Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:59:06 (7964): wrapper (7.7.26015): starting
11:59:06 (7964): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 11:59:06] Arguments: --nthreads 12
[2025-11-24 11:59:06] Threads: 12
[2025-11-24 11:59:06] Checking for CVMFS
[2025-11-24 11:59:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 11:59:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 11:59:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 11:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 11:59:06] 2.11.2.0 2998 285026 95932 153252 3 81 14676053 20275201 1 130560 1 128423788 99.967 16811677 14472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 11:59:06] CVMFS is ok
[2025-11-24 11:59:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 11:59:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 11:59:06] Further information can be found at the LHC@home message board.
[2025-11-24 11:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 11:59:06] Checking for apptainer binary...
[2025-11-24 11:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 11:59:06] Running /usr/bin/apptainer --version
[2025-11-24 11:59:06] apptainer version 1.3.2-1.el7
[2025-11-24 11:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 11:59:07] c-205-25.aglt2.org
[2025-11-24 11:59:07] apptainer works
[2025-11-24 11:59:07] Set ATHENA_PROC_NUMBER=12
[2025-11-24 11:59:07] Set ATHENA_CORE_NUMBER=12
[2025-11-24 11:59:07] Starting ATLAS job with PandaID=6895367190
[2025-11-24 11:59:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:31:12 (18038): wrapper (7.7.26015): starting
18:31:12 (18038): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 18:31:12] Arguments: --nthreads 12
[2025-11-24 18:31:12] Threads: 12
[2025-11-24 18:31:12] This job has been restarted, cleaning up previous attempt
[2025-11-24 18:31:12] Checking for CVMFS
[2025-11-24 18:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:31:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:31:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:31:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:31:13] 2.11.2.0 2998 285418 96800 153263 3 49 15179619 20275200 1 130560 1 128580823 99.967 16827511 14482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 18:31:13] CVMFS is ok
[2025-11-24 18:31:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:31:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:31:13] Further information can be found at the LHC@home message board.
[2025-11-24 18:31:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:31:13] Checking for apptainer binary...
[2025-11-24 18:31:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:31:13] Running /usr/bin/apptainer --version
[2025-11-24 18:31:13] apptainer version 1.3.2-1.el7
[2025-11-24 18:31:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:31:14] c-205-25.aglt2.org
[2025-11-24 18:31:14] apptainer works
[2025-11-24 18:31:14] Set ATHENA_PROC_NUMBER=12
[2025-11-24 18:31:14] Set ATHENA_CORE_NUMBER=12
[2025-11-24 18:31:14] Starting ATLAS job with PandaID=6895367190
[2025-11-24 18:31:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:41:18]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:41:18] 2025-11-25 06:40:52,231 | INFO     | time since job start (25762s) is within the limit (172800.0s)
[2025-11-25 01:41:18] 2025-11-25 06:40:52,695 | INFO     | monitor loop #1932: job 0:6895367190 is in state 'finished'
[2025-11-25 01:41:18] 2025-11-25 06:40:52,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,118 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 01:41:18] 2025-11-25 06:40:54,122 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 01:41:18] 2025-11-25 06:40:54,125 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895367190/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,126 | INFO     | extracted standard info from prmon json
[2025-11-25 01:41:18] 2025-11-25 06:40:54,126 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:41:18] 2025-11-25 06:40:54,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:41:18] 2025-11-25 06:40:54,132 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:41:18] 2025-11-25 06:40:54,133 | INFO     | sum of square deviations: 23303174239.345974
