Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:33 (4551): wrapper (7.7.26015): starting
07:46:33 (4551): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 07:46:33] Arguments: --nthreads 8
[2025-11-27 07:46:33] Threads: 8
[2025-11-27 07:46:33] Checking for CVMFS
[2025-11-27 07:46:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:46:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:46:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:46:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:46:35] 2.11.2.0 3740 286452 139584 153350 1 85 24565390 25165824 1288 130560 10 132672365 99.874 79324428 2841 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 07:46:35] CVMFS is ok
[2025-11-27 07:46:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:46:35] Checking for apptainer binary...
[2025-11-27 07:46:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:46:35] Running /usr/bin/apptainer --version
[2025-11-27 07:46:36] apptainer version 1.3.2-1.el7
[2025-11-27 07:46:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:46:48] cg-vwn234.simple-grid.lan
[2025-11-27 07:46:48] apptainer works
[2025-11-27 07:46:48] Set ATHENA_PROC_NUMBER=8
[2025-11-27 07:46:48] Set ATHENA_CORE_NUMBER=8
[2025-11-27 07:46:48] Starting ATLAS job with PandaID=6893852128
[2025-11-27 07:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:22:05]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:22:05] 2025-11-28 06:21:16,986 | INFO     | monitor loop #5700: job 0:6893852128 is in state 'finished'
[2025-11-28 07:22:05] 2025-11-28 06:21:16,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:22:05] 2025-11-28 06:21:17,886 | INFO     | time since job start (84668s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:19,496 | INFO     | monitor loop #5701: job 0:6893852128 is in state 'finished'
[2025-11-28 07:22:05] 2025-11-28 06:21:19,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:22:05] 2025-11-28 06:21:19,892 | INFO     | time since job start (84670s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:21,900 | INFO     | time since job start (84672s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:22,001 | INFO     | monitor loop #5702: job 0:6893852128 is in state 'finished'
[2025-11-28 07:22:05] 2025-11-28 06:21:22,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:22:05] 2025-11-28 06:21:23,908 | INFO     | time since job start (84674s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:24,506 | INFO     | monitor loop #5703: job 0:6893852128 is in state 'finished'
[2025-11-28 07:22:05] 2025-11-28 06:21:24,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:22:05] 2025-11-28 06:21:25,917 | INFO     | time since job start (84676s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:27,012 | INFO     | monitor loop #5704: job 0:6893852128 is in state 'finished'
[2025-11-28 07:22:05] 2025-11-28 06:21:27,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:22:05] 2025-11-28 06:21:27,925 | INFO     | time since job start (84678s) is within the limit (172800.0s)
[2025-11-28 07:22:05] 2025-11-28 06:21:28,864 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 07:22:05] 2025-11-28 06:21:28,865 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 07:22:05] 2025-11-28 06:21:28,867 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6893852128/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 07:22:05] 2025-11-28 06:21:28,868 | INFO     | extracted standard info from prmon json
[2025-11-28 07:22:05] 2025-11-28 06:21:28,868 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 07:22:05] 2025-11-28 06:21:28,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 07:22:05] 2025-11-28 06:21:28,900 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:22:05] 2025-11-28 06:21:28,903 | INFO     | sum of square deviations: 811383026091.0978
[2025-11-28 07:22:05] 2025-11-28 06:21:28,974 | INFO     | sum of deviations: 3244568677795.9604
[2025-11-28 07:22:05] 2025-11-28 06:21:28,974 | INFO     | mean x: 1764268727.5732946
[2025-11-28 07:22:05] 2025-11-28 06:21:28,974 | INFO     | mean y: 2835510.569666183
[2025-11-28 07:22:05] 2025-11-28 06:21:28,974 | INFO     | intersect: -7052144527.990511
[2025-11-28 07:22:05] 2025-11-28 06:21:28,976 | INFO     | chi2: 24.070508441821897
[2025-11-28 07:22:05] 2025-11-28 06:21:28,978 | INFO     | sum of square deviations: 802583302877.8163
[2025-11-28 07:22:05] 2025-11-28 06:21:29,033 | INFO     | sum of deviations: 3716665999906.481
[2025-11-28 07:22:05] 2025-11-28 06:21:29,033 | INFO     | mean x: 1764268575.0772033
[2025-11-28 07:22:05] 2025-11-28 06:21:29,033 | INFO     | mean y: 2843691.335032775
[2025-11-28 07:22:05] 2025-11-28 06:21:29,034 | INFO     | intersect: -8167270244.727192
[2025-11-28 07:22:05] 2025-11-28 06:21:29,035 | INFO     | chi2: 20.628743552783707
[2025-11-28 07:22:05] 2025-11-28 06:21:29,035 | INFO     | current chi2=20.628743552783707 (change=14.298679636771656 %)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,036 | INFO     | right removable region: 1372
[2025-11-28 07:22:05] 2025-11-28 06:21:29,037 | INFO     | sum of square deviations: 802582400687.8164
