Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:46 (14319): wrapper (7.7.26015): starting
10:58:46 (14319): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 10:58:46] Arguments: --nthreads 12
[2025-11-24 10:58:46] Threads: 12
[2025-11-24 10:58:46] Checking for CVMFS
[2025-11-24 10:58:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:58:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:58:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:58:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:58:47] 2.11.2.0 2924 284966 97516 153250 1 82 14551267 20275201 1 130560 4 130096796 99.966 17258004 14019 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:58:47] CVMFS is ok
[2025-11-24 10:58:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:58:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:58:47] Further information can be found at the LHC@home message board.
[2025-11-24 10:58:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:58:47] Checking for apptainer binary...
[2025-11-24 10:58:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:58:47] Running /usr/bin/apptainer --version
[2025-11-24 10:58:47] apptainer version 1.3.2-1.el7
[2025-11-24 10:58:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:58:48] c-205-28.aglt2.org
[2025-11-24 10:58:48] apptainer works
[2025-11-24 10:58:48] Set ATHENA_PROC_NUMBER=12
[2025-11-24 10:58:48] Set ATHENA_CORE_NUMBER=12
[2025-11-24 10:58:48] Starting ATLAS job with PandaID=6895367186
[2025-11-24 10:58:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:10:12]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:10:12] 2025-11-24 23:09:36,656 | INFO     | time since job start (25833s) is within the limit (172800.0s)
[2025-11-24 18:10:12] 2025-11-24 23:09:36,968 | INFO     | monitor loop #1938: job 0:6895367186 is in state 'finished'
[2025-11-24 18:10:12] 2025-11-24 23:09:36,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:10:12] 2025-11-24 23:09:38,662 | INFO     | time since job start (25835s) is within the limit (172800.0s)
[2025-11-24 18:10:12] 2025-11-24 23:09:38,999 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 18:10:12] 2025-11-24 23:09:39,003 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 18:10:12] 2025-11-24 23:09:39,005 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895367186/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,006 | INFO     | extracted standard info from prmon json
[2025-11-24 18:10:12] 2025-11-24 23:09:39,006 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:10:12] 2025-11-24 23:09:39,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:10:12] 2025-11-24 23:09:39,012 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:10:12] 2025-11-24 23:09:39,013 | INFO     | sum of square deviations: 23469063453.69278
[2025-11-24 18:10:12] 2025-11-24 23:09:39,017 | INFO     | sum of deviations: 416508340071.2385
[2025-11-24 18:10:12] 2025-11-24 23:09:39,017 | INFO     | mean x: 1764012843.2080379
[2025-11-24 18:10:12] 2025-11-24 23:09:39,017 | INFO     | mean y: 3421394.5768321515
[2025-11-24 18:10:12] 2025-11-24 23:09:39,017 | INFO     | intersect: -31302730324.626904
[2025-11-24 18:10:12] 2025-11-24 23:09:39,018 | INFO     | chi2: 5.0181171721328335
[2025-11-24 18:10:12] 2025-11-24 23:09:39,018 | INFO     | sum of square deviations: 22646646965.973606
[2025-11-24 18:10:12] 2025-11-24 23:09:39,022 | INFO     | sum of deviations: 560624072624.6576
[2025-11-24 18:10:12] 2025-11-24 23:09:39,022 | INFO     | mean x: 1764012690.7105262
[2025-11-24 18:10:12] 2025-11-24 23:09:39,022 | INFO     | mean y: 3448085.4186602873
[2025-11-24 18:10:12] 2025-11-24 23:09:39,022 | INFO     | intersect: -43665178900.00667
[2025-11-24 18:10:12] 2025-11-24 23:09:39,023 | INFO     | chi2: 2.5855042254861775
[2025-11-24 18:10:12] 2025-11-24 23:09:39,023 | INFO     | current chi2=2.5855042254861775 (change=48.47660712579038 %)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,023 | INFO     | sum of square deviations: 21843672703.24942
[2025-11-24 18:10:12] 2025-11-24 23:09:39,027 | INFO     | sum of deviations: 583423657781.1694
[2025-11-24 18:10:12] 2025-11-24 23:09:39,027 | INFO     | mean x: 1764012538.2130752
[2025-11-24 18:10:12] 2025-11-24 23:09:39,027 | INFO     | mean y: 3452372.338983051
[2025-11-24 18:10:12] 2025-11-24 23:09:39,027 | INFO     | intersect: -47111639553.709724
[2025-11-24 18:10:12] 2025-11-24 23:09:39,028 | INFO     | chi2: 2.3261734507615626
[2025-11-24 18:10:12] 2025-11-24 23:09:39,028 | INFO     | current chi2=2.3261734507615626 (change=10.03018181785607 %)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,028 | INFO     | right removable region: 412
[2025-11-24 18:10:12] 2025-11-24 23:09:39,028 | INFO     | sum of square deviations: 22646593285.97362
[2025-11-24 18:10:12] 2025-11-24 23:09:39,032 | INFO     | sum of deviations: 286396402803.00037
[2025-11-24 18:10:12] 2025-11-24 23:09:39,032 | INFO     | mean x: 1764012995.7105262
[2025-11-24 18:10:12] 2025-11-24 23:09:39,032 | INFO     | mean y: 3445433.5454545454
[2025-11-24 18:10:12] 2025-11-24 23:09:39,032 | INFO     | intersect: -22304853659.817245
[2025-11-24 18:10:12] 2025-11-24 23:09:39,033 | INFO     | chi2: 2.844419494659014
