Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:39 (11530): wrapper (7.7.26015): starting
10:58:39 (11530): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 10:58:39] Arguments: --nthreads 8
[2025-11-24 10:58:39] Threads: 8
[2025-11-24 10:58:39] Checking for CVMFS
[2025-11-24 10:58:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:58:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:58:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:58:39] 2.11.2.0 16446 114994 136768 153250 2 82 16037743 18432000 1885 130560 0 82175769 99.974 4778571 30126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:58:39] CVMFS is ok
[2025-11-24 10:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:58:39] Further information can be found at the LHC@home message board.
[2025-11-24 10:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:58:39] Checking for apptainer binary...
[2025-11-24 10:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:58:39] Running /usr/bin/apptainer --version
[2025-11-24 10:58:39] apptainer version 1.3.2-1.el7
[2025-11-24 10:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:58:40] c-206-26.aglt2.org
[2025-11-24 10:58:40] apptainer works
[2025-11-24 10:58:40] Set ATHENA_PROC_NUMBER=8
[2025-11-24 10:58:40] Set ATHENA_CORE_NUMBER=8
[2025-11-24 10:58:40] Starting ATLAS job with PandaID=6891569898
[2025-11-24 10:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:21:53]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:21:53] 2025-11-25 11:21:20,694 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.2083333333335
[2025-11-25 06:21:53] 2025-11-25 11:21:20,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891569898/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,697 | INFO     | extracted standard info from prmon json
[2025-11-25 06:21:53] 2025-11-25 11:21:20,697 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:21:53] 2025-11-25 11:21:20,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:21:53] 2025-11-25 11:21:20,712 | INFO     | fitting pss+swap vs Time
[2025-11-25 06:21:53] 2025-11-25 11:21:20,713 | INFO     | sum of square deviations: 463039473717.74976
[2025-11-25 06:21:53] 2025-11-25 11:21:20,742 | INFO     | sum of deviations: 2171260279719.2473
[2025-11-25 06:21:53] 2025-11-25 11:21:20,742 | INFO     | mean x: 1764034789.6106737
[2025-11-25 06:21:53] 2025-11-25 11:21:20,742 | INFO     | mean y: 2880710.816272966
[2025-11-25 06:21:53] 2025-11-25 11:21:20,742 | INFO     | intersect: -8268938190.436362
[2025-11-25 06:21:53] 2025-11-25 11:21:20,743 | INFO     | chi2: 5.399097874924588
[2025-11-25 06:21:53] 2025-11-25 11:21:20,744 | INFO     | sum of square deviations: 456989610378.3764
[2025-11-25 06:21:53] 2025-11-25 11:21:20,772 | INFO     | sum of deviations: 2515864107802.926
[2025-11-25 06:21:53] 2025-11-25 11:21:20,772 | INFO     | mean x: 1764034637.1133568
[2025-11-25 06:21:53] 2025-11-25 11:21:20,772 | INFO     | mean y: 2889395.3339191563
[2025-11-25 06:21:53] 2025-11-25 11:21:20,772 | INFO     | intersect: -9708647426.608349
[2025-11-25 06:21:53] 2025-11-25 11:21:20,773 | INFO     | chi2: 2.767899249295183
[2025-11-25 06:21:53] 2025-11-25 11:21:20,773 | INFO     | current chi2=2.767899249295183 (change=48.73404199337943 %)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,774 | INFO     | sum of square deviations: 450992678263.9872
[2025-11-25 06:21:53] 2025-11-25 11:21:20,812 | INFO     | sum of deviations: 2639098772731.577
[2025-11-25 06:21:53] 2025-11-25 11:21:20,812 | INFO     | mean x: 1764034484.6160636
[2025-11-25 06:21:53] 2025-11-25 11:21:20,812 | INFO     | mean y: 2892526.5507502207
[2025-11-25 06:21:53] 2025-11-25 11:21:20,812 | INFO     | intersect: -10319805529.93826
[2025-11-25 06:21:53] 2025-11-25 11:21:20,814 | INFO     | chi2: 2.3047649402809856
[2025-11-25 06:21:53] 2025-11-25 11:21:20,814 | INFO     | current chi2=2.3047649402809856 (change=16.73233984698431 %)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,814 | INFO     | right removable region: 1132
[2025-11-25 06:21:53] 2025-11-25 11:21:20,816 | INFO     | sum of square deviations: 456989254077.6028
[2025-11-25 06:21:53] 2025-11-25 11:21:20,816 | INFO     | monitor loop #4972: job 0:6891569898 is in state 'finished'
[2025-11-25 06:21:53] 2025-11-25 11:21:20,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,847 | INFO     | sum of deviations: 1881000881144.3306
[2025-11-25 06:21:53] 2025-11-25 11:21:20,847 | INFO     | mean x: 1764034942.112478
[2025-11-25 06:21:53] 2025-11-25 11:21:20,848 | INFO     | mean y: 2888018.216168717
[2025-11-25 06:21:53] 2025-11-25 11:21:20,848 | INFO     | intersect: -7258007617.459969
[2025-11-25 06:21:53] 2025-11-25 11:21:20,849 | INFO     | chi2: 3.4255705414954125
[2025-11-25 06:21:53] 2025-11-25 11:21:20,849 | INFO     | current chi2=3.4255705414954125 (change=36.55290900716892 %)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,850 | INFO     | sum of square deviations: 450992034958.6765
[2025-11-25 06:21:53] 2025-11-25 11:21:20,874 | INFO     | sum of deviations: 1808943266166.8887
[2025-11-25 06:21:53] 2025-11-25 11:21:20,874 | INFO     | mean x: 1764035094.6134157