[2025-11-28 07:22:05] 2025-11-28 06:21:29,092 | INFO     | sum of deviations: 2670092551413.032
[2025-11-28 07:22:05] 2025-11-28 06:21:29,093 | INFO     | mean x: 1764268880.0772033
[2025-11-28 07:22:05] 2025-11-28 06:21:29,093 | INFO     | mean y: 2845464.895848507
[2025-11-28 07:22:05] 2025-11-28 06:21:29,093 | INFO     | intersect: -5866659263.025934
[2025-11-28 07:22:05] 2025-11-28 06:21:29,096 | INFO     | chi2: 19.41058685102249
[2025-11-28 07:22:05] 2025-11-28 06:21:29,096 | INFO     | current chi2=19.41058685102249 (change=19.35946472448796 %)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,096 | INFO     | left removable region: 10
[2025-11-28 07:22:05] 2025-11-28 06:21:29,098 | INFO     | sum of square deviations: 783446573032.4473
[2025-11-28 07:22:05] 2025-11-28 06:21:29,159 | INFO     | sum of deviations: 2753164213040.1543
[2025-11-28 07:22:05] 2025-11-28 06:21:29,159 | INFO     | mean x: 1764268849.5859032
[2025-11-28 07:22:05] 2025-11-28 06:21:29,159 | INFO     | mean y: 2864328.4559471365
[2025-11-28 07:22:05] 2025-11-28 06:21:29,160 | INFO     | intersect: -6197075815.592983
[2025-11-28 07:22:05] 2025-11-28 06:21:29,161 | INFO     | chi2: 11.674939261678624
[2025-11-28 07:22:05] 2025-11-28 06:21:29,161 | INFO     | current memory leak: 3.51 B/s (using 1362 data points, chi2=11.67)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,162 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | ..............................
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . Timing measurements:
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . get job = 0 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . initial setup = 6 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . payload setup = 151 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . stage-in = 0 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . payload execution = 84221 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . stage-out = 5 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | . log creation = 2 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,163 | INFO     | ..............................
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | 
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | job summary report
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | --------------------------------------------------
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | PanDA job id: 6893852128
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | task id: 47523449
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | errors: (none)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | pilot state: finished 
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | transexitcode: 0
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | exeerrorcode: 0
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | exeerrordiag: 
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | exitcode: 0
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | exitmsg: OK
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | cpuconsumptiontime: 317610 s
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | nevents: 1000
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | neventsw: 0
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | pid: 14942
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | pgrp: 14942
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | corecount: 8
[2025-11-28 07:22:05] 2025-11-28 06:21:29,427 | INFO     | event service: False
[2025-11-28 07:22:05] 2025-11-28 06:21:29,428 | INFO     | sizes: {0: 2283436, 1: 2284122, 2: 2284321, 3: 2284321, 13: 2284349, 24: 2284405, 35: 2284561, 46: 2284589, 56: 2284617, 67: 2284645, 78: 2284673, 88: 2285009, 99:
[2025-11-28 07:22:05] 2025-11-28 06:21:29,428 | INFO     | --------------------------------------------------
[2025-11-28 07:22:05] 2025-11-28 06:21:29,428 | INFO     | 
[2025-11-28 07:22:05] 2025-11-28 06:21:29,428 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-11-28 07:22:05] 2025-11-28 06:21:29,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | job 6893852128 has completed (purged errors)
[2025-11-28 07:22:05] 2025-11-28 06:21:29,915 | INFO     | overall cleanup function is called
[2025-11-28 07:22:05] 2025-11-28 06:21:30,938 | INFO     | --- collectZombieJob: --- 10, [14942]
[2025-11-28 07:22:05] 2025-11-28 06:21:30,938 | INFO     | zombie collector waiting for pid 14942
[2025-11-28 07:22:05] 2025-11-28 06:21:30,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:22:05] 2025-11-28 06:21:30,938 | INFO     | collected zombie processes
[2025-11-28 07:22:05] 2025-11-28 06:21:30,938 | INFO     | will attempt to kill all subprocesses of pid=14942
[2025-11-28 07:22:05] 2025-11-28 06:21:31,066 | INFO     | process IDs to be killed: [14942] (in reverse order)
[2025-11-28 07:22:05] 2025-11-28 06:21:31,644 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:22:05] 2025-11-28 06:21:31,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:22:05] 2025-11-28 06:21:31,648 | INFO     | did not find any defunct processes belonging to 14942
