Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:04:06 (3212014): wrapper (7.7.26015): starting
08:04:06 (3212014): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 08:04:06] Arguments: --nthreads 2
[2025-11-27 08:04:06] Threads: 2
[2025-11-27 08:04:06] Checking for CVMFS
[2025-11-27 08:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:04:07] 2.9.2.0 1624889 12182 58740 153351 3 9 20616786 36864001 0 130560 1 3877190 99.926 601594 969 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 08:04:07] CVMFS is ok
[2025-11-27 08:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 08:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 08:04:07] Further information can be found at the LHC@home message board.
[2025-11-27 08:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:04:07] Checking for apptainer binary...
[2025-11-27 08:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:04:07] Running /usr/bin/apptainer --version
[2025-11-27 08:04:07] apptainer version 1.4.1-1.1
[2025-11-27 08:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:04:07] thA315
[2025-11-27 08:04:07] apptainer works
[2025-11-27 08:04:07] Set ATHENA_PROC_NUMBER=2
[2025-11-27 08:04:07] Set ATHENA_CORE_NUMBER=2
[2025-11-27 08:04:07] Starting ATLAS job with PandaID=6895366941
[2025-11-27 08:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:50:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:50:34] 
[2025-11-27 20:50:34] 2025-11-27 19:49:41,561 | INFO     | ***************************************
[2025-11-27 20:50:34] 2025-11-27 19:49:42,064 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | INFO     | sufficient remaining disk space (501037924352 B)
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | INFO     | update_server=False
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:50:34] 2025-11-27 19:49:42,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:50:34] 2025-11-27 19:49:42,077 | INFO     | aborting loop
[2025-11-27 20:50:34] 2025-11-27 19:49:42,295 | INFO     | all payload control threads have been joined
[2025-11-27 20:50:34] 2025-11-27 19:49:42,626 | INFO     | all data control threads have been joined
[2025-11-27 20:50:34] 2025-11-27 19:49:43,082 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:43,082 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:43,301 | INFO     | [payload] control thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:43,373 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:43,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:50:34] 2025-11-27 19:49:43,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:50:34] 2025-11-27 19:49:43,630 | INFO     | [data] control thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:43,639 | INFO     | all job control threads have been joined
[2025-11-27 20:50:34] 2025-11-27 19:49:44,063 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,148 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,281 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,372 | INFO     | [job] validate thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,420 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,578 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,645 | INFO     | [job] control thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:44,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:50:34] 2025-11-27 19:49:45,391 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:45,999 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:47,414 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:49:52,523 | INFO     | job.realtimelogging is not enabled
[2025-11-27 20:50:34] 2025-11-27 19:49:53,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:50:34] 2025-11-27 19:50:12,562 | INFO     | PID=3215731 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:50:34] 2025-11-27 19:50:12,562 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:50:34] 2025-11-27 19:50:12,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:50:34] 2025-11-27 19:50:12,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:50:34] 2025-11-27 19:50:27,084 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:50:34] 2025-11-27 19:50:28,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276216981312)>', '<ExcThread(monitor, started 140275460577024)>']
[2025-11-27 20:50:34] 2025-11-27 19:50:29,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:50:34] 2025-11-27 19:50:29,638 | INFO     | [monitor] control thread has ended
[2025-11-27 20:50:34] 2025-11-27 19:50:33,892 | INFO     | all workflow threads have been joined
[2025-11-27 20:50:34] 2025-11-27 19:50:33,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:50:34] 2025-11-27 19:50:33,893 | INFO     | traces error code: 0
[2025-11-27 20:50:34] 2025-11-27 19:50:33,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:50:34] 2025-11-27 19:50:33,940 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:50:34] 2025-11-27 19:50:33,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:50:34] 2025-11-27 19:50:33,944 [wrapper] pilotpid: 3215731