[2025-11-24 18:10:12] 2025-11-24 23:09:39,033 | INFO     | current chi2=2.844419494659014 (change=43.31699725038386 %)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,034 | INFO     | sum of square deviations: 21843591084.67313
[2025-11-24 18:10:12] 2025-11-24 23:09:39,037 | INFO     | sum of deviations: 254218503257.1503
[2025-11-24 18:10:12] 2025-11-24 23:09:39,037 | INFO     | mean x: 1764013148.2106538
[2025-11-24 18:10:12] 2025-11-24 23:09:39,037 | INFO     | mean y: 3451538.147699758
[2025-11-24 18:10:12] 2025-11-24 23:09:39,038 | INFO     | intersect: -20526358808.77386
[2025-11-24 18:10:12] 2025-11-24 23:09:39,038 | INFO     | chi2: 2.7973699426836753
[2025-11-24 18:10:12] 2025-11-24 23:09:39,038 | INFO     | current chi2=2.7973699426836753 (change=1.6541003204233389 %)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,038 | INFO     | left removable region: 20
[2025-11-24 18:10:12] 2025-11-24 23:09:39,039 | INFO     | sum of square deviations: 18678052386.691315
[2025-11-24 18:10:12] 2025-11-24 23:09:39,042 | INFO     | sum of deviations: 375350745565.6684
[2025-11-24 18:10:12] 2025-11-24 23:09:39,042 | INFO     | mean x: 1764013117.7219388
[2025-11-24 18:10:12] 2025-11-24 23:09:39,042 | INFO     | mean y: 3492542.0153061226
[2025-11-24 18:10:12] 2025-11-24 23:09:39,042 | INFO     | intersect: -35445794418.77791
[2025-11-24 18:10:12] 2025-11-24 23:09:39,043 | INFO     | chi2: 0.06502625404499555
[2025-11-24 18:10:12] 2025-11-24 23:09:39,043 | INFO     | current memory leak: 20.10 B/s (using 392 data points, chi2=0.07)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,043 | INFO     | could have reported an average CPU frequency of 2387 MHz (18 samples)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | ..............................
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . Timing measurements:
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . get job = 0 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . initial setup = 2 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . payload setup = 7 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . stage-in = 0 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . payload execution = 25794 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . stage-out = 3 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,044 | INFO     | . log creation = 0 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,045 | INFO     | ..............................
[2025-11-24 18:10:12] 2025-11-24 23:09:39,125 | INFO     | 
[2025-11-24 18:10:12] 2025-11-24 23:09:39,125 | INFO     | job summary report
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | --------------------------------------------------
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | PanDA job id: 6895367186
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | task id: 47556137
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | errors: (none)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | pilot state: finished 
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | transexitcode: 0
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | exeerrorcode: 0
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | exeerrordiag: 
[2025-11-24 18:10:12] 2025-11-24 23:09:39,126 | INFO     | exitcode: 0
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | exitmsg: OK
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | cpuconsumptiontime: 296344 s
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | nevents: 1000
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | neventsw: 0
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | pid: 24451
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | pgrp: 24451
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | corecount: 12
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | event service: False
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | sizes: {0: 2284259, 5: 2284521, 11: 2284577, 25804: 2321843, 25805: 2321842, 25809: 2330892, 25812: 2331076, 25819: 2331322}
[2025-11-24 18:10:12] 2025-11-24 23:09:39,127 | INFO     | --------------------------------------------------
[2025-11-24 18:10:12] 2025-11-24 23:09:39,128 | INFO     | 
[2025-11-24 18:10:12] 2025-11-24 23:09:39,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 18:10:12] 2025-11-24 23:09:39,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:10:12] 2025-11-24 23:09:39,282 | INFO     | job 6895367186 has completed (purged errors)
[2025-11-24 18:10:12] 2025-11-24 23:09:39,283 | INFO     | overall cleanup function is called
[2025-11-24 18:10:12] 2025-11-24 23:09:40,299 | INFO     | --- collectZombieJob: --- 10, [24451]
[2025-11-24 18:10:12] 2025-11-24 23:09:40,299 | INFO     | zombie collector waiting for pid 24451
[2025-11-24 18:10:12] 2025-11-24 23:09:40,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:10:12] 2025-11-24 23:09:40,299 | INFO     | collected zombie processes
[2025-11-24 18:10:12] 2025-11-24 23:09:40,300 | INFO     | will attempt to kill all subprocesses of pid=24451
[2025-11-24 18:10:12] 2025-11-24 23:09:40,390 | INFO     | process IDs to be killed: [24451] (in reverse order)
