Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:21:20 (22300): wrapper (7.7.26015): starting
10:21:20 (22300): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 10:21:20] Arguments: --nthreads 12
[2025-11-24 10:21:20] Threads: 12
[2025-11-24 10:21:20] Checking for CVMFS
[2025-11-24 10:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:21:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:21:20] 2.11.2.0 723 114922 92784 153250 2 80 14527793 20275200 1 130560 0 49319852 99.913 6276579 33118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:21:20] CVMFS is ok
[2025-11-24 10:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:21:20] Further information can be found at the LHC@home message board.
[2025-11-24 10:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:21:20] Checking for apptainer binary...
[2025-11-24 10:21:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:21:20] Running /usr/bin/apptainer --version
[2025-11-24 10:21:20] apptainer version 1.3.2-1.el7
[2025-11-24 10:21:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:21:22] c-205-1.aglt2.org
[2025-11-24 10:21:22] apptainer works
[2025-11-24 10:21:22] Set ATHENA_PROC_NUMBER=12
[2025-11-24 10:21:22] Set ATHENA_CORE_NUMBER=12
[2025-11-24 10:21:22] Starting ATLAS job with PandaID=6895366345
[2025-11-24 10:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:38:25]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:38:25] 2025-11-24 22:37:37,966 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 17:38:25] 2025-11-24 22:37:37,969 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366345/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:38:25] 2025-11-24 22:37:37,969 | INFO     | extracted standard info from prmon json
[2025-11-24 17:38:25] 2025-11-24 22:37:37,969 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:38:25] 2025-11-24 22:37:37,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:38:25] 2025-11-24 22:37:37,978 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:38:25] 2025-11-24 22:37:37,979 | INFO     | sum of square deviations: 24481976499.81819
[2025-11-24 17:38:25] 2025-11-24 22:37:37,983 | INFO     | sum of deviations: 344224567535.27246
[2025-11-24 17:38:25] 2025-11-24 22:37:37,983 | INFO     | mean x: 1764010781.1818182
[2025-11-24 17:38:25] 2025-11-24 22:37:37,983 | INFO     | mean y: 3437635.24009324
[2025-11-24 17:38:25] 2025-11-24 22:37:37,983 | INFO     | intersect: -24799128786.812424
[2025-11-24 17:38:25] 2025-11-24 22:37:37,984 | INFO     | chi2: 6.188013041938339
[2025-11-24 17:38:25] 2025-11-24 22:37:37,984 | INFO     | sum of square deviations: 23635919309.65095
[2025-11-24 17:38:25] 2025-11-24 22:37:37,988 | INFO     | sum of deviations: 518646717302.2737
[2025-11-24 17:38:25] 2025-11-24 22:37:37,988 | INFO     | mean x: 1764010628.6839623
[2025-11-24 17:38:25] 2025-11-24 22:37:37,988 | INFO     | mean y: 3469047.599056604
[2025-11-24 17:38:25] 2025-11-24 22:37:37,988 | INFO     | intersect: -38704495295.45437
[2025-11-24 17:38:25] 2025-11-24 22:37:37,989 | INFO     | chi2: 2.8744936852505454
[2025-11-24 17:38:25] 2025-11-24 22:37:37,989 | INFO     | current chi2=2.8744936852505454 (change=53.54738805866938 %)
[2025-11-24 17:38:25] 2025-11-24 22:37:37,990 | INFO     | sum of square deviations: 22809583419.47963
[2025-11-24 17:38:25] 2025-11-24 22:37:37,993 | INFO     | sum of deviations: 556698273422.4915
[2025-11-24 17:38:25] 2025-11-24 22:37:37,993 | INFO     | mean x: 1764010476.1861575
[2025-11-24 17:38:25] 2025-11-24 22:37:37,993 | INFO     | mean y: 3476027.4295942723
[2025-11-24 17:38:25] 2025-11-24 22:37:37,994 | INFO     | intersect: -43049549901.72279
[2025-11-24 17:38:25] 2025-11-24 22:37:37,994 | INFO     | chi2: 2.5064554169902333
[2025-11-24 17:38:25] 2025-11-24 22:37:37,994 | INFO     | current chi2=2.5064554169902333 (change=12.803585902754671 %)
[2025-11-24 17:38:25] 2025-11-24 22:37:37,994 | INFO     | right removable region: 418
[2025-11-24 17:38:25] 2025-11-24 22:37:37,995 | INFO     | sum of square deviations: 23635871729.65093
[2025-11-24 17:38:25] 2025-11-24 22:37:37,999 | INFO     | sum of deviations: 199855264650.25452
[2025-11-24 17:38:25] 2025-11-24 22:37:37,999 | INFO     | mean x: 1764010933.6839623
[2025-11-24 17:38:25] 2025-11-24 22:37:37,999 | INFO     | mean y: 3463582.419811321
[2025-11-24 17:38:25] 2025-11-24 22:37:37,999 | INFO     | intersect: -14912291420.391651
[2025-11-24 17:38:25] 2025-11-24 22:37:37,999 | INFO     | chi2: 3.8334715451676176
[2025-11-24 17:38:25] 2025-11-24 22:37:38,000 | INFO     | current chi2=3.8334715451676176 (change=38.05004095520106 %)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,000 | INFO     | sum of square deviations: 22809514000.84964
[2025-11-24 17:38:25] 2025-11-24 22:37:38,004 | INFO     | sum of deviations: 166054986339.8187
[2025-11-24 17:38:25] 2025-11-24 22:37:38,004 | INFO     | mean x: 1764011086.183771
[2025-11-24 17:38:25] 2025-11-24 22:37:38,004 | INFO     | mean y: 3469813.443914081
[2025-11-24 17:38:25] 2025-11-24 22:37:38,004 | INFO     | intersect: -12838664254.323757
