Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:05:52 (22783): wrapper (7.7.26015): starting
02:05:52 (22783): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 02:05:52] Arguments: --nthreads 8
[2025-11-27 02:05:52] Threads: 8
[2025-11-27 02:05:52] Checking for CVMFS
[2025-11-27 02:05:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:05:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:05:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:05:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:05:55] 2.11.2.0 18802 286078 139176 153341 3 85 18780916 25165824 1288 130560 11 139962351 99.890 77205301 2621 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 02:05:55] CVMFS is ok
[2025-11-27 02:05:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:05:55] Checking for apptainer binary...
[2025-11-27 02:05:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:05:55] Running /usr/bin/apptainer --version
[2025-11-27 02:05:55] apptainer version 1.3.2-1.el7
[2025-11-27 02:05:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:06:06] cg-vwn230.simple-grid.lan
[2025-11-27 02:06:06] apptainer works
[2025-11-27 02:06:06] Set ATHENA_PROC_NUMBER=8
[2025-11-27 02:06:06] Set ATHENA_CORE_NUMBER=8
[2025-11-27 02:06:06] Starting ATLAS job with PandaID=6895366937
[2025-11-27 02:06:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:20:00]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:20:00] 2025-11-28 00:19:18,318 | INFO     | .. there are 9 such processes running
[2025-11-28 01:20:00] 2025-11-28 00:19:19,319 | INFO     | time since job start (83352s) is within the limit (172800.0s)
[2025-11-28 01:20:00] 2025-11-28 00:19:20,716 | INFO     | monitor loop #5608: job 0:6895366937 is in state 'finished'
[2025-11-28 01:20:00] 2025-11-28 00:19:20,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:20:00] 2025-11-28 00:19:21,326 | INFO     | time since job start (83354s) is within the limit (172800.0s)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,144 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:20:00] 2025-11-28 00:19:23,147 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 01:20:00] 2025-11-28 00:19:23,150 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895366937/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,150 | INFO     | extracted standard info from prmon json
[2025-11-28 01:20:00] 2025-11-28 00:19:23,151 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:20:00] 2025-11-28 00:19:23,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:20:00] 2025-11-28 00:19:23,183 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:20:00] 2025-11-28 00:19:23,188 | INFO     | sum of square deviations: 774851431512.0848
[2025-11-28 01:20:00] 2025-11-28 00:19:23,227 | INFO     | monitor loop #5609: job 0:6895366937 is in state 'finished'
[2025-11-28 01:20:00] 2025-11-28 00:19:23,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,273 | INFO     | sum of deviations: 3254446001455.1367
[2025-11-28 01:20:00] 2025-11-28 00:19:23,273 | INFO     | mean x: 1764247686.0854826
[2025-11-28 01:20:00] 2025-11-28 00:19:23,274 | INFO     | mean y: 2852608.809137804
[2025-11-28 01:20:00] 2025-11-28 00:19:23,274 | INFO     | intersect: -7407147029.899445
[2025-11-28 01:20:00] 2025-11-28 00:19:23,275 | INFO     | chi2: 19.086834651813874
[2025-11-28 01:20:00] 2025-11-28 00:19:23,281 | INFO     | sum of square deviations: 766318362631.1714
[2025-11-28 01:20:00] 2025-11-28 00:19:23,332 | INFO     | time since job start (83356s) is within the limit (172800.0s)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,381 | INFO     | sum of deviations: 3706929890415.8906
[2025-11-28 01:20:00] 2025-11-28 00:19:23,382 | INFO     | mean x: 1764247533.589497
[2025-11-28 01:20:00] 2025-11-28 00:19:23,382 | INFO     | mean y: 2860693.75295858
[2025-11-28 01:20:00] 2025-11-28 00:19:23,382 | INFO     | intersect: -8531375513.115923
[2025-11-28 01:20:00] 2025-11-28 00:19:23,384 | INFO     | chi2: 15.910871332091146
[2025-11-28 01:20:00] 2025-11-28 00:19:23,384 | INFO     | current chi2=15.910871332091146 (change=16.639549604003655 %)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,384 | INFO     | right removable region: 1351
[2025-11-28 01:20:00] 2025-11-28 00:19:23,386 | INFO     | sum of square deviations: 766317464101.1707
[2025-11-28 01:20:00] 2025-11-28 00:19:23,433 | INFO     | sum of deviations: 2673975315179.562
[2025-11-28 01:20:00] 2025-11-28 00:19:23,434 | INFO     | mean x: 1764247838.589497
[2025-11-28 01:20:00] 2025-11-28 00:19:23,434 | INFO     | mean y: 2862981.5325443787
[2025-11-28 01:20:00] 2025-11-28 00:19:23,434 | INFO     | intersect: -6153273856.325546
[2025-11-28 01:20:00] 2025-11-28 00:19:23,436 | INFO     | chi2: 14.201447993424793
[2025-11-28 01:20:00] 2025-11-28 00:19:23,436 | INFO     | current chi2=14.201447993424793 (change=25.59558327773751 %)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,438 | INFO     | sum of square deviations: 757846381590.214
[2025-11-28 01:20:00] 2025-11-28 00:19:23,485 | INFO     | sum of deviations: 2195530431195.9353
