Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:53:53 (1389977): wrapper (7.7.26015): starting
07:53:53 (1389977): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 07:53:53] Arguments: --nthreads 3
[2025-11-27 07:53:53] Threads: 3
[2025-11-27 07:53:53] Checking for CVMFS
[2025-11-27 07:53:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:53:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:53:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:53:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:53:53] 2.9.2.0 3943730 12275 94692 153350 2 81 30360656 36864000 0 130560 0 4549254 99.940 600117 3332 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 07:53:53] CVMFS is ok
[2025-11-27 07:53:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 07:53:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 07:53:53] Further information can be found at the LHC@home message board.
[2025-11-27 07:53:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:53:53] Checking for apptainer binary...
[2025-11-27 07:53:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:53:53] Running /usr/bin/apptainer --version
[2025-11-27 07:53:53] apptainer version 1.4.1-1.1
[2025-11-27 07:53:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:53:53] thA331a
[2025-11-27 07:53:53] apptainer works
[2025-11-27 07:53:53] Set ATHENA_PROC_NUMBER=3
[2025-11-27 07:53:53] Set ATHENA_CORE_NUMBER=3
[2025-11-27 07:53:53] Starting ATLAS job with PandaID=6893852135
[2025-11-27 07:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:57:58]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:57:58] HOME_URL="https://www.centos.org/"
[2025-11-27 15:57:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:57:58] 
[2025-11-27 15:57:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:57:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:57:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:57:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:57:58] 
[2025-11-27 15:57:58] 2025-11-27 14:57:27,679 | INFO     | ***************************************
[2025-11-27 15:57:58] 2025-11-27 14:57:28,182 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 15:57:58] 2025-11-27 14:57:28,195 | INFO     | sufficient remaining disk space (326819119104 B)
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | INFO     | update_server=False
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:58] 2025-11-27 14:57:28,196 | INFO     | aborting loop
[2025-11-27 15:57:58] 2025-11-27 14:57:28,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:57:58] 2025-11-27 14:57:28,898 | INFO     | all data control threads have been joined
[2025-11-27 15:57:58] 2025-11-27 14:57:29,201 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,202 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,269 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,284 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,669 | INFO     | all payload control threads have been joined
[2025-11-27 15:57:58] 2025-11-27 14:57:29,741 | INFO     | all job control threads have been joined
[2025-11-27 15:57:58] 2025-11-27 14:57:29,845 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:29,904 | INFO     | [data] control thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,182 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,395 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:57:58] 2025-11-27 14:57:30,583 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,592 | INFO     | [job] validate thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,675 | INFO     | [payload] control thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,680 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:30,747 | INFO     | [job] control thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:31,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:58] 2025-11-27 14:57:32,168 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:34,571 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:57:58] 2025-11-27 14:57:37,425 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:57:58] 2025-11-27 14:57:37,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713784297280)>', '<ExcThread(monitor, started 140712926508800)>']
[2025-11-27 15:57:58] 2025-11-27 14:57:42,801 | INFO     | all workflow threads have been joined
[2025-11-27 15:57:58] 2025-11-27 14:57:42,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:57:58] 2025-11-27 14:57:42,802 | INFO     | traces error code: 0
[2025-11-27 15:57:58] 2025-11-27 14:57:42,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | INFO     | PID=1393695 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:57:58] 2025-11-27 14:57:58,530 | INFO     | [monitor] control thread has ended
[2025-11-27 15:57:58] 2025-11-27 14:57:58,576 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:57:58] 2025-11-27 14:57:58,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:57:58] 2025-11-27 14:57:58,581 [wrapper] pilotpid: 1393695