[2025-11-24 17:38:25] 2025-11-24 22:37:38,005 | INFO     | chi2: 3.7714143657479937
[2025-11-24 17:38:25] 2025-11-24 22:37:38,005 | INFO     | current chi2=3.7714143657479937 (change=1.6188245742387641 %)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,005 | INFO     | left removable region: 20
[2025-11-24 17:38:25] 2025-11-24 22:37:38,005 | INFO     | sum of square deviations: 19548941602.98743
[2025-11-24 17:38:25] 2025-11-24 22:37:38,006 | INFO     | monitor loop #1959: job 0:6895366345 is in state 'finished'
[2025-11-24 17:38:25] 2025-11-24 22:37:38,009 | INFO     | sum of deviations: 335208659643.25885
[2025-11-24 17:38:25] 2025-11-24 22:37:38,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,010 | INFO     | mean x: 1764011055.6909547
[2025-11-24 17:38:25] 2025-11-24 22:37:38,010 | INFO     | mean y: 3517647.7663316582
[2025-11-24 17:38:25] 2025-11-24 22:37:38,010 | INFO     | intersect: -30244246839.068695
[2025-11-24 17:38:25] 2025-11-24 22:37:38,011 | INFO     | chi2: 0.025686321523452973
[2025-11-24 17:38:25] 2025-11-24 22:37:38,011 | INFO     | current memory leak: 17.15 B/s (using 398 data points, chi2=0.03)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,011 | INFO     | could have reported an average CPU frequency of 2433 MHz (18 samples)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,011 | INFO     | ..............................
[2025-11-24 17:38:25] 2025-11-24 22:37:38,011 | INFO     | . Timing measurements:
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . get job = 0 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . initial setup = 2 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . payload setup = 7 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . stage-in = 0 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . payload execution = 26125 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . stage-out = 3 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | . log creation = 0 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,012 | INFO     | ..............................
[2025-11-24 17:38:25] 2025-11-24 22:37:38,407 | INFO     | time since job start (26161s) is within the limit (172800.0s)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,470 | INFO     | 
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | job summary report
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | --------------------------------------------------
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | PanDA job id: 6895366345
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | task id: 47556137
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | errors: (none)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,471 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | pilot state: finished 
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | transexitcode: 0
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | exeerrorcode: 0
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | exeerrordiag: 
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | exitcode: 0
[2025-11-24 17:38:25] 2025-11-24 22:37:38,472 | INFO     | exitmsg: OK
[2025-11-24 17:38:25] 2025-11-24 22:37:38,473 | INFO     | cpuconsumptiontime: 299771 s
[2025-11-24 17:38:25] 2025-11-24 22:37:38,473 | INFO     | nevents: 1000
[2025-11-24 17:38:25] 2025-11-24 22:37:38,473 | INFO     | neventsw: 0
[2025-11-24 17:38:25] 2025-11-24 22:37:38,473 | INFO     | pid: 989
[2025-11-24 17:38:25] 2025-11-24 22:37:38,473 | INFO     | pgrp: 989
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | corecount: 12
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | event service: False
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | sizes: {0: 2284259, 1: 2284259, 5: 2284549, 11: 2284605, 26133: 2321979, 26138: 2331157, 26144: 2331347}
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | --------------------------------------------------
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | 
[2025-11-24 17:38:25] 2025-11-24 22:37:38,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:38:25] 2025-11-24 22:37:38,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | job 6895366345 has completed (purged errors)
[2025-11-24 17:38:25] 2025-11-24 22:37:38,502 | INFO     | overall cleanup function is called
[2025-11-24 17:38:25] 2025-11-24 22:37:39,517 | INFO     | --- collectZombieJob: --- 10, [989]
[2025-11-24 17:38:25] 2025-11-24 22:37:39,517 | INFO     | zombie collector waiting for pid 989
[2025-11-24 17:38:25] 2025-11-24 22:37:39,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:38:25] 2025-11-24 22:37:39,518 | INFO     | collected zombie processes
[2025-11-24 17:38:25] 2025-11-24 22:37:39,518 | INFO     | will attempt to kill all subprocesses of pid=989
[2025-11-24 17:38:25] 2025-11-24 22:37:39,609 | INFO     | process IDs to be killed: [989] (in reverse order)
[2025-11-24 17:38:25] 2025-11-24 22:37:39,661 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:38:25] 2025-11-24 22:37:39,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:38:25] 2025-11-24 22:37:39,664 | INFO     | did not find any defunct processes belonging to 989
