Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:03:54 (1541304): wrapper (7.7.26015): starting
08:03:54 (1541304): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 08:03:54] Arguments: --nthreads 12
[2025-11-25 08:03:54] Threads: 12
[2025-11-25 08:03:54] Checking for CVMFS
[2025-11-25 08:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:03:55] 2.13.3.0 9330 25459 303244 153273 2 90 38918191 46080000 7318 130560 0 147925638 99.899 42110454 27533 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-25 08:03:55] CVMFS is ok
[2025-11-25 08:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:03:55] Further information can be found at the LHC@home message board.
[2025-11-25 08:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:03:55] Checking for apptainer binary...
[2025-11-25 08:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:03:55] Running /usr/bin/apptainer --version
[2025-11-25 08:03:55] apptainer version 1.4.3-1.el9
[2025-11-25 08:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:03:55] mff2102.farm.particle.cz
[2025-11-25 08:03:55] apptainer works
[2025-11-25 08:03:55] Set ATHENA_PROC_NUMBER=12
[2025-11-25 08:03:55] Set ATHENA_CORE_NUMBER=12
[2025-11-25 08:03:55] Starting ATLAS job with PandaID=6895355497
[2025-11-25 08:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:36:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:36:56] 2025-11-25 12:36:21,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:36:56] 2025-11-25 12:36:22,949 | INFO     | time since job start (19934s) is within the limit (172800.0s)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,294 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 13:36:56] 2025-11-25 12:36:23,310 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2738.6069375
[2025-11-25 13:36:56] 2025-11-25 12:36:23,328 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6895355497/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,329 | INFO     | extracted standard info from prmon json
[2025-11-25 13:36:56] 2025-11-25 12:36:23,329 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:36:56] 2025-11-25 12:36:23,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:36:56] 2025-11-25 12:36:23,335 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:36:56] 2025-11-25 12:36:23,336 | INFO     | sum of square deviations: 10842156488.996937
[2025-11-25 13:36:56] 2025-11-25 12:36:23,339 | INFO     | sum of deviations: 231713589214.5354
[2025-11-25 13:36:56] 2025-11-25 12:36:23,339 | INFO     | mean x: 1764064224.0030582
[2025-11-25 13:36:56] 2025-11-25 12:36:23,339 | INFO     | mean y: 3428106.4648318044
[2025-11-25 13:36:56] 2025-11-25 12:36:23,339 | INFO     | intersect: -37697342341.14185
[2025-11-25 13:36:56] 2025-11-25 12:36:23,339 | INFO     | chi2: 6.089754837061679
[2025-11-25 13:36:56] 2025-11-25 12:36:23,340 | INFO     | sum of square deviations: 10352470596.388187
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | sum of deviations: 364685370114.646
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | mean x: 1764064071.5186336
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | mean y: 3469445.5590062113
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | intersect: -62139026187.52875
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | chi2: 2.615844839536138
[2025-11-25 13:36:56] 2025-11-25 12:36:23,343 | INFO     | current chi2=2.615844839536138 (change=57.04515354844253 %)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,344 | INFO     | sum of square deviations: 9877683408.845423
[2025-11-25 13:36:56] 2025-11-25 12:36:23,346 | INFO     | sum of deviations: 379410188362.5805
[2025-11-25 13:36:56] 2025-11-25 12:36:23,346 | INFO     | mean x: 1764063919.022082
[2025-11-25 13:36:56] 2025-11-25 12:36:23,346 | INFO     | mean y: 3474099.0599369085
[2025-11-25 13:36:56] 2025-11-25 12:36:23,347 | INFO     | intersect: -67755715591.15037
[2025-11-25 13:36:56] 2025-11-25 12:36:23,347 | INFO     | chi2: 2.3599879588381754
[2025-11-25 13:36:56] 2025-11-25 12:36:23,347 | INFO     | current chi2=2.3599879588381754 (change=9.78104193455653 %)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,347 | INFO     | right removable region: 316
[2025-11-25 13:36:56] 2025-11-25 12:36:23,348 | INFO     | sum of square deviations: 10352310046.450352
[2025-11-25 13:36:56] 2025-11-25 12:36:23,350 | INFO     | sum of deviations: 126845477693.0094
[2025-11-25 13:36:56] 2025-11-25 12:36:23,350 | INFO     | mean x: 1764064376.5124223
[2025-11-25 13:36:56] 2025-11-25 12:36:23,351 | INFO     | mean y: 3460624.8726708074
[2025-11-25 13:36:56] 2025-11-25 12:36:23,351 | INFO     | intersect: -21611385483.47627
[2025-11-25 13:36:56] 2025-11-25 12:36:23,351 | INFO     | chi2: 3.9209057454555363
[2025-11-25 13:36:56] 2025-11-25 12:36:23,351 | INFO     | current chi2=3.9209057454555363 (change=35.614719305393535 %)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,352 | INFO     | sum of square deviations: 9877499923.949482
[2025-11-25 13:36:56] 2025-11-25 12:36:23,354 | INFO     | sum of deviations: 99573269570.38785
[2025-11-25 13:36:56] 2025-11-25 12:36:23,354 | INFO     | mean x: 1764064529.0126183