[2025-11-24 18:10:12] 2025-11-24 23:09:40,443 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:10:12] 2025-11-24 23:09:40,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:10:12] 2025-11-24 23:09:40,446 | INFO     | did not find any defunct processes belonging to 24451
[2025-11-24 18:10:12] 2025-11-24 23:09:40,450 | INFO     | did not find any defunct processes belonging to 24451
[2025-11-24 18:10:12] 2025-11-24 23:09:40,452 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:10:12] 2025-11-24 23:09:40,452 | INFO     | ready for new job
[2025-11-24 18:10:12] 2025-11-24 23:09:40,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:10:12] 2025-11-24 23:09:40,455 | INFO     | ***************************************
[2025-11-24 18:10:12] 2025-11-24 23:09:40,455 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:10:12] 2025-11-24 23:09:40,455 | INFO     | ***************************************
[2025-11-24 18:10:12] 2025-11-24 23:09:40,455 | INFO     | 
[2025-11-24 18:10:12] 2025-11-24 23:09:40,455 | INFO     | architecture information:
[2025-11-24 18:10:12] 2025-11-24 23:09:40,456 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:10:12] 2025-11-24 23:09:40,472 | INFO     | cat /etc/os-release:
[2025-11-24 18:10:12] NAME="CentOS Linux"
[2025-11-24 18:10:12] VERSION="7 (Core)"
[2025-11-24 18:10:12] ID="centos"
[2025-11-24 18:10:12] ID_LIKE="rhel fedora"
[2025-11-24 18:10:12] VERSION_ID="7"
[2025-11-24 18:10:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:10:12] ANSI_COLOR="0;31"
[2025-11-24 18:10:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:10:12] HOME_URL="https://www.centos.org/"
[2025-11-24 18:10:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:10:12] 
[2025-11-24 18:10:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:10:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:10:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:10:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:10:12] 
[2025-11-24 18:10:12] 2025-11-24 23:09:40,472 | INFO     | ***************************************
[2025-11-24 18:10:12] 2025-11-24 23:09:40,975 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 18:10:12] 2025-11-24 23:09:40,991 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-24 18:10:12] 2025-11-24 23:09:40,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:10:12] 2025-11-24 23:09:40,992 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:10:12] 2025-11-24 23:09:40,992 | INFO     | update_server=False
[2025-11-24 18:10:12] 2025-11-24 23:09:40,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:10:12] 2025-11-24 23:09:40,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:10:12] 2025-11-24 23:09:40,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:10:12] 2025-11-24 23:09:40,993 | INFO     | aborting loop
[2025-11-24 18:10:12] 2025-11-24 23:09:41,018 | INFO     | all job control threads have been joined
[2025-11-24 18:10:12] 2025-11-24 23:09:41,253 | INFO     | all payload control threads have been joined
[2025-11-24 18:10:12] 2025-11-24 23:09:41,993 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:41,998 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:41,999 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,019 | INFO     | all data control threads have been joined
[2025-11-24 18:10:12] 2025-11-24 23:09:42,023 | INFO     | [job] control thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,259 | INFO     | [payload] control thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:10:12] 2025-11-24 23:09:42,437 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,603 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:42,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:10:12] 2025-11-24 23:09:42,647 | INFO     | [job] validate thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:43,024 | INFO     | [data] control thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:43,065 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:43,232 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:43,299 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:43,491 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:44,266 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:45,465 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:10:12] 2025-11-24 23:09:46,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:10:12] 2025-11-24 23:09:48,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716851222336)>', '<ExcThread(monitor, started 139716250806016)>']
[2025-11-24 18:10:12] 2025-11-24 23:09:53,217 | INFO     | all workflow threads have been joined
[2025-11-24 18:10:12] 2025-11-24 23:09:53,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:10:12] 2025-11-24 23:09:53,217 | INFO     | traces error code: 0
[2025-11-24 18:10:12] 2025-11-24 23:09:53,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:10:12] 2025-11-24 23:10:11,858 | INFO     | PID=18023 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 18:10:12] 2025-11-24 23:10:11,860 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:10:12] 2025-11-24 23:10:11,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:10:12] 2025-11-24 23:10:11,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:10:12] 2025-11-24 23:10:11,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:10:12] 2025-11-24 23:10:11,860 | INFO     | [monitor] control thread has ended