[2025-11-24 17:38:25] 2025-11-24 22:37:39,666 | INFO     | did not find any defunct processes belonging to 989
[2025-11-24 17:38:25] 2025-11-24 22:37:39,668 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:38:25] 2025-11-24 22:37:39,668 | INFO     | ready for new job
[2025-11-24 17:38:25] 2025-11-24 22:37:39,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:38:25] 2025-11-24 22:37:39,671 | INFO     | ***************************************
[2025-11-24 17:38:25] 2025-11-24 22:37:39,671 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:38:25] 2025-11-24 22:37:39,671 | INFO     | ***************************************
[2025-11-24 17:38:25] 2025-11-24 22:37:39,671 | INFO     | 
[2025-11-24 17:38:25] 2025-11-24 22:37:39,672 | INFO     | architecture information:
[2025-11-24 17:38:25] 2025-11-24 22:37:39,672 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:38:25] 2025-11-24 22:37:39,688 | INFO     | cat /etc/os-release:
[2025-11-24 17:38:25] NAME="CentOS Linux"
[2025-11-24 17:38:25] VERSION="7 (Core)"
[2025-11-24 17:38:25] ID="centos"
[2025-11-24 17:38:25] ID_LIKE="rhel fedora"
[2025-11-24 17:38:25] VERSION_ID="7"
[2025-11-24 17:38:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:38:25] ANSI_COLOR="0;31"
[2025-11-24 17:38:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:38:25] HOME_URL="https://www.centos.org/"
[2025-11-24 17:38:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:38:25] 
[2025-11-24 17:38:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:38:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:38:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:38:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:38:25] 
[2025-11-24 17:38:25] 2025-11-24 22:37:39,688 | INFO     | ***************************************
[2025-11-24 17:38:25] 2025-11-24 22:37:40,191 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:38:25] 2025-11-24 22:37:40,207 | INFO     | sufficient remaining disk space (28366077952 B)
[2025-11-24 17:38:25] 2025-11-24 22:37:40,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:38:25] 2025-11-24 22:37:40,208 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:38:25] 2025-11-24 22:37:40,208 | INFO     | update_server=False
[2025-11-24 17:38:25] 2025-11-24 22:37:40,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:38:25] 2025-11-24 22:37:40,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 17:38:25] 2025-11-24 22:37:40,209 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:38:25] 2025-11-24 22:37:40,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:38:25] 2025-11-24 22:37:40,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:38:25] 2025-11-24 22:37:40,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:38:25] 2025-11-24 22:37:40,513 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 17:38:25] 2025-11-24 22:37:40,513 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 17:38:25] 2025-11-24 22:37:40,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:38:25] 2025-11-24 22:37:40,514 | INFO     | will abort loop
[2025-11-24 17:38:25] 2025-11-24 22:37:41,063 | INFO     | all data control threads have been joined
[2025-11-24 17:38:25] 2025-11-24 22:37:41,081 | INFO     | all payload control threads have been joined
[2025-11-24 17:38:25] 2025-11-24 22:37:41,213 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:41,519 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:41,566 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:41,639 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:41,801 | INFO     | all job control threads have been joined
[2025-11-24 17:38:25] 2025-11-24 22:37:41,981 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:38:25] 2025-11-24 22:37:42,068 | INFO     | [data] control thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,086 | INFO     | [payload] control thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,212 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,213 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,511 | INFO     | [job] validate thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,635 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,803 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:42,806 | INFO     | [job] control thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:43,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:38:25] 2025-11-24 22:37:44,113 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:37:46,009 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:38:25] 2025-11-24 22:38:20,085 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:38:25] 2025-11-24 22:38:20,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199532787520)>', '<ExcThread(monitor, started 140198730000128)>']
[2025-11-24 17:38:25] 2025-11-24 22:38:21,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:38:25] 2025-11-24 22:38:21,377 | INFO     | [monitor] control thread has ended
[2025-11-24 17:38:25] 2025-11-24 22:38:25,476 | INFO     | all workflow threads have been joined
[2025-11-24 17:38:25] 2025-11-24 22:38:25,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:38:25] 2025-11-24 22:38:25,476 | INFO     | traces error code: 0
