 2025-11-25 13:05:02,008 | INFO     | intersect: -10756001370.773413
[2025-11-25 08:05:50] 2025-11-25 13:05:02,009 | INFO     | chi2: 6.0055421181860815
[2025-11-25 08:05:50] 2025-11-25 13:05:02,009 | INFO     | current chi2=6.0055421181860815 (change=37.10783658359906 %)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,011 | INFO     | sum of square deviations: 337862921756.38696
[2025-11-25 08:05:50] 2025-11-25 13:05:02,039 | INFO     | sum of deviations: 1947331083255.4854
[2025-11-25 08:05:50] 2025-11-25 13:05:02,039 | INFO     | mean x: 1764044504.073858
[2025-11-25 08:05:50] 2025-11-25 13:05:02,039 | INFO     | mean y: 2941686.690962099
[2025-11-25 08:05:50] 2025-11-25 13:05:02,039 | INFO     | intersect: -10164432339.352465
[2025-11-25 08:05:50] 2025-11-25 13:05:02,041 | INFO     | chi2: 5.510726365188952
[2025-11-25 08:05:50] 2025-11-25 13:05:02,041 | INFO     | current chi2=5.510726365188952 (change=8.239318670311551 %)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,041 | INFO     | left removable region: 20
[2025-11-25 08:05:50] 2025-11-25 13:05:02,042 | INFO     | sum of square deviations: 312895998778.2689
[2025-11-25 08:05:50] 2025-11-25 13:05:02,069 | INFO     | sum of deviations: 2475200887771.8525
[2025-11-25 08:05:50] 2025-11-25 13:05:02,069 | INFO     | mean x: 1764044321.112662
[2025-11-25 08:05:50] 2025-11-25 13:05:02,069 | INFO     | mean y: 2965500.3110668
[2025-11-25 08:05:50] 2025-11-25 13:05:02,070 | INFO     | intersect: -13951716204.587124
[2025-11-25 08:05:50] 2025-11-25 13:05:02,075 | INFO     | chi2: 0.14543304180708483
[2025-11-25 08:05:50] 2025-11-25 13:05:02,076 | INFO     | current memory leak: 7.91 B/s (using 1003 data points, chi2=0.15)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,077 | INFO     | could have reported an average CPU frequency of 2599 MHz (38 samples)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,077 | INFO     | ..............................
[2025-11-25 08:05:50] 2025-11-25 13:05:02,077 | INFO     | . Timing measurements:
[2025-11-25 08:05:50] 2025-11-25 13:05:02,077 | INFO     | . get job = 0 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . initial setup = 5 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . payload setup = 36 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . stage-in = 0 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . payload execution = 63370 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . stage-out = 5 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | . log creation = 1 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,078 | INFO     | ..............................
[2025-11-25 08:05:50] 2025-11-25 13:05:02,198 | INFO     | 
[2025-11-25 08:05:50] 2025-11-25 13:05:02,198 | INFO     | job summary report
[2025-11-25 08:05:50] 2025-11-25 13:05:02,199 | INFO     | --------------------------------------------------
[2025-11-25 08:05:50] 2025-11-25 13:05:02,199 | INFO     | PanDA job id: 6895367302
[2025-11-25 08:05:50] 2025-11-25 13:05:02,199 | INFO     | task id: 47556149
[2025-11-25 08:05:50] 2025-11-25 13:05:02,199 | INFO     | errors: (none)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | pilot state: finished 
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | transexitcode: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | exeerrorcode: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | exeerrordiag: 
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | exitcode: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | exitmsg: OK
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | cpuconsumptiontime: 300629 s
[2025-11-25 08:05:50] 2025-11-25 13:05:02,207 | INFO     | nevents: 1000
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | neventsw: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | pid: 3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | pgrp: 3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | corecount: 8
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | event service: False
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | sizes: {0: 2283482, 1: 2284167, 2: 2284366, 13: 2284366, 24: 2284422, 31: 2284712, 34: 2284868, 63408: 2339167, 63414: 2348166, 63417: 2348222, 63430: 2348468}
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | --------------------------------------------------
[2025-11-25 08:05:50] 2025-11-25 13:05:02,208 | INFO     | 
[2025-11-25 08:05:50] 2025-11-25 13:05:02,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 08:05:50] 2025-11-25 13:05:02,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,467 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:05:50] 2025-11-25 13:05:02,470 | INFO     | job 6895367302 has completed (purged errors)
[2025-11-25 08:05:50] 2025-11-25 13:05:02,470 | INFO     | overall cleanup function is called
[2025-11-25 08:05:50] 2025-11-25 13:05:03,526 | INFO     | --- collectZombieJob: --- 10, [3349051]
[2025-11-25 08:05:50] 2025-11-25 13:05:03,526 | INFO     | zombie collector waiting for pid 3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:03,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:05:50] 2025-11-25 13:05:03,527 | INFO     | collected zombie processes
[2025-11-25 08:05:50] 2025-11-25 13:05:03,527 | INFO     | will attempt to kill all subprocesses of pid=3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:03,931 | INFO     | process IDs to be killed: [3349051] (in reverse order)