[2025-11-28 07:22:05] 2025-11-28 06:21:31,650 | INFO     | did not find any defunct processes belonging to 14942
[2025-11-28 07:22:05] 2025-11-28 06:21:31,672 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:22:05] 2025-11-28 06:21:31,673 | INFO     | ready for new job
[2025-11-28 07:22:05] 2025-11-28 06:21:31,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:22:05] 2025-11-28 06:21:31,678 | INFO     | ***************************************
[2025-11-28 07:22:05] 2025-11-28 06:21:31,678 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:22:05] 2025-11-28 06:21:31,679 | INFO     | ***************************************
[2025-11-28 07:22:05] 2025-11-28 06:21:31,679 | INFO     | 
[2025-11-28 07:22:05] 2025-11-28 06:21:31,679 | INFO     | pilot is running in a VM
[2025-11-28 07:22:05] 2025-11-28 06:21:31,679 | INFO     | architecture information:
[2025-11-28 07:22:05] 2025-11-28 06:21:31,680 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:22:05] 2025-11-28 06:21:31,912 | INFO     | cat /etc/os-release:
[2025-11-28 07:22:05] NAME="CentOS Linux"
[2025-11-28 07:22:05] VERSION="7 (Core)"
[2025-11-28 07:22:05] ID="centos"
[2025-11-28 07:22:05] ID_LIKE="rhel fedora"
[2025-11-28 07:22:05] VERSION_ID="7"
[2025-11-28 07:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:22:05] ANSI_COLOR="0;31"
[2025-11-28 07:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:22:05] HOME_URL="https://www.centos.org/"
[2025-11-28 07:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:22:05] 
[2025-11-28 07:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:22:05] 
[2025-11-28 07:22:05] 2025-11-28 06:21:31,913 | INFO     | ***************************************
[2025-11-28 07:22:05] 2025-11-28 06:21:32,416 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-11-28 07:22:05] 2025-11-28 06:21:32,474 | INFO     | sufficient remaining disk space (495447965696 B)
[2025-11-28 07:22:05] 2025-11-28 06:21:32,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:22:05] 2025-11-28 06:21:32,475 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:22:05] 2025-11-28 06:21:32,475 | INFO     | update_server=False
[2025-11-28 07:22:05] 2025-11-28 06:21:32,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:22:05] 2025-11-28 06:21:32,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:22:05] 2025-11-28 06:21:32,612 | INFO     | all data control threads have been joined
[2025-11-28 07:22:05] 2025-11-28 06:21:33,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:22:05] 2025-11-28 06:21:33,060 | INFO     | aborting loop
[2025-11-28 07:22:05] 2025-11-28 06:21:33,195 | INFO     | all job control threads have been joined
[2025-11-28 07:22:05] 2025-11-28 06:21:33,480 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:33,568 | INFO     | all payload control threads have been joined
[2025-11-28 07:22:05] 2025-11-28 06:21:33,618 | INFO     | [data] control thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:33,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:33,783 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,066 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,174 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,201 | INFO     | [job] control thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,207 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,207 | INFO     | [job] validate thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:22:05] 2025-11-28 06:21:34,453 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,483 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,574 | INFO     | [payload] control thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:34,623 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:35,300 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:35,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:22:05] 2025-11-28 06:21:36,122 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:22:05] 2025-11-28 06:21:39,432 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:22:05] 2025-11-28 06:21:41,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389020514112)>', '<ExcThread(monitor, started 140387918280448)>']
[2025-11-28 07:22:05] 2025-11-28 06:21:46,263 | INFO     | all workflow threads have been joined
[2025-11-28 07:22:05] 2025-11-28 06:21:46,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:22:05] 2025-11-28 06:21:46,263 | INFO     | traces error code: 0
[2025-11-28 07:22:05] 2025-11-28 06:21:46,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:22:05] 2025-11-28 06:22:01,085 | INFO     | PID=8338 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 07:22:05] 2025-11-28 06:22:01,086 | INFO     | .. there are 9 such processes running
[2025-11-28 07:22:05] 2025-11-28 06:22:01,086 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:22:05] 2025-11-28 06:22:01,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:22:05] 2025-11-28 06:22:01,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:22:05] 2025-11-28 06:22:01,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:22:05] 2025-11-28 06:22:01,087 | INFO     | [monitor] control thread has ended