[2025-11-25 06:21:53] 2025-11-25 11:21:20,874 | INFO     | mean y: 2889850.1915269196
[2025-11-25 06:21:53] 2025-11-25 11:21:20,874 | INFO     | intersect: -7072710511.520841
[2025-11-25 06:21:53] 2025-11-25 11:21:20,875 | INFO     | chi2: 3.3805301242853902
[2025-11-25 06:21:53] 2025-11-25 11:21:20,876 | INFO     | current chi2=3.3805301242853902 (change=1.3148296514238516 %)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,876 | INFO     | left removable region: 20
[2025-11-25 06:21:53] 2025-11-25 11:21:20,877 | INFO     | sum of square deviations: 426377101268.61066
[2025-11-25 06:21:53] 2025-11-25 11:21:20,899 | INFO     | sum of deviations: 2179576798671.8372
[2025-11-25 06:21:53] 2025-11-25 11:21:20,899 | INFO     | mean x: 1764035064.121403
[2025-11-25 06:21:53] 2025-11-25 11:21:20,899 | INFO     | mean y: 2904820.334532374
[2025-11-25 06:21:53] 2025-11-25 11:21:20,899 | INFO     | intersect: -9014582015.527235
[2025-11-25 06:21:53] 2025-11-25 11:21:20,900 | INFO     | chi2: 0.23173483132463996
[2025-11-25 06:21:53] 2025-11-25 11:21:20,900 | INFO     | current memory leak: 5.11 B/s (using 1112 data points, chi2=0.23)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,901 | INFO     | could have reported an average CPU frequency of 2622 MHz (41 samples)
[2025-11-25 06:21:53] 2025-11-25 11:21:20,901 | INFO     | ..............................
[2025-11-25 06:21:53] 2025-11-25 11:21:20,901 | INFO     | . Timing measurements:
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . get job = 0 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . initial setup = 2 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . payload setup = 5 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . stage-in = 0 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . payload execution = 69715 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,902 | INFO     | . stage-out = 4 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,903 | INFO     | . log creation = 0 s
[2025-11-25 06:21:53] 2025-11-25 11:21:20,903 | INFO     | ..............................
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | 
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | job summary report
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | --------------------------------------------------
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | PanDA job id: 6891569898
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | task id: 47493068
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | errors: (none)
[2025-11-25 06:21:53] 2025-11-25 11:21:21,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | pilot state: finished 
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | transexitcode: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | exeerrorcode: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | exeerrordiag: 
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | exitcode: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | exitmsg: OK
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | cpuconsumptiontime: 536571 s
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | nevents: 1000
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | neventsw: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:21,044 | INFO     | pid: 22472
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | pgrp: 22472
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | corecount: 8
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | event service: False
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | sizes: {0: 2284128, 1: 2284327, 4: 2284589, 12: 2284617, 69724: 2340921, 69725: 2340920, 69730: 2350159, 69734: 2350445}
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | --------------------------------------------------
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | 
[2025-11-25 06:21:53] 2025-11-25 11:21:21,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 06:21:53] 2025-11-25 11:21:21,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:21:53] 2025-11-25 11:21:21,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:21:53] 2025-11-25 11:21:21,062 | INFO     | job 6891569898 has completed (purged errors)
[2025-11-25 06:21:53] 2025-11-25 11:21:21,062 | INFO     | overall cleanup function is called
[2025-11-25 06:21:53] 2025-11-25 11:21:22,074 | INFO     | --- collectZombieJob: --- 10, [22472]
[2025-11-25 06:21:53] 2025-11-25 11:21:22,075 | INFO     | zombie collector waiting for pid 22472
[2025-11-25 06:21:53] 2025-11-25 11:21:22,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:21:53] 2025-11-25 11:21:22,075 | INFO     | collected zombie processes
[2025-11-25 06:21:53] 2025-11-25 11:21:22,075 | INFO     | will attempt to kill all subprocesses of pid=22472
[2025-11-25 06:21:53] 2025-11-25 11:21:22,249 | INFO     | process IDs to be killed: [22472] (in reverse order)
[2025-11-25 06:21:53] 2025-11-25 11:21:22,310 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:21:53] 2025-11-25 11:21:22,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:21:53] 2025-11-25 11:21:22,316 | INFO     | did not find any defunct processes belonging to 22472