[2025-11-25 08:05:50] 2025-11-25 13:05:04,104 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:05:50] 2025-11-25 13:05:04,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:05:50] 2025-11-25 13:05:04,119 | INFO     | did not find any defunct processes belonging to 3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:04,134 | INFO     | did not find any defunct processes belonging to 3349051
[2025-11-25 08:05:50] 2025-11-25 13:05:04,137 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:05:50] 2025-11-25 13:05:04,137 | INFO     | ready for new job
[2025-11-25 08:05:50] 2025-11-25 13:05:04,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:05:50] 2025-11-25 13:05:04,143 | INFO     | ***************************************
[2025-11-25 08:05:50] 2025-11-25 13:05:04,143 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:05:50] 2025-11-25 13:05:04,143 | INFO     | ***************************************
[2025-11-25 08:05:50] 2025-11-25 13:05:04,143 | INFO     | 
[2025-11-25 08:05:50] 2025-11-25 13:05:04,146 | INFO     | architecture information:
[2025-11-25 08:05:50] 2025-11-25 13:05:04,147 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:05:50] 2025-11-25 13:05:04,197 | INFO     | cat /etc/os-release:
[2025-11-25 08:05:50] NAME="CentOS Linux"
[2025-11-25 08:05:50] VERSION="7 (Core)"
[2025-11-25 08:05:50] ID="centos"
[2025-11-25 08:05:50] ID_LIKE="rhel fedora"
[2025-11-25 08:05:50] VERSION_ID="7"
[2025-11-25 08:05:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:05:50] ANSI_COLOR="0;31"
[2025-11-25 08:05:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:05:50] HOME_URL="https://www.centos.org/"
[2025-11-25 08:05:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:05:50] 
[2025-11-25 08:05:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:05:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:05:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:05:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:05:50] 
[2025-11-25 08:05:50] 2025-11-25 13:05:04,198 | INFO     | ***************************************
[2025-11-25 08:05:50] 2025-11-25 13:05:04,710 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 08:05:50] 2025-11-25 13:05:04,785 | INFO     | sufficient remaining disk space (71131201536 B)
[2025-11-25 08:05:50] 2025-11-25 13:05:04,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:05:50] 2025-11-25 13:05:04,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:05:50] 2025-11-25 13:05:04,786 | INFO     | update_server=False
[2025-11-25 08:05:50] 2025-11-25 13:05:04,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:05:50] 2025-11-25 13:05:04,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:05:50] 2025-11-25 13:05:04,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:05:50] 2025-11-25 13:05:05,192 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 08:05:50] 2025-11-25 13:05:05,192 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 08:05:50] 2025-11-25 13:05:05,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:05:50] 2025-11-25 13:05:05,193 | INFO     | will abort loop
[2025-11-25 08:05:50] 2025-11-25 13:05:05,413 | INFO     | all job control threads have been joined
[2025-11-25 08:05:50] 2025-11-25 13:05:05,605 | INFO     | all payload control threads have been joined
[2025-11-25 08:05:50] 2025-11-25 13:05:05,792 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:05,802 | INFO     | all data control threads have been joined
[2025-11-25 08:05:50] 2025-11-25 13:05:05,934 | INFO     | [job] validate thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,021 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,197 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,418 | INFO     | [job] control thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,611 | INFO     | [payload] control thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,666 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,785 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,793 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,809 | INFO     | [data] control thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:06,993 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:07,195 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:07,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:05:50] 2025-11-25 13:05:07,349 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:08,221 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:08,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:15,079 | INFO     | job.realtimelogging is not enabled
[2025-11-25 08:05:50] 2025-11-25 13:05:16,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:05:50] 2025-11-25 13:05:34,231 | INFO     | PID=3340033 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:05:50] 2025-11-25 13:05:34,231 | INFO     | .. there are 37 such processes running
[2025-11-25 08:05:50] 2025-11-25 13:05:34,232 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:05:50] 2025-11-25 13:05:34,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:05:50] 2025-11-25 13:05:34,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:05:50] 2025-11-25 13:05:43,348 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:05:50] 2025-11-25 13:05:44,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194579781440)>', '<ExcThread(monitor, started 140194082703104)>']
[2025-11-25 08:05:50] 2025-11-25 13:05:45,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:05:50] 2025-11-25 13:05:45,310 | INFO     | [monitor] control thread has ended