[2025-11-28 07:22:05] 2025-11-28 06:22:01,303 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:22:05] 2025-11-28 06:22:01,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:22:05] 2025-11-28 06:22:01,488 [wrapper] pilotpid: 8338
[2025-11-28 07:22:05] 2025-11-28 06:22:01,636 [wrapper] Pilot exit status: 0
[2025-11-28 07:22:05] 2025-11-28 06:22:02,097 [wrapper] pandaids: 6893852128
[2025-11-28 07:22:05] 2025-11-28 06:22:02,998 [wrapper] cleanup supervisor_pilot 22203 8339
[2025-11-28 07:22:05] 2025-11-28 06:22:03,085 [wrapper] Test setup, not cleaning
[2025-11-28 07:22:05] 2025-11-28 06:22:03,163 [wrapper] apfmon messages muted
[2025-11-28 07:22:05] 2025-11-28 06:22:03,233 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:22:05] 2025-11-28 06:22:03,298 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:22:05]  *** Error codes and diagnostics ***
[2025-11-28 07:22:05]     "exeErrorCode": 0,
[2025-11-28 07:22:05]     "exeErrorDiag": "",
[2025-11-28 07:22:05]     "pilotErrorCode": 0,
[2025-11-28 07:22:05]     "pilotErrorDiag": "",
[2025-11-28 07:22:05]  *** Listing of results directory ***
[2025-11-28 07:22:05] total 1329416
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc    576529 Nov 20 12:09 pilot3.tar.gz
[2025-11-28 07:22:05] -rwx------. 1 boinc boinc     36292 Nov 20 12:44 runpilot2-wrapper.sh
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc      5112 Nov 20 12:44 queuedata.json
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc       100 Nov 27 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:22:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 07:46 run_atlas
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc       105 Nov 27 07:46 job.xml
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc      6393 Nov 27 07:46 init_data.xml
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc 410705392 Nov 27 07:46 EVNT.47493127._000364.pool.root.1
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:46 start_atlas.sh
[2025-11-28 07:22:05] drwxrwx--x. 2 boinc boinc        68 Nov 27 07:46 shared
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc    590100 Nov 27 07:46 input.tar.gz
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc         0 Nov 27 07:46 boinc_lockfile
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc      2785 Nov 27 07:46 pandaJob.out
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc    991554 Nov 27 07:50 agis_schedconf.cvmfs.json
[2025-11-28 07:22:05] drwx------. 5 boinc boinc      4096 Nov 27 07:50 pilot3
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc       533 Nov 28 06:55 boinc_task_state.xml
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc 919166872 Nov 28 07:18 HITS.47523449._003635.pool.root.1
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc      1027 Nov 28 07:19 memory_monitor_summary.json
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc   1516240 Nov 28 07:19 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc   2466797 Nov 28 07:19 log.47523449._003635.job.log.tgz.1
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc      8631 Nov 28 07:21 heartbeat.json
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc      8192 Nov 28 07:21 boinc_mmap_file
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc        29 Nov 28 07:21 wrapper_checkpoint.txt
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc        95 Nov 28 07:22 pilot_heartbeat.json
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc       819 Nov 28 07:22 pilotlog.txt
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc  11309545 Nov 28 07:22 log.47523449._003635.job.log.1
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc       353 Nov 28 07:22 output.list
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc       620 Nov 28 07:22 runtime_log
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc  13793280 Nov 28 07:22 result.tar.gz
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc       662 Nov 28 07:22 TN2MDmqGIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxYGKDmGQO8Co.diag
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc      8833 Nov 28 07:22 runtime_log.err
[2025-11-28 07:22:05] -rw-r--r--. 1 boinc boinc     21441 Nov 28 07:22 stderr.txt
[2025-11-28 07:22:05] HITS file was successfully produced:
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc 919166872 Nov 28 07:18 shared/HITS.pool.root.1
[2025-11-28 07:22:05]  *** Contents of shared directory: ***
[2025-11-28 07:22:05] total 1312772
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc 410705392 Nov 27 07:46 ATLAS.root_0
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc     15847 Nov 27 07:46 start_atlas.sh
[2025-11-28 07:22:05] -rw-r--r--. 2 boinc boinc    590100 Nov 27 07:46 input.tar.gz
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc 919166872 Nov 28 07:18 HITS.pool.root.1
[2025-11-28 07:22:05] -rw-------. 1 boinc boinc  13793280 Nov 28 07:22 result.tar.gz
07:22:06 (4551): run_atlas exited; CPU time 318167.741081
07:22:06 (4551): called boinc_finish(0)

</stderr_txt>
]]>

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