[2025-11-25 01:41:18] 2025-11-25 06:40:54,137 | INFO     | sum of deviations: 359305733918.7771
[2025-11-25 01:41:18] 2025-11-25 06:40:54,137 | INFO     | mean x: 1764039959.7582939
[2025-11-25 01:41:18] 2025-11-25 06:40:54,137 | INFO     | mean y: 3428950.13507109
[2025-11-25 01:41:18] 2025-11-25 06:40:54,137 | INFO     | intersect: -27195855829.39601
[2025-11-25 01:41:18] 2025-11-25 06:40:54,138 | INFO     | chi2: 5.4755103002973184
[2025-11-25 01:41:18] 2025-11-25 06:40:54,138 | INFO     | sum of square deviations: 22484671206.50841
[2025-11-25 01:41:18] 2025-11-25 06:40:54,142 | INFO     | sum of deviations: 505336988402.04706
[2025-11-25 01:41:18] 2025-11-25 06:40:54,142 | INFO     | mean x: 1764039807.261391
[2025-11-25 01:41:18] 2025-11-25 06:40:54,142 | INFO     | mean y: 3456124.779376499
[2025-11-25 01:41:18] 2025-11-25 06:40:54,142 | INFO     | intersect: -39642868050.277466
[2025-11-25 01:41:18] 2025-11-25 06:40:54,143 | INFO     | chi2: 2.9649199459164692
[2025-11-25 01:41:18] 2025-11-25 06:40:54,143 | INFO     | current chi2=2.9649199459164692 (change=45.8512579958899 %)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,143 | INFO     | sum of square deviations: 21685563886.162716
[2025-11-25 01:41:18] 2025-11-25 06:40:54,147 | INFO     | sum of deviations: 542729665344.1988
[2025-11-25 01:41:18] 2025-11-25 06:40:54,147 | INFO     | mean x: 1764039654.764563
[2025-11-25 01:41:18] 2025-11-25 06:40:54,147 | INFO     | mean y: 3463220.3834951455
[2025-11-25 01:41:18] 2025-11-25 06:40:54,147 | INFO     | intersect: -44145568665.99369
[2025-11-25 01:41:18] 2025-11-25 06:40:54,148 | INFO     | chi2: 2.614869131162238
[2025-11-25 01:41:18] 2025-11-25 06:40:54,148 | INFO     | current chi2=2.614869131162238 (change=11.80641707498207 %)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,148 | INFO     | right removable region: 411
[2025-11-25 01:41:18] 2025-11-25 06:40:54,148 | INFO     | sum of square deviations: 22484630214.028805
[2025-11-25 01:41:18] 2025-11-25 06:40:54,152 | INFO     | sum of deviations: 214097097018.51764
[2025-11-25 01:41:18] 2025-11-25 06:40:54,152 | INFO     | mean x: 1764040112.258993
[2025-11-25 01:41:18] 2025-11-25 06:40:54,152 | INFO     | mean y: 3455928.3285371703
[2025-11-25 01:41:18] 2025-11-25 06:40:54,152 | INFO     | intersect: -16793612267.31506
[2025-11-25 01:41:18] 2025-11-25 06:40:54,153 | INFO     | chi2: 3.0001067710834874
[2025-11-25 01:41:18] 2025-11-25 06:40:54,153 | INFO     | current chi2=3.0001067710834874 (change=45.208636153591335 %)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,154 | INFO     | sum of square deviations: 21685482267.211166
[2025-11-25 01:41:18] 2025-11-25 06:40:54,157 | INFO     | sum of deviations: 180965402394.44882
[2025-11-25 01:41:18] 2025-11-25 06:40:54,157 | INFO     | mean x: 1764040264.7597086
[2025-11-25 01:41:18] 2025-11-25 06:40:54,157 | INFO     | mean y: 3462244.075242718
[2025-11-25 01:41:18] 2025-11-25 06:40:54,158 | INFO     | intersect: -14717458066.511187
[2025-11-25 01:41:18] 2025-11-25 06:40:54,158 | INFO     | chi2: 2.937614914947271
[2025-11-25 01:41:18] 2025-11-25 06:40:54,158 | INFO     | current chi2=2.937614914947271 (change=2.082987736921368 %)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,158 | INFO     | left removable region: 20
[2025-11-25 01:41:18] 2025-11-25 06:40:54,159 | INFO     | sum of square deviations: 18535627217.263443
[2025-11-25 01:41:18] 2025-11-25 06:40:54,162 | INFO     | sum of deviations: 322305762528.9973
[2025-11-25 01:41:18] 2025-11-25 06:40:54,162 | INFO     | mean x: 1764040234.2710998
[2025-11-25 01:41:18] 2025-11-25 06:40:54,162 | INFO     | mean y: 3506108.4245524295
[2025-11-25 01:41:18] 2025-11-25 06:40:54,162 | INFO     | intersect: -30670413159.27848
[2025-11-25 01:41:18] 2025-11-25 06:40:54,163 | INFO     | chi2: 0.0285052574720387
[2025-11-25 01:41:18] 2025-11-25 06:40:54,163 | INFO     | current memory leak: 17.39 B/s (using 391 data points, chi2=0.03)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,163 | INFO     | could have reported an average CPU frequency of 2374 MHz (18 samples)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | ..............................