[2025-11-28 01:20:00] 2025-11-28 00:19:23,486 | INFO     | mean x: 1764247991.0935411
[2025-11-28 01:20:00] 2025-11-28 00:19:23,486 | INFO     | mean y: 2871594.659242762
[2025-11-28 01:20:00] 2025-11-28 00:19:23,486 | INFO     | intersect: -5108269985.900073
[2025-11-28 01:20:00] 2025-11-28 00:19:23,488 | INFO     | chi2: 11.006810117429236
[2025-11-28 01:20:00] 2025-11-28 00:19:23,488 | INFO     | current chi2=11.006810117429236 (change=22.495155969128362 %)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,488 | INFO     | left removable region: 20
[2025-11-28 01:20:00] 2025-11-28 00:19:23,490 | INFO     | sum of square deviations: 731160362534.1042
[2025-11-28 01:20:00] 2025-11-28 00:19:23,537 | INFO     | sum of deviations: 2342579392388.9795
[2025-11-28 01:20:00] 2025-11-28 00:19:23,537 | INFO     | mean x: 1764248113.1021788
[2025-11-28 01:20:00] 2025-11-28 00:19:23,537 | INFO     | mean y: 2888995.3531179563
[2025-11-28 01:20:00] 2025-11-28 00:19:23,537 | INFO     | intersect: -5649621021.0409
[2025-11-28 01:20:00] 2025-11-28 00:19:23,539 | INFO     | chi2: 5.4667760644651215
[2025-11-28 01:20:00] 2025-11-28 00:19:23,539 | INFO     | current memory leak: 3.20 B/s (using 1331 data points, chi2=5.47)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,540 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | ..............................
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . Timing measurements:
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . get job = 0 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . initial setup = 11 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . payload setup = 164 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . stage-in = 0 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . payload execution = 82900 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . stage-out = 5 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | . log creation = 2 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,541 | INFO     | ..............................
[2025-11-28 01:20:00] 2025-11-28 00:19:23,658 | INFO     | 
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | job summary report
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | --------------------------------------------------
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | PanDA job id: 6895366937
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | task id: 47556137
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | errors: (none)
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:20:00] 2025-11-28 00:19:23,659 | INFO     | pilot state: finished 
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | transexitcode: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | exeerrorcode: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | exeerrordiag: 
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | exitcode: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | exitmsg: OK
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | cpuconsumptiontime: 313362 s
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | nevents: 1000
[2025-11-28 01:20:00] 2025-11-28 00:19:23,660 | INFO     | neventsw: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | pid: 690
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | pgrp: 690
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | corecount: 8
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | event service: False
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | sizes: {0: 2284088, 1: 2284343, 12: 2284343, 23: 2284371, 33: 2284399, 44: 2284455, 55: 2284611, 65: 2284639, 76: 2284667, 87: 2284723, 95: 2285013, 98: 2285321, 8
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | --------------------------------------------------
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | 
[2025-11-28 01:20:00] 2025-11-28 00:19:23,661 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-28 01:20:00] 2025-11-28 00:19:24,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:20:00] 2025-11-28 00:19:24,271 | INFO     | job 6895366937 has completed (purged errors)
[2025-11-28 01:20:00] 2025-11-28 00:19:24,271 | INFO     | overall cleanup function is called
[2025-11-28 01:20:00] 2025-11-28 00:19:25,301 | INFO     | --- collectZombieJob: --- 10, [690]
[2025-11-28 01:20:00] 2025-11-28 00:19:25,302 | INFO     | zombie collector waiting for pid 690
[2025-11-28 01:20:00] 2025-11-28 00:19:25,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:20:00] 2025-11-28 00:19:25,302 | INFO     | collected zombie processes
[2025-11-28 01:20:00] 2025-11-28 00:19:25,302 | INFO     | will attempt to kill all subprocesses of pid=690
[2025-11-28 01:20:00] 2025-11-28 00:19:25,449 | INFO     | process IDs to be killed: [690] (in reverse order)
[2025-11-28 01:20:00] 2025-11-28 00:19:26,316 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:20:00] 2025-11-28 00:19:26,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:20:00] 2025-11-28 00:19:26,319 | INFO     | did not find any defunct processes belonging to 690