[2025-11-27 20:50:34] 2025-11-27 19:50:33,946 [wrapper] Pilot exit status: 0
[2025-11-27 20:50:34] 2025-11-27 19:50:33,951 [wrapper] pandaids: 6895366941
[2025-11-27 20:50:34] 2025-11-27 19:50:33,964 [wrapper] cleanup supervisor_pilot 3311336 3215732
[2025-11-27 20:50:34] 2025-11-27 19:50:33,966 [wrapper] Test setup, not cleaning
[2025-11-27 20:50:34] 2025-11-27 19:50:33,968 [wrapper] apfmon messages muted
[2025-11-27 20:50:34] 2025-11-27 19:50:33,970 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:50:34] 2025-11-27 19:50:33,971 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:50:34]  *** Error codes and diagnostics ***
[2025-11-27 20:50:34]     "exeErrorCode": 0,
[2025-11-27 20:50:34]     "exeErrorDiag": "",
[2025-11-27 20:50:34]     "pilotErrorCode": 0,
[2025-11-27 20:50:34]     "pilotErrorDiag": "",
[2025-11-27 20:50:34]  *** Listing of results directory ***
[2025-11-27 20:50:34] total 1324972
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc    576529 Nov 23 19:33 pilot3.tar.gz
[2025-11-27 20:50:34] -rwx------ 1 boinc boinc     36292 Nov 23 19:52 runpilot2-wrapper.sh
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      5112 Nov 23 19:52 queuedata.json
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc       100 Nov 27 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:50:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 08:04 run_atlas
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc       105 Nov 27 08:04 job.xml
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc 411889194 Nov 27 08:04 EVNT.47483658._000852.pool.root.1
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc    590099 Nov 27 08:04 input.tar.gz
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:04 start_atlas.sh
[2025-11-27 20:50:34] drwxrwx--x 2 boinc boinc      4096 Nov 27 08:04 shared
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:04 boinc_setup_complete
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      6207 Nov 27 08:04 init_data.xml
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc         0 Nov 27 08:04 boinc_lockfile
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      2786 Nov 27 08:04 pandaJob.out
[2025-11-27 20:50:34] -rw------- 1 boinc boinc    991554 Nov 27 08:04 agis_schedconf.cvmfs.json
[2025-11-27 20:50:34] drwx------ 5 boinc boinc      4096 Nov 27 08:04 pilot3
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc       531 Nov 27 20:46 boinc_task_state.xml
[2025-11-27 20:50:34] -rw------- 1 boinc boinc 925600618 Nov 27 20:49 HITS.47556137._008384.pool.root.1
[2025-11-27 20:50:34] -rw------- 1 boinc boinc      1022 Nov 27 20:49 memory_monitor_summary.json
[2025-11-27 20:50:34] -rw------- 1 boinc boinc   1516240 Nov 27 20:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:50:34] -rw------- 1 boinc boinc   1245969 Nov 27 20:49 log.47556137._008384.job.log.tgz.1
[2025-11-27 20:50:34] -rw------- 1 boinc boinc      8556 Nov 27 20:49 heartbeat.json
[2025-11-27 20:50:34] -rw------- 1 boinc boinc        95 Nov 27 20:50 pilot_heartbeat.json
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc        28 Nov 27 20:50 wrapper_checkpoint.txt
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      8192 Nov 27 20:50 boinc_mmap_file
[2025-11-27 20:50:34] -rw------- 1 boinc boinc      4824 Nov 27 20:50 pilotlog.txt
[2025-11-27 20:50:34] -rw------- 1 boinc boinc   6442103 Nov 27 20:50 log.47556137._008384.job.log.1
[2025-11-27 20:50:34] -rw------- 1 boinc boinc       353 Nov 27 20:50 output.list
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc       620 Nov 27 20:50 runtime_log
[2025-11-27 20:50:34] -rw------- 1 boinc boinc   7710720 Nov 27 20:50 result.tar.gz
[2025-11-27 20:50:34] -rw------- 1 boinc boinc       665 Nov 27 20:50 vYsLDmnNUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK7KKDmh7wwWn.diag
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      8898 Nov 27 20:50 runtime_log.err
[2025-11-27 20:50:34] -rw-r--r-- 1 boinc boinc      8078 Nov 27 20:50 stderr.txt
[2025-11-27 20:50:34] HITS file was successfully produced:
[2025-11-27 20:50:34] -rw------- 1 boinc boinc 925600618 Nov 27 20:49 shared/HITS.pool.root.1
[2025-11-27 20:50:34]  *** Contents of shared directory: ***
[2025-11-27 20:50:34] total 1314280
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc 411889194 Nov 27 08:04 ATLAS.root_0
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc    590099 Nov 27 08:04 input.tar.gz
[2025-11-27 20:50:34] -rw-r--r-- 2 boinc boinc     15847 Nov 27 08:04 start_atlas.sh
[2025-11-27 20:50:34] -rw------- 1 boinc boinc 925600618 Nov 27 20:49 HITS.pool.root.1
[2025-11-27 20:50:34] -rw------- 1 boinc boinc   7710720 Nov 27 20:50 result.tar.gz
20:50:35 (3212014): run_atlas exited; CPU time 91145.809747
20:50:35 (3212014): called boinc_finish(0)

</stderr_txt>
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