[2025-11-24 18:10:12] 2025-11-24 23:10:11,950 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:10:12] 2025-11-24 23:10:11,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:10:12] 2025-11-24 23:10:11,958 [wrapper] pilotpid: 18023
[2025-11-24 18:10:12] 2025-11-24 23:10:11,961 [wrapper] Pilot exit status: 0
[2025-11-24 18:10:12] 2025-11-24 23:10:11,973 [wrapper] pandaids: 6895367186
[2025-11-24 18:10:12] 2025-11-24 23:10:12,006 [wrapper] cleanup supervisor_pilot 26904 18024
[2025-11-24 18:10:12] 2025-11-24 23:10:12,010 [wrapper] Test setup, not cleaning
[2025-11-24 18:10:12] 2025-11-24 23:10:12,014 [wrapper] apfmon messages muted
[2025-11-24 18:10:12] 2025-11-24 23:10:12,017 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:10:12] 2025-11-24 23:10:12,021 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:10:12]  *** Error codes and diagnostics ***
[2025-11-24 18:10:12]     "exeErrorCode": 0,
[2025-11-24 18:10:12]     "exeErrorDiag": "",
[2025-11-24 18:10:12]     "pilotErrorCode": 0,
[2025-11-24 18:10:12]     "pilotErrorDiag": "",
[2025-11-24 18:10:12]  *** Listing of results directory ***
[2025-11-24 18:10:12] total 1307380
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 14:00 queuedata.json
[2025-11-24 18:10:12] -rwx------ 1 boincer umatlas     36292 Nov 23 14:01 runpilot2-wrapper.sh
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:10:12] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:58 run_atlas
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:58 job.xml
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas 407884598 Nov 24 10:58 EVNT.47483658._000856.pool.root.1
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:58 start_atlas.sh
[2025-11-24 18:10:12] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:58 shared
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas    590105 Nov 24 10:58 input.tar.gz
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:58 boinc_lockfile
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:58 pandaJob.out
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas        57 Nov 24 10:58 setup.sh.local
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas    987541 Nov 24 10:59 agis_schedconf.cvmfs.json
[2025-11-24 18:10:12] drwx------ 5 boincer umatlas      4096 Nov 24 10:59 pilot3
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 18:00 init_data.xml
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas       533 Nov 24 18:00 boinc_task_state.xml
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas 915341573 Nov 24 18:08 HITS.47556137._008426.pool.root.1
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas      1061 Nov 24 18:09 memory_monitor_summary.json
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas   1516227 Nov 24 18:09 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas   2185914 Nov 24 18:09 log.47556137._008426.job.log.tgz.1
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas      8666 Nov 24 18:09 heartbeat.json
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas        29 Nov 24 18:10 wrapper_checkpoint.txt
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 18:10 boinc_mmap_file
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas        95 Nov 24 18:10 pilot_heartbeat.json
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas       745 Nov 24 18:10 pilotlog.txt
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas   3617009 Nov 24 18:10 log.47556137._008426.job.log.1
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas       353 Nov 24 18:10 output.list
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas       620 Nov 24 18:10 runtime_log
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas   5826560 Nov 24 18:10 result.tar.gz
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas       670 Nov 24 18:10 WN1KDmbWUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEhIKDmc2EEUn.diag
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 18:10 runtime_log.err
[2025-11-24 18:10:12] -rw-r--r-- 1 boincer umatlas     21343 Nov 24 18:10 stderr.txt
[2025-11-24 18:10:12] HITS file was successfully produced:
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas 915341573 Nov 24 18:08 shared/HITS.pool.root.1
[2025-11-24 18:10:12]  *** Contents of shared directory: ***
[2025-11-24 18:10:12] total 1298516
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas 407884598 Nov 24 10:58 ATLAS.root_0
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:58 start_atlas.sh
[2025-11-24 18:10:12] -rw-r--r-- 2 boincer umatlas    590105 Nov 24 10:58 input.tar.gz
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas 915341573 Nov 24 18:08 HITS.pool.root.1
[2025-11-24 18:10:12] -rw------- 1 boincer umatlas   5826560 Nov 24 18:10 result.tar.gz
18:10:14 (14319): run_atlas exited; CPU time 289600.524438
18:10:14 (14319): called boinc_finish(0)

</stderr_txt>
]]>

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