[2025-11-25 13:36:56] 2025-11-25 12:36:23,354 | INFO     | mean y: 3469371.6529968455
[2025-11-25 13:36:56] 2025-11-25 12:36:23,354 | INFO     | intersect: -17779742396.44168
[2025-11-25 13:36:56] 2025-11-25 12:36:23,355 | INFO     | chi2: 3.8551787998142815
[2025-11-25 13:36:56] 2025-11-25 12:36:23,355 | INFO     | current chi2=3.8551787998142815 (change=1.6763204705299173 %)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,355 | INFO     | left removable region: 20
[2025-11-25 13:36:56] 2025-11-25 12:36:23,355 | INFO     | sum of square deviations: 8041717605.662175
[2025-11-25 13:36:56] 2025-11-25 12:36:23,358 | INFO     | sum of deviations: 206138215174.81085
[2025-11-25 13:36:56] 2025-11-25 12:36:23,358 | INFO     | mean x: 1764064498.5337837
[2025-11-25 13:36:56] 2025-11-25 12:36:23,358 | INFO     | mean y: 3531672.918918919
[2025-11-25 13:36:56] 2025-11-25 12:36:23,358 | INFO     | intersect: -45215801436.33651
[2025-11-25 13:36:56] 2025-11-25 12:36:23,359 | INFO     | chi2: 0.03942165182536181
[2025-11-25 13:36:56] 2025-11-25 12:36:23,359 | INFO     | current memory leak: 25.63 B/s (using 296 data points, chi2=0.04)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,359 | INFO     | could have reported an average CPU frequency of 2728 MHz (14 samples)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,359 | INFO     | ..............................
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . Timing measurements:
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . get job = 0 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . initial setup = 1 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . payload setup = 7 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . stage-in = 0 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . payload execution = 19892 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . stage-out = 2 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | . log creation = 0 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,360 | INFO     | ..............................
[2025-11-25 13:36:56] 2025-11-25 12:36:23,458 | INFO     | 
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | job summary report
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | --------------------------------------------------
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | PanDA job id: 6895355497
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | task id: 47556137
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | errors: (none)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | pilot state: finished 
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | transexitcode: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:23,459 | INFO     | exeerrorcode: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | exeerrordiag: 
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | exitcode: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | exitmsg: OK
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | cpuconsumptiontime: 228104 s
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | nevents: 1000
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | neventsw: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | pid: 1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | pgrp: 1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | corecount: 12
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | event service: False
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | sizes: {0: 2284310, 6: 2284572, 11: 2284600, 19903: 2319113, 19907: 2328114, 19909: 2328170, 19917: 2328544}
[2025-11-25 13:36:56] 2025-11-25 12:36:23,460 | INFO     | --------------------------------------------------
[2025-11-25 13:36:56] 2025-11-25 12:36:23,461 | INFO     | 
[2025-11-25 13:36:56] 2025-11-25 12:36:23,461 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-11-25 13:36:56] 2025-11-25 12:36:23,485 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:36:56] 2025-11-25 12:36:23,488 | INFO     | job 6895355497 has completed (purged errors)
[2025-11-25 13:36:56] 2025-11-25 12:36:23,488 | INFO     | overall cleanup function is called
[2025-11-25 13:36:56] 2025-11-25 12:36:24,511 | INFO     | --- collectZombieJob: --- 10, [1554711]
[2025-11-25 13:36:56] 2025-11-25 12:36:24,511 | INFO     | zombie collector waiting for pid 1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:24,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:36:56] 2025-11-25 12:36:24,511 | INFO     | collected zombie processes
[2025-11-25 13:36:56] 2025-11-25 12:36:24,511 | INFO     | will attempt to kill all subprocesses of pid=1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:24,897 | INFO     | process IDs to be killed: [1554711] (in reverse order)
[2025-11-25 13:36:56] 2025-11-25 12:36:25,026 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:36:56] 2025-11-25 12:36:25,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:36:56] 2025-11-25 12:36:25,039 | INFO     | did not find any defunct processes belonging to 1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:25,050 | INFO     | did not find any defunct processes belonging to 1554711