[2025-11-28 01:20:00] 2025-11-28 00:19:26,322 | INFO     | did not find any defunct processes belonging to 690
[2025-11-28 01:20:00] 2025-11-28 00:19:26,359 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:20:00] 2025-11-28 00:19:26,360 | INFO     | ready for new job
[2025-11-28 01:20:00] 2025-11-28 00:19:26,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:20:00] 2025-11-28 00:19:26,365 | INFO     | ***************************************
[2025-11-28 01:20:00] 2025-11-28 00:19:26,365 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:20:00] 2025-11-28 00:19:26,365 | INFO     | ***************************************
[2025-11-28 01:20:00] 2025-11-28 00:19:26,365 | INFO     | 
[2025-11-28 01:20:00] 2025-11-28 00:19:26,366 | INFO     | pilot is running in a VM
[2025-11-28 01:20:00] 2025-11-28 00:19:26,366 | INFO     | architecture information:
[2025-11-28 01:20:00] 2025-11-28 00:19:26,373 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:20:00] 2025-11-28 00:19:26,536 | INFO     | cat /etc/os-release:
[2025-11-28 01:20:00] NAME="CentOS Linux"
[2025-11-28 01:20:00] VERSION="7 (Core)"
[2025-11-28 01:20:00] ID="centos"
[2025-11-28 01:20:00] ID_LIKE="rhel fedora"
[2025-11-28 01:20:00] VERSION_ID="7"
[2025-11-28 01:20:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:20:00] ANSI_COLOR="0;31"
[2025-11-28 01:20:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:20:00] HOME_URL="https://www.centos.org/"
[2025-11-28 01:20:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:20:00] 
[2025-11-28 01:20:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:20:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:20:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:20:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:20:00] 
[2025-11-28 01:20:00] 2025-11-28 00:19:26,536 | INFO     | ***************************************
[2025-11-28 01:20:00] 2025-11-28 00:19:27,039 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-28 01:20:00] 2025-11-28 00:19:27,273 | INFO     | sufficient remaining disk space (495325282304 B)
[2025-11-28 01:20:00] 2025-11-28 00:19:27,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:20:00] 2025-11-28 00:19:27,273 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:20:00] 2025-11-28 00:19:27,274 | INFO     | update_server=False
[2025-11-28 01:20:00] 2025-11-28 00:19:27,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:20:00] 2025-11-28 00:19:27,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:20:00] 2025-11-28 00:19:27,274 | INFO     | aborting loop
[2025-11-28 01:20:00] 2025-11-28 00:19:27,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:20:00] 2025-11-28 00:19:27,494 | INFO     | all data control threads have been joined
[2025-11-28 01:20:00] 2025-11-28 00:19:28,068 | INFO     | all job control threads have been joined
[2025-11-28 01:20:00] 2025-11-28 00:19:28,167 | INFO     | all payload control threads have been joined
[2025-11-28 01:20:00] 2025-11-28 00:19:28,279 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:28,286 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:28,372 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:28,500 | INFO     | [data] control thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:28,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:20:00] 2025-11-28 00:19:28,822 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,032 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,074 | INFO     | [job] control thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,173 | INFO     | [payload] control thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:20:00] 2025-11-28 00:19:29,289 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,352 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,476 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,545 | INFO     | [job] validate thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,681 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:29,760 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:31,715 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:20:00] 2025-11-28 00:19:33,276 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:20:00] 2025-11-28 00:19:34,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623799924544)>', '<ExcThread(monitor, started 139623137273600)>']
[2025-11-28 01:20:00] 2025-11-28 00:19:39,686 | INFO     | all workflow threads have been joined
[2025-11-28 01:20:00] 2025-11-28 00:19:39,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:20:00] 2025-11-28 00:19:39,687 | INFO     | traces error code: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:39,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:20:00] 2025-11-28 00:19:56,516 | INFO     | PID=26548 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 01:20:00] 2025-11-28 00:19:56,517 | INFO     | .. there are 9 such processes running
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | CRITICAL | thread 'MainThread' is not alive
[2025-11-28 01:20:00] 2025-11-28 00:19:56,518 | INFO     | [monitor] control thread has ended