[2025-11-25 06:21:53] 2025-11-25 11:21:22,321 | INFO     | did not find any defunct processes belonging to 22472
[2025-11-25 06:21:53] 2025-11-25 11:21:22,323 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:21:53] 2025-11-25 11:21:22,324 | INFO     | ready for new job
[2025-11-25 06:21:53] 2025-11-25 11:21:22,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:21:53] 2025-11-25 11:21:22,329 | INFO     | ***************************************
[2025-11-25 06:21:53] 2025-11-25 11:21:22,329 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:21:53] 2025-11-25 11:21:22,329 | INFO     | ***************************************
[2025-11-25 06:21:53] 2025-11-25 11:21:22,329 | INFO     | 
[2025-11-25 06:21:53] 2025-11-25 11:21:22,331 | INFO     | architecture information:
[2025-11-25 06:21:53] 2025-11-25 11:21:22,331 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:21:53] 2025-11-25 11:21:22,345 | INFO     | cat /etc/os-release:
[2025-11-25 06:21:53] NAME="CentOS Linux"
[2025-11-25 06:21:53] VERSION="7 (Core)"
[2025-11-25 06:21:53] ID="centos"
[2025-11-25 06:21:53] ID_LIKE="rhel fedora"
[2025-11-25 06:21:53] VERSION_ID="7"
[2025-11-25 06:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:21:53] ANSI_COLOR="0;31"
[2025-11-25 06:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:21:53] HOME_URL="https://www.centos.org/"
[2025-11-25 06:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:21:53] 
[2025-11-25 06:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:21:53] 
[2025-11-25 06:21:53] 2025-11-25 11:21:22,346 | INFO     | ***************************************
[2025-11-25 06:21:53] 2025-11-25 11:21:22,851 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 06:21:53] 2025-11-25 11:21:22,864 | INFO     | sufficient remaining disk space (24940380160 B)
[2025-11-25 06:21:53] 2025-11-25 11:21:22,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:21:53] 2025-11-25 11:21:22,864 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:21:53] 2025-11-25 11:21:22,864 | INFO     | update_server=False
[2025-11-25 06:21:53] 2025-11-25 11:21:22,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:21:53] 2025-11-25 11:21:22,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:21:53] 2025-11-25 11:21:22,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:21:53] 2025-11-25 11:21:22,903 | INFO     | all job control threads have been joined
[2025-11-25 06:21:53] 2025-11-25 11:21:23,188 | INFO     | all data control threads have been joined
[2025-11-25 06:21:53] 2025-11-25 11:21:23,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:21:53] 2025-11-25 11:21:23,336 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 06:21:53] 2025-11-25 11:21:23,336 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 06:21:53] 2025-11-25 11:21:23,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:21:53] 2025-11-25 11:21:23,337 | INFO     | will abort loop
[2025-11-25 06:21:53] 2025-11-25 11:21:23,863 | INFO     | all payload control threads have been joined
[2025-11-25 06:21:53] 2025-11-25 11:21:23,870 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:23,871 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:23,908 | INFO     | [job] control thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:23,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:23,965 | INFO     | [job] validate thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,140 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,193 | INFO     | [data] control thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,342 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,437 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,868 | INFO     | [payload] control thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,870 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:24,911 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:25,053 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:25,195 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:25,394 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:27,283 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:21:53] 2025-11-25 11:21:46,728 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:21:53] 2025-11-25 11:21:47,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337255917376)>', '<ExcThread(monitor, started 140336814864128)>']
[2025-11-25 06:21:53] 2025-11-25 11:21:52,589 | INFO     | PID=15220 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 06:21:53] 2025-11-25 11:21:52,590 | INFO     | .. there are 3 such processes running
[2025-11-25 06:21:53] 2025-11-25 11:21:52,591 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:21:53] 2025-11-25 11:21:52,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:21:53] 2025-11-25 11:21:52,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:21:53] 2025-11-25 11:21:52,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:21:53] 2025-11-25 11:21:52,591 | INFO     | [monitor] control thread has ended
[2025-11-25 06:21:53] 2025-11-25 11:21:52,963 | INFO     | all workflow threads have been joined