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . Timing measurements:
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . get job = 0 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . initial setup = 2 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . payload setup = 7 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . stage-in = 0 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . payload execution = 25720 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . stage-out = 3 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,164 | INFO     | . log creation = 0 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,165 | INFO     | ..............................
[2025-11-25 01:41:18] 2025-11-25 06:40:54,242 | INFO     | time since job start (25764s) is within the limit (172800.0s)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,247 | INFO     | 
[2025-11-25 01:41:18] 2025-11-25 06:40:54,247 | INFO     | job summary report
[2025-11-25 01:41:18] 2025-11-25 06:40:54,247 | INFO     | --------------------------------------------------
[2025-11-25 01:41:18] 2025-11-25 06:40:54,247 | INFO     | PanDA job id: 6895367190
[2025-11-25 01:41:18] 2025-11-25 06:40:54,247 | INFO     | task id: 47556137
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | errors: (none)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | pilot state: finished 
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | transexitcode: 0
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | exeerrorcode: 0
[2025-11-25 01:41:18] 2025-11-25 06:40:54,248 | INFO     | exeerrordiag: 
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | exitcode: 0
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | exitmsg: OK
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | cpuconsumptiontime: 295255 s
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | nevents: 1000
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | neventsw: 0
[2025-11-25 01:41:18] 2025-11-25 06:40:54,249 | INFO     | pid: 28142
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | pgrp: 28142
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | corecount: 12
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | event service: False
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | sizes: {0: 2284138, 1: 2284337, 6: 2284599, 12: 2284627, 25732: 2321865, 25733: 2321864, 25738: 2331042, 25741: 2331098, 25748: 2331344}
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | --------------------------------------------------
[2025-11-25 01:41:18] 2025-11-25 06:40:54,250 | INFO     | 
[2025-11-25 01:41:18] 2025-11-25 06:40:54,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 01:41:18] 2025-11-25 06:40:54,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:41:18] 2025-11-25 06:40:54,279 | INFO     | job 6895367190 has completed (purged errors)
[2025-11-25 01:41:18] 2025-11-25 06:40:54,280 | INFO     | overall cleanup function is called
[2025-11-25 01:41:18] 2025-11-25 06:40:55,296 | INFO     | --- collectZombieJob: --- 10, [28142]
[2025-11-25 01:41:18] 2025-11-25 06:40:55,297 | INFO     | zombie collector waiting for pid 28142
[2025-11-25 01:41:18] 2025-11-25 06:40:55,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:41:18] 2025-11-25 06:40:55,297 | INFO     | collected zombie processes
[2025-11-25 01:41:18] 2025-11-25 06:40:55,297 | INFO     | will attempt to kill all subprocesses of pid=28142
[2025-11-25 01:41:18] 2025-11-25 06:40:55,390 | INFO     | process IDs to be killed: [28142] (in reverse order)
[2025-11-25 01:41:18] 2025-11-25 06:40:55,442 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:41:18] 2025-11-25 06:40:55,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:41:18] 2025-11-25 06:40:55,445 | INFO     | did not find any defunct processes belonging to 28142
[2025-11-25 01:41:18] 2025-11-25 06:40:55,447 | INFO     | did not find any defunct processes belonging to 28142
[2025-11-25 01:41:18] 2025-11-25 06:40:55,449 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:41:18] 2025-11-25 06:40:55,450 | INFO     | ready for new job
[2025-11-25 01:41:18] 2025-11-25 06:40:55,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:41:18] 2025-11-25 06:40:55,452 | INFO     | ***************************************
[2025-11-25 01:41:18] 2025-11-25 06:40:55,452 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:41:18] 2025-11-25 06:40:55,452 | INFO     | ***************************************
[2025-11-25 01:41:18] 2025-11-25 06:40:55,452 | INFO     | 
[2025-11-25 01:41:18] 2025-11-25 06:40:55,453 | INFO     | architecture information:
[2025-11-25 01:41:18] 2025-11-25 06:40:55,454 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:41:18] 2025-11-25 06:40:55,468 | INFO     | cat /etc/os-release:
[2025-11-25 01:41:18] NAME="CentOS Linux"
[2025-11-25 01:41:18] VERSION="7 (Core)"
[2025-11-25 01:41:18] ID="centos"
[2025-11-25 01:41:18] ID_LIKE="rhel fedora"
[2025-11-25 01:41:18] VERSION_ID="7"
[2025-11-25 01:41:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:41:18] ANSI_COLOR="0;31"
[2025-11-25 01:41:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:41:18] HOME_URL="https://www.centos.org/"
[2025-11-25 01:41:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:41:18] 
[2025-11-25 01:41:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:41:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:41:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:41:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:41:18] 
[2025-11-25 01:41:18] 2025-11-25 06:40:55,469 | INFO     | ***************************************
[2025-11-25 01:41:18] 2025-11-25 06:40:55,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 01:41:18] 2025-11-25 06:40:55,988 | INFO     | sufficient remaining disk space (28260171776 B)
[2025-11-25 01:41:18] 2025-11-25 06:40:55,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:41:18] 2025-11-25 06:40:55,989 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:41:18] 2025-11-25 06:40:55,989 | INFO     | update_server=False
[2025-11-25 01:41:18] 2025-11-25 06:40:55,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:41:18] 2025-11-25 06:40:55,989 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 01:41:18] 2025-11-25 06:40:55,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:41:18] 2025-11-25 06:40:55,990 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:41:18] 2025-11-25 06:40:55,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:41:18] 2025-11-25 06:40:55,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:41:18] 2025-11-25 06:40:56,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:41:18] 2025-11-25 06:40:56,209 | INFO     | aborting loop
[2025-11-25 01:41:18] 2025-11-25 06:40:56,363 | INFO     | all job control threads have been joined
[2025-11-25 01:41:18] 2025-11-25 06:40:56,429 | INFO     | all payload control threads have been joined
[2025-11-25 01:41:18] 2025-11-25 06:40:56,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:41:18] 2025-11-25 06:40:56,994 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:56,994 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,038 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,075 | INFO     | all data control threads have been joined
[2025-11-25 01:41:18] 2025-11-25 06:40:57,127 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,214 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,232 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,281 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,368 | INFO     | [job] control thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:41:18] 2025-11-25 06:40:57,434 | INFO     | [payload] control thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,854 | INFO     | [job] validate thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,868 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:57,934 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:58,081 | INFO     | [data] control thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:40:58,522 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:41:01,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:41:18] 2025-11-25 06:41:11,695 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:41:18] 2025-11-25 06:41:13,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799607785280)>', '<ExcThread(monitor, started 139799012820736)>']
[2025-11-25 01:41:18] 2025-11-25 06:41:14,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:41:18] 2025-11-25 06:41:14,075 | INFO     | [monitor] control thread has ended
[2025-11-25 01:41:18] 2025-11-25 06:41:18,578 | INFO     | all workflow threads have been joined
[2025-11-25 01:41:18] 2025-11-25 06:41:18,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:41:18] 2025-11-25 06:41:18,578 | INFO     | traces error code: 0
[2025-11-25 01:41:18] 2025-11-25 06:41:18,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:41:18] 2025-11-25 06:41:18,675 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:41:18] 2025-11-25 06:41:18,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:41:18] 2025-11-25 06:41:18,682 [wrapper] pilotpid: 21761
[2025-11-25 01:41:18] 2025-11-25 06:41:18,686 [wrapper] Pilot exit status: 0
[2025-11-25 01:41:18] 2025-11-25 06:41:18,701 [wrapper] pandaids: 6895367190 6895367190
[2025-11-25 01:41:18] 2025-11-25 06:41:18,738 [wrapper] cleanup supervisor_pilot 32069 21762