[2025-11-24 17:38:25] 2025-11-24 22:38:25,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:38:25] 2025-11-24 22:38:25,570 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:38:25] 2025-11-24 22:38:25,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:38:25] 2025-11-24 22:38:25,578 [wrapper] pilotpid: 26057
[2025-11-24 17:38:25] 2025-11-24 22:38:25,582 [wrapper] Pilot exit status: 0
[2025-11-24 17:38:25] 2025-11-24 22:38:25,597 [wrapper] pandaids: 6895366345
[2025-11-24 17:38:25] 2025-11-24 22:38:25,640 [wrapper] cleanup supervisor_pilot 19831 26058
[2025-11-24 17:38:25] 2025-11-24 22:38:25,644 [wrapper] Test setup, not cleaning
[2025-11-24 17:38:25] 2025-11-24 22:38:25,648 [wrapper] apfmon messages muted
[2025-11-24 17:38:25] 2025-11-24 22:38:25,652 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:38:25] 2025-11-24 22:38:25,656 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:38:25]  *** Error codes and diagnostics ***
[2025-11-24 17:38:25]     "exeErrorCode": 0,
[2025-11-24 17:38:25]     "exeErrorDiag": "",
[2025-11-24 17:38:25]     "pilotErrorCode": 0,
[2025-11-24 17:38:25]     "pilotErrorDiag": "",
[2025-11-24 17:38:25]  *** Listing of results directory ***
[2025-11-24 17:38:25] total 1318280
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:22 queuedata.json
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:24 pilot3.tar.gz
[2025-11-24 17:38:25] -rwx------ 1 boincer umatlas     36292 Nov 23 13:24 runpilot2-wrapper.sh
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:38:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:21 run_atlas
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:21 job.xml
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas 409720636 Nov 24 10:21 EVNT.47483658._000840.pool.root.1
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:21 start_atlas.sh
[2025-11-24 17:38:25] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:21 shared
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas    590104 Nov 24 10:21 input.tar.gz
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:21 boinc_lockfile
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:21 pandaJob.out
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas        57 Nov 24 10:21 setup.sh.local
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas    987541 Nov 24 10:21 agis_schedconf.cvmfs.json
[2025-11-24 17:38:25] drwx------ 5 boincer umatlas      4096 Nov 24 10:21 pilot3
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas       532 Nov 24 17:28 boinc_task_state.xml
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas        95 Nov 24 17:36 pilot_heartbeat.json
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas 924588689 Nov 24 17:36 HITS.47556137._008270.pool.root.1
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 17:37 init_data.xml
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas      1064 Nov 24 17:37 memory_monitor_summary.json
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas   1516227 Nov 24 17:37 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas   2185371 Nov 24 17:37 log.47556137._008270.job.log.tgz.1
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas      8665 Nov 24 17:37 heartbeat.json
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:38 wrapper_checkpoint.txt
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:38 boinc_mmap_file
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas      4738 Nov 24 17:38 pilotlog.txt
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas   3658618 Nov 24 17:38 log.47556137._008270.job.log.1
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas       353 Nov 24 17:38 output.list
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:38 runtime_log
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas   5867520 Nov 24 17:38 result.tar.gz
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas      9340 Nov 24 17:38 runtime_log.err
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas       669 Nov 24 17:38 65MNDmjwTh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4fIKDmKXmWKn.diag
[2025-11-24 17:38:25] -rw-r--r-- 1 boincer umatlas     21228 Nov 24 17:38 stderr.txt
[2025-11-24 17:38:25] HITS file was successfully produced:
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas 924588689 Nov 24 17:36 shared/HITS.pool.root.1
[2025-11-24 17:38:25]  *** Contents of shared directory: ***
[2025-11-24 17:38:25] total 1309372
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas 409720636 Nov 24 10:21 ATLAS.root_0
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:21 start_atlas.sh
[2025-11-24 17:38:25] -rw-r--r-- 2 boincer umatlas    590104 Nov 24 10:21 input.tar.gz
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas 924588689 Nov 24 17:36 HITS.pool.root.1
[2025-11-24 17:38:25] -rw------- 1 boincer umatlas   5867520 Nov 24 17:38 result.tar.gz
17:38:27 (22300): run_atlas exited; CPU time 292898.247827
17:38:27 (22300): called boinc_finish(0)

</stderr_txt>
]]>

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