[2025-11-25 06:21:53] 2025-11-25 11:21:52,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:21:53] 2025-11-25 11:21:52,963 | INFO     | traces error code: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:52,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:21:53] 2025-11-25 11:21:53,070 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:21:53] 2025-11-25 11:21:53,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:21:53] 2025-11-25 11:21:53,075 [wrapper] pilotpid: 15220
[2025-11-25 06:21:53] 2025-11-25 11:21:53,077 [wrapper] Pilot exit status: 0
[2025-11-25 06:21:53] 2025-11-25 11:21:53,090 [wrapper] pandaids: 6891569898
[2025-11-25 06:21:53] 2025-11-25 11:21:53,118 [wrapper] cleanup supervisor_pilot 26674 15221
[2025-11-25 06:21:53] 2025-11-25 11:21:53,121 [wrapper] Test setup, not cleaning
[2025-11-25 06:21:53] 2025-11-25 11:21:53,124 [wrapper] apfmon messages muted
[2025-11-25 06:21:53] 2025-11-25 11:21:53,126 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:21:53] 2025-11-25 11:21:53,128 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:21:53]  *** Error codes and diagnostics ***
[2025-11-25 06:21:53]     "exeErrorCode": 0,
[2025-11-25 06:21:53]     "exeErrorDiag": "",
[2025-11-25 06:21:53]     "pilotErrorCode": 0,
[2025-11-25 06:21:53]     "pilotErrorDiag": "",
[2025-11-25 06:21:53]  *** Listing of results directory ***
[2025-11-25 06:21:53] total 1317984
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:35 queuedata.json
[2025-11-25 06:21:53] -rwx------ 1 boincer umatlas     36292 Nov 18 10:37 runpilot2-wrapper.sh
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:21:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:58 run_atlas
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:58 job.xml
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas 409657031 Nov 24 10:58 EVNT.47493065._000220.pool.root.1
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 24 10:58 start_atlas.sh
[2025-11-25 06:21:53] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:58 shared
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 10:58 input.tar.gz
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:58 boinc_lockfile
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas      2773 Nov 24 10:58 pandaJob.out
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas    987541 Nov 24 10:58 agis_schedconf.cvmfs.json
[2025-11-25 06:21:53] drwx------ 5 boincer umatlas      4096 Nov 24 10:58 pilot3
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas       533 Nov 25 06:08 boinc_task_state.xml
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 06:18 init_data.xml
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas 912167200 Nov 25 06:20 HITS.47493068._002199.pool.root.1
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas      1068 Nov 25 06:21 memory_monitor_summary.json
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas   1516240 Nov 25 06:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas   2309799 Nov 25 06:21 log.47493068._002199.job.log.tgz.1
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas      8677 Nov 25 06:21 heartbeat.json
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas        29 Nov 25 06:21 wrapper_checkpoint.txt
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 06:21 boinc_mmap_file
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas        95 Nov 25 06:21 pilot_heartbeat.json
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas      5007 Nov 25 06:21 pilotlog.txt
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas   9629344 Nov 25 06:21 log.47493068._002199.job.log.1
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas       353 Nov 25 06:21 output.list
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas       620 Nov 25 06:21 runtime_log
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas  11960320 Nov 25 06:21 result.tar.gz
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas      8704 Nov 25 06:21 runtime_log.err
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas       668 Nov 25 06:21 a0iNDmnwcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkMFKDm5J2qkm.diag
[2025-11-25 06:21:53] -rw-r--r-- 1 boincer umatlas     21325 Nov 25 06:21 stderr.txt
[2025-11-25 06:21:53] HITS file was successfully produced:
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas 912167200 Nov 25 06:20 shared/HITS.pool.root.1
[2025-11-25 06:21:53]  *** Contents of shared directory: ***
[2025-11-25 06:21:53] total 1303132
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas 409657031 Nov 24 10:58 ATLAS.root_0
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 24 10:58 start_atlas.sh
[2025-11-25 06:21:53] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 10:58 input.tar.gz
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas 912167200 Nov 25 06:20 HITS.pool.root.1
[2025-11-25 06:21:53] -rw------- 1 boincer umatlas  11960320 Nov 25 06:21 result.tar.gz
06:21:55 (11530): run_atlas exited; CPU time 535227.548472
06:21:55 (11530): called boinc_finish(0)

</stderr_txt>
]]>

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