[2025-11-27 15:57:58] 2025-11-27 14:57:58,583 [wrapper] Pilot exit status: 0
[2025-11-27 15:57:58] 2025-11-27 14:57:58,590 [wrapper] pandaids: 6893852135
[2025-11-27 15:57:58] 2025-11-27 14:57:58,606 [wrapper] cleanup supervisor_pilot 1450865 1393696
[2025-11-27 15:57:58] 2025-11-27 14:57:58,608 [wrapper] Test setup, not cleaning
[2025-11-27 15:57:58] 2025-11-27 14:57:58,611 [wrapper] apfmon messages muted
[2025-11-27 15:57:58] 2025-11-27 14:57:58,613 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:57:58] 2025-11-27 14:57:58,615 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:57:58]  *** Error codes and diagnostics ***
[2025-11-27 15:57:58]     "exeErrorCode": 0,
[2025-11-27 15:57:58]     "exeErrorDiag": "",
[2025-11-27 15:57:58]     "pilotErrorCode": 0,
[2025-11-27 15:57:58]     "pilotErrorDiag": "",
[2025-11-27 15:57:58]  *** Listing of results directory ***
[2025-11-27 15:57:58] total 1312212
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-27 15:57:58] -rwx------ 1 boinc boinc     36292 Nov 20 12:47 runpilot2-wrapper.sh
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:47 queuedata.json
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc       100 Nov 27 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:57:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 07:53 run_atlas
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc       105 Nov 27 07:53 job.xml
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc 408009751 Nov 27 07:53 EVNT.47493127._000365.pool.root.1
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc    590097 Nov 27 07:53 input.tar.gz
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc     15847 Nov 27 07:53 start_atlas.sh
[2025-11-27 15:57:58] drwxrwx--x 2 boinc boinc      4096 Nov 27 07:53 shared
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc         0 Nov 27 07:53 boinc_setup_complete
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      6442 Nov 27 07:53 init_data.xml
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc         0 Nov 27 07:53 boinc_lockfile
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      2785 Nov 27 07:53 pandaJob.out
[2025-11-27 15:57:58] -rw------- 1 boinc boinc    991554 Nov 27 07:53 agis_schedconf.cvmfs.json
[2025-11-27 15:57:58] drwx------ 5 boinc boinc      4096 Nov 27 07:53 pilot3
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc       531 Nov 27 15:54 boinc_task_state.xml
[2025-11-27 15:57:58] -rw------- 1 boinc boinc 921291019 Nov 27 15:56 HITS.47523449._003642.pool.root.1
[2025-11-27 15:57:58] -rw------- 1 boinc boinc      1024 Nov 27 15:57 memory_monitor_summary.json
[2025-11-27 15:57:58] -rw------- 1 boinc boinc   1516240 Nov 27 15:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:57:58] -rw------- 1 boinc boinc   1166871 Nov 27 15:57 log.47523449._003642.job.log.tgz.1
[2025-11-27 15:57:58] -rw------- 1 boinc boinc        95 Nov 27 15:57 pilot_heartbeat.json
[2025-11-27 15:57:58] -rw------- 1 boinc boinc      8581 Nov 27 15:57 heartbeat.json
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:57 boinc_mmap_file
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc        28 Nov 27 15:57 wrapper_checkpoint.txt
[2025-11-27 15:57:58] -rw------- 1 boinc boinc       747 Nov 27 15:57 pilotlog.txt
[2025-11-27 15:57:58] -rw------- 1 boinc boinc   4082352 Nov 27 15:57 log.47523449._003642.job.log.1
[2025-11-27 15:57:58] -rw------- 1 boinc boinc       353 Nov 27 15:57 output.list
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:57 runtime_log
[2025-11-27 15:57:58] -rw------- 1 boinc boinc   5273600 Nov 27 15:57 result.tar.gz
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      8903 Nov 27 15:57 runtime_log.err
[2025-11-27 15:57:58] -rw------- 1 boinc boinc       666 Nov 27 15:57 TbmMDmoJIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdfHKDm7kMwJo.diag
[2025-11-27 15:57:58] -rw-r--r-- 1 boinc boinc      8357 Nov 27 15:57 stderr.txt
[2025-11-27 15:57:58] HITS file was successfully produced:
[2025-11-27 15:57:58] -rw------- 1 boinc boinc 921291019 Nov 27 15:56 shared/HITS.pool.root.1
[2025-11-27 15:57:58]  *** Contents of shared directory: ***
[2025-11-27 15:57:58] total 1303904
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc 408009751 Nov 27 07:53 ATLAS.root_0
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc    590097 Nov 27 07:53 input.tar.gz
[2025-11-27 15:57:58] -rw-r--r-- 2 boinc boinc     15847 Nov 27 07:53 start_atlas.sh
[2025-11-27 15:57:58] -rw------- 1 boinc boinc 921291019 Nov 27 15:56 HITS.pool.root.1
[2025-11-27 15:57:58] -rw------- 1 boinc boinc   5273600 Nov 27 15:57 result.tar.gz
15:58:00 (1389977): run_atlas exited; CPU time 85672.772108
15:58:00 (1389977): called boinc_finish(0)

</stderr_txt>
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