[2025-11-25 08:05:50] 2025-11-25 13:05:49,589 | INFO     | all workflow threads have been joined
[2025-11-25 08:05:50] 2025-11-25 13:05:49,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:05:50] 2025-11-25 13:05:49,593 | INFO     | traces error code: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:49,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:05:50] 2025-11-25 13:05:49,807 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:05:50] 2025-11-25 13:05:49,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:05:50] 2025-11-25 13:05:49,813 [wrapper] pilotpid: 3340033
[2025-11-25 08:05:50] 2025-11-25 13:05:49,816 [wrapper] Pilot exit status: 0
[2025-11-25 08:05:50] 2025-11-25 13:05:49,830 [wrapper] pandaids: 6895367302
[2025-11-25 08:05:50] 2025-11-25 13:05:49,908 [wrapper] cleanup supervisor_pilot 2278227 3340034
[2025-11-25 08:05:50] 2025-11-25 13:05:49,912 [wrapper] Test setup, not cleaning
[2025-11-25 08:05:50] 2025-11-25 13:05:49,915 [wrapper] apfmon messages muted
[2025-11-25 08:05:50] 2025-11-25 13:05:49,918 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:05:50] 2025-11-25 13:05:49,921 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:05:50]  *** Error codes and diagnostics ***
[2025-11-25 08:05:50]     "exeErrorCode": 0,
[2025-11-25 08:05:50]     "exeErrorDiag": "",
[2025-11-25 08:05:50]     "pilotErrorCode": 0,
[2025-11-25 08:05:50]     "pilotErrorDiag": "",
[2025-11-25 08:05:50]  *** Listing of results directory ***
[2025-11-25 08:05:50] total 1335564
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-25 08:05:50] -rwx------. 1 boincer umatlas     36292 Nov 23 14:12 runpilot2-wrapper.sh
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:12 queuedata.json
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas       100 Nov 24 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:05:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 14:25 run_atlas
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas       105 Nov 24 14:25 job.xml
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas 412662902 Nov 24 14:25 EVNT.47483658._001185.pool.root.1
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 14:25 start_atlas.sh
[2025-11-25 08:05:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 14:25 shared
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 14:25 input.tar.gz
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas         0 Nov 24 14:25 boinc_lockfile
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 14:25 pandaJob.out
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas        57 Nov 24 14:25 setup.sh.local
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas    991801 Nov 24 14:26 agis_schedconf.cvmfs.json
[2025-11-25 08:05:50] drwx------. 5 boincer umatlas      4096 Nov 24 14:26 pilot3
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas       533 Nov 25 07:49 boinc_task_state.xml
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas      6656 Nov 25 08:01 init_data.xml
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas 930805315 Nov 25 08:04 HITS.47556149._001719.pool.root.1
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas      1070 Nov 25 08:04 memory_monitor_summary.json
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas   1516240 Nov 25 08:04 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas   2162857 Nov 25 08:04 log.47556149._001719.job.log.tgz.1
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas      8659 Nov 25 08:05 heartbeat.json
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas        95 Nov 25 08:05 pilot_heartbeat.json
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 08:05 boinc_mmap_file
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas        29 Nov 25 08:05 wrapper_checkpoint.txt
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas      5082 Nov 25 08:05 pilotlog.txt
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas   7949887 Nov 25 08:05 log.47556149._001719.job.log.1
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas       353 Nov 25 08:05 output.list
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas       620 Nov 25 08:05 runtime_log
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas  10137600 Nov 25 08:05 result.tar.gz
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas       662 Nov 25 08:05 SbVLDmagUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdhIKDmzpPAdm.diag
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 08:05 runtime_log.err
[2025-11-25 08:05:50] -rw-r--r--. 1 boincer umatlas     21202 Nov 25 08:05 stderr.txt
[2025-11-25 08:05:50] HITS file was successfully produced:
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas 930805315 Nov 25 08:04 shared/HITS.pool.root.1
[2025-11-25 08:05:50]  *** Contents of shared directory: ***
[2025-11-25 08:05:50] total 1322484
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas 412662902 Nov 24 14:25 ATLAS.root_0
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 14:25 start_atlas.sh
[2025-11-25 08:05:50] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 14:25 input.tar.gz
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas 930805315 Nov 25 08:04 HITS.pool.root.1
[2025-11-25 08:05:50] -rw-------. 1 boincer umatlas  10137600 Nov 25 08:05 result.tar.gz
08:05:51 (3336161): run_atlas exited; CPU time 302587.702865
08:05:51 (3336161): called boinc_finish(0)

</stderr_txt>
]]>

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