[2025-11-28 01:20:00] 2025-11-28 00:19:56,894 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:20:00] 2025-11-28 00:19:56,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:20:00] 2025-11-28 00:19:56,962 [wrapper] pilotpid: 26548
[2025-11-28 01:20:00] 2025-11-28 00:19:56,978 [wrapper] Pilot exit status: 0
[2025-11-28 01:20:00] 2025-11-28 00:19:57,290 [wrapper] pandaids: 6895366937
[2025-11-28 01:20:00] 2025-11-28 00:19:58,140 [wrapper] cleanup supervisor_pilot 18511 26549
[2025-11-28 01:20:00] 2025-11-28 00:19:58,143 [wrapper] Test setup, not cleaning
[2025-11-28 01:20:00] 2025-11-28 00:19:58,222 [wrapper] apfmon messages muted
[2025-11-28 01:20:00] 2025-11-28 00:19:58,310 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:20:00] 2025-11-28 00:19:58,417 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:20:00]  *** Error codes and diagnostics ***
[2025-11-28 01:20:00]     "exeErrorCode": 0,
[2025-11-28 01:20:00]     "exeErrorDiag": "",
[2025-11-28 01:20:00]     "pilotErrorCode": 0,
[2025-11-28 01:20:00]     "pilotErrorDiag": "",
[2025-11-28 01:20:00]  *** Listing of results directory ***
[2025-11-28 01:20:00] total 1334324
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc    576529 Nov 23 19:33 pilot3.tar.gz
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc      5112 Nov 23 19:49 queuedata.json
[2025-11-28 01:20:00] -rwx------. 1 boinc boinc     36292 Nov 23 19:49 runpilot2-wrapper.sh
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc       100 Nov 27 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:20:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 02:05 run_atlas
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc       105 Nov 27 02:05 job.xml
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc 409009881 Nov 27 02:05 EVNT.47483658._000851.pool.root.1
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:05 start_atlas.sh
[2025-11-28 01:20:00] drwxrwx--x. 2 boinc boinc        68 Nov 27 02:05 shared
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc    590108 Nov 27 02:05 input.tar.gz
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc      6393 Nov 27 02:05 init_data.xml
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc         0 Nov 27 02:05 boinc_lockfile
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc      2786 Nov 27 02:06 pandaJob.out
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc    991546 Nov 27 02:09 agis_schedconf.cvmfs.json
[2025-11-28 01:20:00] drwx------. 5 boinc boinc      4096 Nov 27 02:10 pilot3
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:59 boinc_task_state.xml
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc 926401646 Nov 28 01:16 HITS.47556137._008380.pool.root.1
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc      1027 Nov 28 01:17 memory_monitor_summary.json
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc   1516240 Nov 28 01:17 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc   2448032 Nov 28 01:17 log.47556137._008380.job.log.tgz.1
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc      8626 Nov 28 01:19 heartbeat.json
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc      8192 Nov 28 01:19 boinc_mmap_file
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc        29 Nov 28 01:19 wrapper_checkpoint.txt
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc        95 Nov 28 01:19 pilot_heartbeat.json
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc       890 Nov 28 01:19 pilotlog.txt
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc  11071101 Nov 28 01:19 log.47556137._008380.job.log.1
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc       353 Nov 28 01:20 output.list
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc       620 Nov 28 01:20 runtime_log
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc  13537280 Nov 28 01:20 result.tar.gz
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc      8817 Nov 28 01:20 runtime_log.err
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc       662 Nov 28 01:20 jEyMDmpKUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmygIKDmWe3xOo.diag
[2025-11-28 01:20:00] -rw-r--r--. 1 boinc boinc     21081 Nov 28 01:20 stderr.txt
[2025-11-28 01:20:00] HITS file was successfully produced:
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc 926401646 Nov 28 01:16 shared/HITS.pool.root.1
[2025-11-28 01:20:00]  *** Contents of shared directory: ***
[2025-11-28 01:20:00] total 1317932
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc 409009881 Nov 27 02:05 ATLAS.root_0
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:05 start_atlas.sh
[2025-11-28 01:20:00] -rw-r--r--. 2 boinc boinc    590108 Nov 27 02:05 input.tar.gz
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc 926401646 Nov 28 01:16 HITS.pool.root.1
[2025-11-28 01:20:00] -rw-------. 1 boinc boinc  13537280 Nov 28 01:20 result.tar.gz
01:20:02 (22783): run_atlas exited; CPU time 313919.061057
01:20:02 (22783): called boinc_finish(0)

</stderr_txt>
]]>

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