[2025-11-25 01:41:18] 2025-11-25 06:41:18,742 [wrapper] Test setup, not cleaning
[2025-11-25 01:41:18] 2025-11-25 06:41:18,746 [wrapper] apfmon messages muted
[2025-11-25 01:41:18] 2025-11-25 06:41:18,750 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:41:18] 2025-11-25 06:41:18,754 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:41:18]  *** Error codes and diagnostics ***
[2025-11-25 01:41:18]     "exeErrorCode": 0,
[2025-11-25 01:41:18]     "exeErrorDiag": "",
[2025-11-25 01:41:18]     "pilotErrorCode": 0,
[2025-11-25 01:41:18]     "pilotErrorDiag": "",
[2025-11-25 01:41:18]  *** Listing of results directory ***
[2025-11-25 01:41:18] total 1700808
[2025-11-25 01:41:18] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-25 01:41:18] -rwx------ 1 boincer umatlas     36292 Nov 23 14:00 runpilot2-wrapper.sh
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 14:00 queuedata.json
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas       100 Nov 24 11:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:41:18] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 11:59 run_atlas
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas       105 Nov 24 11:59 job.xml
[2025-11-25 01:41:18] -rw-r--r-- 3 boincer umatlas 407884598 Nov 24 11:59 EVNT.47483658._000856.pool.root.1
[2025-11-25 01:41:18] -rw-r--r-- 3 boincer umatlas 407884598 Nov 24 11:59 ATLAS.root_0
[2025-11-25 01:41:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 11:59 start_atlas.sh
[2025-11-25 01:41:18] drwxrwx--x 2 boincer umatlas      4096 Nov 24 11:59 shared
[2025-11-25 01:41:18] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 11:59 input.tar.gz
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas         0 Nov 24 11:59 boinc_lockfile
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 18:31 pandaJob.out
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas        57 Nov 24 18:31 setup.sh.local
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas    991801 Nov 24 18:31 agis_schedconf.cvmfs.json
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas       533 Nov 25 01:31 boinc_task_state.xml
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 01:38 init_data.xml
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas 910384723 Nov 25 01:40 HITS.47556137._008430.pool.root.1
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas      1061 Nov 25 01:40 memory_monitor_summary.json
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas        96 Nov 25 01:40 pilot_heartbeat.json
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas   1516227 Nov 25 01:40 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas   2170002 Nov 25 01:40 log.47556137._008430.job.log.tgz.1
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas      8667 Nov 25 01:40 heartbeat.json
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 01:41 boinc_mmap_file
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas        29 Nov 25 01:41 wrapper_checkpoint.txt
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas      4552 Nov 25 01:41 pilotlog.txt
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas   3606312 Nov 25 01:41 log.47556137._008430.job.log.1
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas       353 Nov 25 01:41 output.list
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas       620 Nov 25 01:41 runtime_log
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas   5795840 Nov 25 01:41 result.tar.gz
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas      9430 Nov 25 01:41 runtime_log.err
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas       795 Nov 25 01:41 M2zMDmbVUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmChIKDmBm7Ysn.diag
[2025-11-25 01:41:18] -rw-r--r-- 1 boincer umatlas     23418 Nov 25 01:41 stderr.txt
[2025-11-25 01:41:18] HITS file was successfully produced:
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas 910384723 Nov 25 01:40 shared/HITS.pool.root.1
[2025-11-25 01:41:18]  *** Contents of shared directory: ***
[2025-11-25 01:41:18] total 1293636
[2025-11-25 01:41:18] -rw-r--r-- 3 boincer umatlas 407884598 Nov 24 11:59 ATLAS.root_0
[2025-11-25 01:41:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 11:59 start_atlas.sh
[2025-11-25 01:41:18] -rw-r--r-- 2 boincer umatlas    590096 Nov 24 11:59 input.tar.gz
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas 910384723 Nov 25 01:40 HITS.pool.root.1
[2025-11-25 01:41:18] -rw------- 1 boincer umatlas   5795840 Nov 25 01:41 result.tar.gz
01:41:20 (18038): run_atlas exited; CPU time 288519.365597
01:41:20 (18038): called boinc_finish(0)

</stderr_txt>
]]>

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