[2025-11-25 13:36:56] 2025-11-25 12:36:25,051 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:36:56] 2025-11-25 12:36:25,051 | INFO     | ready for new job
[2025-11-25 13:36:56] 2025-11-25 12:36:25,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:36:56] 2025-11-25 12:36:25,054 | INFO     | ***************************************
[2025-11-25 13:36:56] 2025-11-25 12:36:25,055 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:36:56] 2025-11-25 12:36:25,055 | INFO     | ***************************************
[2025-11-25 13:36:56] 2025-11-25 12:36:25,055 | INFO     | 
[2025-11-25 13:36:56] 2025-11-25 12:36:25,061 | INFO     | architecture information:
[2025-11-25 13:36:56] 2025-11-25 12:36:25,061 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:36:56] 2025-11-25 12:36:25,082 | INFO     | cat /etc/os-release:
[2025-11-25 13:36:56] NAME="CentOS Linux"
[2025-11-25 13:36:56] VERSION="7 (Core)"
[2025-11-25 13:36:56] ID="centos"
[2025-11-25 13:36:56] ID_LIKE="rhel fedora"
[2025-11-25 13:36:56] VERSION_ID="7"
[2025-11-25 13:36:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:36:56] ANSI_COLOR="0;31"
[2025-11-25 13:36:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:36:56] HOME_URL="https://www.centos.org/"
[2025-11-25 13:36:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:36:56] 
[2025-11-25 13:36:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:36:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:36:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:36:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:36:56] 
[2025-11-25 13:36:56] 2025-11-25 12:36:25,082 | INFO     | ***************************************
[2025-11-25 13:36:56] 2025-11-25 12:36:25,585 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-11-25 13:36:56] 2025-11-25 12:36:25,608 | INFO     | sufficient remaining disk space (1675232280576 B)
[2025-11-25 13:36:56] 2025-11-25 12:36:25,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:36:56] 2025-11-25 12:36:25,609 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:36:56] 2025-11-25 12:36:25,609 | INFO     | update_server=False
[2025-11-25 13:36:56] 2025-11-25 12:36:25,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:36:56] 2025-11-25 12:36:25,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:36:56] 2025-11-25 12:36:25,609 | INFO     | aborting loop
[2025-11-25 13:36:56] 2025-11-25 12:36:25,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:36:56] 2025-11-25 12:36:26,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:36:56] 2025-11-25 12:36:26,280 | INFO     | all payload control threads have been joined
[2025-11-25 13:36:56] 2025-11-25 12:36:26,379 | INFO     | all data control threads have been joined
[2025-11-25 13:36:56] 2025-11-25 12:36:26,396 | INFO     | all job control threads have been joined
[2025-11-25 13:36:56] 2025-11-25 12:36:26,612 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:26,614 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:26,956 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:26,957 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:26,966 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,286 | INFO     | [payload] control thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,385 | INFO     | [data] control thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,402 | INFO     | [job] control thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,781 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,854 | INFO     | [job] validate thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,881 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:27,944 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:28,175 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:28,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:36:56] 2025-11-25 12:36:29,469 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:30,060 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:36,294 | INFO     | job.realtimelogging is not enabled
[2025-11-25 13:36:56] 2025-11-25 12:36:37,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:36:56] 2025-11-25 12:36:41,433 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:36:56] 2025-11-25 12:36:42,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444976342848)>', '<ExcThread(monitor, started 140444356835072)>']
[2025-11-25 13:36:56] 2025-11-25 12:36:47,463 | INFO     | all workflow threads have been joined
[2025-11-25 13:36:56] 2025-11-25 12:36:47,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:36:56] 2025-11-25 12:36:47,464 | INFO     | traces error code: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:47,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:36:56] 2025-11-25 12:36:56,483 | INFO     | PID=1545403 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:36:56] 2025-11-25 12:36:56,483 | INFO     | .. there are 8 such processes running
[2025-11-25 13:36:56] 2025-11-25 12:36:56,484 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:36:56] 2025-11-25 12:36:56,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:36:56] 2025-11-25 12:36:56,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:36:56] 2025-11-25 12:36:56,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:36:56] 2025-11-25 12:36:56,484 | INFO     | [monitor] control thread has ended
[2025-11-25 13:36:56] 2025-11-25 12:36:56,641 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:36:56] 2025-11-25 12:36:56,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:36:56] 2025-11-25 12:36:56,649 [wrapper] pilotpid: 1545403
[2025-11-25 13:36:56] 2025-11-25 12:36:56,652 [wrapper] Pilot exit status: 0
[2025-11-25 13:36:56] 2025-11-25 12:36:56,666 [wrapper] pandaids: 6895355497
[2025-11-25 13:36:56] 2025-11-25 12:36:56,745 [wrapper] cleanup supervisor_pilot 2035494 1545404
[2025-11-25 13:36:56] 2025-11-25 12:36:56,748 [wrapper] Test setup, not cleaning
[2025-11-25 13:36:56] 2025-11-25 12:36:56,751 [wrapper] apfmon messages muted
[2025-11-25 13:36:56] 2025-11-25 12:36:56,754 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:36:56] 2025-11-25 12:36:56,757 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:36:56]  *** Error codes and diagnostics ***
[2025-11-25 13:36:56]     "exeErrorCode": 0,
[2025-11-25 13:36:56]     "exeErrorDiag": "",
[2025-11-25 13:36:56]     "pilotErrorCode": 0,
[2025-11-25 13:36:56]     "pilotErrorDiag": "",
[2025-11-25 13:36:56]  *** Listing of results directory ***
[2025-11-25 13:36:56] total 1315280
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc    576529 Nov 23 08:37 pilot3.tar.gz
[2025-11-25 13:36:56] -rwx------ 1 boinc boinc     36292 Nov 23 08:39 runpilot2-wrapper.sh
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc      5112 Nov 23 08:39 queuedata.json
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc       100 Nov 25 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:36:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 08:03 run_atlas
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc       105 Nov 25 08:03 job.xml
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc      6665 Nov 25 08:03 init_data.xml
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc 409921109 Nov 25 08:03 EVNT.47483658._000662.pool.root.1
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc    590095 Nov 25 08:03 input.tar.gz
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:03 start_atlas.sh
[2025-11-25 13:36:56] drwxrwx--x 2 boinc boinc      4096 Nov 25 08:03 shared
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:03 boinc_lockfile
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc      2785 Nov 25 08:03 pandaJob.out
[2025-11-25 13:36:56] -rw------- 1 boinc boinc    991801 Nov 25 08:04 agis_schedconf.cvmfs.json
[2025-11-25 13:36:56] drwx------ 5 boinc boinc      4096 Nov 25 08:04 pilot3
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc       533 Nov 25 13:28 boinc_task_state.xml
[2025-11-25 13:36:56] -rw------- 1 boinc boinc 923299775 Nov 25 13:35 HITS.47556137._006574.pool.root.1
[2025-11-25 13:36:56] -rw------- 1 boinc boinc        95 Nov 25 13:35 pilot_heartbeat.json
[2025-11-25 13:36:56] -rw------- 1 boinc boinc      1035 Nov 25 13:36 memory_monitor_summary.json
[2025-11-25 13:36:56] -rw------- 1 boinc boinc   1516240 Nov 25 13:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:36:56] -rw------- 1 boinc boinc   2078849 Nov 25 13:36 log.47556137._006574.job.log.tgz.1
[2025-11-25 13:36:56] -rw------- 1 boinc boinc      8609 Nov 25 13:36 heartbeat.json
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc        29 Nov 25 13:36 wrapper_checkpoint.txt
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc      8192 Nov 25 13:36 boinc_mmap_file
[2025-11-25 13:36:56] -rw------- 1 boinc boinc       822 Nov 25 13:36 pilotlog.txt
[2025-11-25 13:36:56] -rw------- 1 boinc boinc   2779900 Nov 25 13:36 log.47556137._006574.job.log.1
[2025-11-25 13:36:56] -rw------- 1 boinc boinc       353 Nov 25 13:36 output.list
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc       620 Nov 25 13:36 runtime_log
[2025-11-25 13:36:56] -rw------- 1 boinc boinc   4874240 Nov 25 13:36 result.tar.gz
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc      8881 Nov 25 13:36 runtime_log.err
[2025-11-25 13:36:56] -rw------- 1 boinc boinc       671 Nov 25 13:36 0t7KDmYsJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSjKKDmIhTYFn.diag
[2025-11-25 13:36:56] -rw-r--r-- 1 boinc boinc     21318 Nov 25 13:36 stderr.txt
[2025-11-25 13:36:56] HITS file was successfully produced:
[2025-11-25 13:36:56] -rw------- 1 boinc boinc 923299775 Nov 25 13:35 shared/HITS.pool.root.1
[2025-11-25 13:36:56]  *** Contents of shared directory: ***
[2025-11-25 13:36:56] total 1307340
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc 409921109 Nov 25 08:03 ATLAS.root_0
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc    590095 Nov 25 08:03 input.tar.gz
[2025-11-25 13:36:56] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:03 start_atlas.sh
[2025-11-25 13:36:56] -rw------- 1 boinc boinc 923299775 Nov 25 13:35 HITS.pool.root.1
[2025-11-25 13:36:56] -rw------- 1 boinc boinc   4874240 Nov 25 13:36 result.tar.gz
13:36:58 (1541304): run_atlas exited; CPU time 228064.144970
13:36:58 (1541304): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN