Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:50 (32249): wrapper (7.7.26015): starting
10:11:50 (32249): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 10:11:50] Arguments: --nthreads 8
[2025-11-24 10:11:50] Threads: 8
[2025-11-24 10:11:50] Checking for CVMFS
[2025-11-24 10:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:11:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:11:51] 2.11.2.0 2913 70584 87300 153249 0 80 14434228 20275201 1 130560 0 21349010 99.904 3445334 30704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:11:51] CVMFS is ok
[2025-11-24 10:11:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:11:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:11:51] Further information can be found at the LHC@home message board.
[2025-11-24 10:11:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:11:51] Checking for apptainer binary...
[2025-11-24 10:11:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:11:51] Running /usr/bin/apptainer --version
[2025-11-24 10:11:51] apptainer version 1.3.2-1.el7
[2025-11-24 10:11:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:11:52] c-115-15.aglt2.org
[2025-11-24 10:11:52] apptainer works
[2025-11-24 10:11:53] Set ATHENA_PROC_NUMBER=8
[2025-11-24 10:11:53] Set ATHENA_CORE_NUMBER=8
[2025-11-24 10:11:53] Starting ATLAS job with PandaID=6895366604
[2025-11-24 10:11:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:39:34]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:39:34] 2025-11-25 02:38:58,969 | INFO     | time since job start (41208s) is within the limit (172800.0s)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,837 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 21:39:34] 2025-11-25 02:39:00,841 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-24 21:39:34] 2025-11-25 02:39:00,843 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366604/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,844 | INFO     | extracted standard info from prmon json
[2025-11-24 21:39:34] 2025-11-25 02:39:00,845 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:39:34] 2025-11-25 02:39:00,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:39:34] 2025-11-25 02:39:00,856 | INFO     | fitting pss+swap vs Time
[2025-11-24 21:39:34] 2025-11-25 02:39:00,857 | INFO     | sum of square deviations: 95365320296.87984
[2025-11-24 21:39:34] 2025-11-25 02:39:00,866 | INFO     | sum of deviations: 667209082829.8918
[2025-11-24 21:39:34] 2025-11-25 02:39:00,866 | INFO     | mean x: 1764017718.6533334
[2025-11-24 21:39:34] 2025-11-25 02:39:00,866 | INFO     | mean y: 3202520.3585185185
[2025-11-24 21:39:34] 2025-11-25 02:39:00,867 | INFO     | intersect: -12338481442.893234
[2025-11-24 21:39:34] 2025-11-25 02:39:00,867 | INFO     | chi2: 6.309784510369985
[2025-11-24 21:39:34] 2025-11-25 02:39:00,868 | INFO     | sum of square deviations: 93261889777.22975
[2025-11-24 21:39:34] 2025-11-25 02:39:00,877 | INFO     | sum of deviations: 914738063311.9211
[2025-11-24 21:39:34] 2025-11-25 02:39:00,877 | INFO     | mean x: 1764017566.1582088
[2025-11-24 21:39:34] 2025-11-25 02:39:00,878 | INFO     | mean y: 3220460.3686567163
[2025-11-24 21:39:34] 2025-11-25 02:39:00,878 | INFO     | intersect: -17298745176.078682
[2025-11-24 21:39:34] 2025-11-25 02:39:00,878 | INFO     | chi2: 3.1775854606473226
[2025-11-24 21:39:34] 2025-11-25 02:39:00,879 | INFO     | current chi2=3.1775854606473226 (change=49.64034896239271 %)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,879 | INFO     | sum of square deviations: 91189622632.54762
[2025-11-24 21:39:34] 2025-11-25 02:39:00,888 | INFO     | sum of deviations: 1012510440430.9685
[2025-11-24 21:39:34] 2025-11-25 02:39:00,888 | INFO     | mean x: 1764017413.663158
[2025-11-24 21:39:34] 2025-11-25 02:39:00,888 | INFO     | mean y: 3227644.272180451
[2025-11-24 21:39:34] 2025-11-25 02:39:00,889 | INFO     | intersect: -19583277890.826813
[2025-11-24 21:39:34] 2025-11-25 02:39:00,889 | INFO     | chi2: 2.542499113330805
[2025-11-24 21:39:34] 2025-11-25 02:39:00,889 | INFO     | current chi2=2.542499113330805 (change=19.98644427291472 %)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,890 | INFO     | right removable region: 664
[2025-11-24 21:39:34] 2025-11-25 02:39:00,890 | INFO     | sum of square deviations: 93261661698.54477
[2025-11-24 21:39:34] 2025-11-25 02:39:00,900 | INFO     | sum of deviations: 464281908158.7468
[2025-11-24 21:39:34] 2025-11-25 02:39:00,900 | INFO     | mean x: 1764017871.1567163
[2025-11-24 21:39:34] 2025-11-25 02:39:00,900 | INFO     | mean y: 3217201.2119402983
[2025-11-24 21:39:34] 2025-11-25 02:39:00,900 | INFO     | intersect: -8778543367.177654
[2025-11-24 21:39:34] 2025-11-25 02:39:00,901 | INFO     | chi2: 4.031437897702428
[2025-11-24 21:39:34] 2025-11-25 02:39:00,901 | INFO     | current chi2=4.031437897702428 (change=36.10815248798349 %)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,902 | INFO     | sum of square deviations: 91189248215.82863
[2025-11-24 21:39:34] 2025-11-25 02:39:00,910 | INFO     | sum of deviations: 412622361254.6859
[2025-11-24 21:39:34] 2025-11-25 02:39:00,910 | INFO     | mean x: 1764018023.6571429
[2025-11-24 21:39:34] 2025-11-25 02:39:00,910 | INFO     | mean y: 3221000.739849624
[2025-11-24 21:39:34] 2025-11-25 02:39:00,911 | INFO     | intersect: -7978786708.047143
[2025-11-24 21:39:34] 2025-11-25 02:39:00,911 | INFO     | chi2: 3.9571634502063335
[2025-11-24 21:39:34] 2025-11-25 02:39:00,911 | INFO     | current chi2=3.9571634502063335 (change=1.842381040730525 %)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,911 | INFO     | left removable region: 20
[2025-11-24 21:39:34] 2025-11-25 02:39:00,912 | INFO     | sum of square deviations: 82820522605.88828
[2025-11-24 21:39:34] 2025-11-25 02:39:00,920 | INFO     | sum of deviations: 696264638155.1688
[2025-11-24 21:39:34] 2025-11-25 02:39:00,920 | INFO     | mean x: 1764017993.167702
[2025-11-24 21:39:34] 2025-11-25 02:39:00,920 | INFO     | mean y: 3253150.998447205
[2025-11-24 21:39:34] 2025-11-25 02:39:00,920 | INFO     | intersect: -14826686471.053566
[2025-11-24 21:39:34] 2025-11-25 02:39:00,921 | INFO     | chi2: 0.080184652932526
[2025-11-24 21:39:34] 2025-11-25 02:39:00,921 | INFO     | current memory leak: 8.41 B/s (using 644 data points, chi2=0.08)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,922 | INFO     | could have reported an average CPU frequency of 2392 MHz (26 samples)
[2025-11-24 21:39:34] 2025-11-25 02:39:00,922 | INFO     | ..............................
[2025-11-24 21:39:34] 2025-11-25 02:39:00,922 | INFO     | . Timing measurements:
[2025-11-24 21:39:34] 2025-11-25 02:39:00,922 | INFO     | . get job = 0 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,922 | INFO     | . initial setup = 2 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | . payload setup = 8 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | . stage-in = 0 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | . payload execution = 41170 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | . stage-out = 3 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | . log creation = 0 s
[2025-11-24 21:39:34] 2025-11-25 02:39:00,923 | INFO     | ..............................
[2025-11-24 21:39:34] 2025-11-25 02:39:00,979 | INFO     | time since job start (41210s) is within the limit (172800.0s)
[2025-11-24 21:39:34] 2025-11-25 02:39:01,392 | INFO     | 
[2025-11-24 21:39:34] 2025-11-25 02:39:01,393 | INFO     | job summary report
[2025-11-24 21:39:34] 2025-11-25 02:39:01,393 | INFO     | --------------------------------------------------
[2025-11-24 21:39:34] 2025-11-25 02:39:01,393 | INFO     | PanDA job id: 6895366604
[2025-11-24 21:39:34] 2025-11-25 02:39:01,393 | INFO     | task id: 47556137
[2025-11-24 21:39:34] 2025-11-25 02:39:01,393 | INFO     | errors: (none)
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | pilot state: finished 
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | transexitcode: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | exeerrorcode: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | exeerrordiag: 
[2025-11-24 21:39:34] 2025-11-25 02:39:01,394 | INFO     | exitcode: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:01,395 | INFO     | exitmsg: OK
[2025-11-24 21:39:34] 2025-11-25 02:39:01,395 | INFO     | cpuconsumptiontime: 319613 s
[2025-11-24 21:39:34] 2025-11-25 02:39:01,395 | INFO     | nevents: 1000
[2025-11-24 21:39:34] 2025-11-25 02:39:01,395 | INFO     | neventsw: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:01,395 | INFO     | pid: 10059
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | pgrp: 10059
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | corecount: 8
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | event service: False
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | sizes: {0: 2283481, 1: 2284337, 7: 2284599, 12: 2284627, 41182: 2328669, 41186: 2337663, 41187: 2337847, 41194: 2338093}
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | --------------------------------------------------
[2025-11-24 21:39:34] 2025-11-25 02:39:01,396 | INFO     | 
[2025-11-24 21:39:34] 2025-11-25 02:39:01,397 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 21:39:34] 2025-11-25 02:39:01,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:39:34] 2025-11-25 02:39:01,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:39:34] 2025-11-25 02:39:01,430 | INFO     | job 6895366604 has completed (purged errors)
[2025-11-24 21:39:34] 2025-11-25 02:39:01,430 | INFO     | overall cleanup function is called
[2025-11-24 21:39:34] 2025-11-25 02:39:02,446 | INFO     | --- collectZombieJob: --- 10, [10059]
[2025-11-24 21:39:34] 2025-11-25 02:39:02,446 | INFO     | zombie collector waiting for pid 10059
[2025-11-24 21:39:34] 2025-11-25 02:39:02,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:39:34] 2025-11-25 02:39:02,446 | INFO     | collected zombie processes
[2025-11-24 21:39:34] 2025-11-25 02:39:02,446 | INFO     | will attempt to kill all subprocesses of pid=10059
[2025-11-24 21:39:34] 2025-11-25 02:39:02,531 | INFO     | process IDs to be killed: [10059] (in reverse order)
[2025-11-24 21:39:34] 2025-11-25 02:39:02,580 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:39:34] 2025-11-25 02:39:02,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:39:34] 2025-11-25 02:39:02,585 | INFO     | did not find any defunct processes belonging to 10059
[2025-11-24 21:39:34] 2025-11-25 02:39:02,588 | INFO     | did not find any defunct processes belonging to 10059
[2025-11-24 21:39:34] 2025-11-25 02:39:02,590 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:39:34] 2025-11-25 02:39:02,591 | INFO     | ready for new job
[2025-11-24 21:39:34] 2025-11-25 02:39:02,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:39:34] 2025-11-25 02:39:02,593 | INFO     | ***************************************
[2025-11-24 21:39:34] 2025-11-25 02:39:02,594 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:39:34] 2025-11-25 02:39:02,594 | INFO     | ***************************************
[2025-11-24 21:39:34] 2025-11-25 02:39:02,594 | INFO     | 
[2025-11-24 21:39:34] 2025-11-25 02:39:02,594 | INFO     | architecture information:
[2025-11-24 21:39:34] 2025-11-25 02:39:02,595 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:39:34] 2025-11-25 02:39:02,613 | INFO     | cat /etc/os-release:
[2025-11-24 21:39:34] NAME="CentOS Linux"
[2025-11-24 21:39:34] VERSION="7 (Core)"
[2025-11-24 21:39:34] ID="centos"
[2025-11-24 21:39:34] ID_LIKE="rhel fedora"
[2025-11-24 21:39:34] VERSION_ID="7"
[2025-11-24 21:39:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:39:34] ANSI_COLOR="0;31"
[2025-11-24 21:39:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:39:34] HOME_URL="https://www.centos.org/"
[2025-11-24 21:39:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:39:34] 
[2025-11-24 21:39:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:39:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:39:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:39:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:39:34] 
[2025-11-24 21:39:34] 2025-11-25 02:39:02,614 | INFO     | ***************************************
[2025-11-24 21:39:34] 2025-11-25 02:39:03,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 21:39:34] 2025-11-25 02:39:03,139 | INFO     | sufficient remaining disk space (17444110336 B)
[2025-11-24 21:39:34] 2025-11-25 02:39:03,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:39:34] 2025-11-25 02:39:03,140 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:39:34] 2025-11-25 02:39:03,140 | INFO     | update_server=False
[2025-11-24 21:39:34] 2025-11-25 02:39:03,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:39:34] 2025-11-25 02:39:03,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:39:34] 2025-11-25 02:39:03,553 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 21:39:34] 2025-11-25 02:39:03,553 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 21:39:34] 2025-11-25 02:39:03,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:39:34] 2025-11-25 02:39:03,554 | INFO     | will abort loop
[2025-11-24 21:39:34] 2025-11-25 02:39:04,145 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:04,153 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:04,188 | INFO     | all data control threads have been joined
[2025-11-24 21:39:34] 2025-11-25 02:39:04,262 | INFO     | all job control threads have been joined
[2025-11-24 21:39:34] 2025-11-25 02:39:04,456 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:04,479 | INFO     | all payload control threads have been joined
[2025-11-24 21:39:34] 2025-11-25 02:39:04,559 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:04,741 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:04,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:39:34] 2025-11-25 02:39:04,909 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,193 | INFO     | [data] control thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,267 | INFO     | [job] control thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,268 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,344 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,456 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,485 | INFO     | [payload] control thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:05,558 | INFO     | [job] validate thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:06,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:39:34] 2025-11-25 02:39:07,027 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:08,765 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:39:34] 2025-11-25 02:39:17,913 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:39:34] 2025-11-25 02:39:19,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662091335488)>', '<ExcThread(monitor, started 139660995065600)>']
[2025-11-24 21:39:34] 2025-11-25 02:39:24,243 | INFO     | all workflow threads have been joined
[2025-11-24 21:39:34] 2025-11-25 02:39:24,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:39:34] 2025-11-25 02:39:24,244 | INFO     | traces error code: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:24,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:39:34] 2025-11-25 02:39:34,111 | INFO     | PID=3625 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 21:39:34] 2025-11-25 02:39:34,112 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:39:34] 2025-11-25 02:39:34,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:39:34] 2025-11-25 02:39:34,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:39:34] 2025-11-25 02:39:34,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:39:34] 2025-11-25 02:39:34,112 | INFO     | [monitor] control thread has ended
[2025-11-24 21:39:34] 2025-11-25 02:39:34,217 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:39:34] 2025-11-25 02:39:34,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:39:34] 2025-11-25 02:39:34,227 [wrapper] pilotpid: 3625
[2025-11-24 21:39:34] 2025-11-25 02:39:34,231 [wrapper] Pilot exit status: 0
[2025-11-24 21:39:34] 2025-11-25 02:39:34,247 [wrapper] pandaids: 6895366604
[2025-11-24 21:39:34] 2025-11-25 02:39:34,287 [wrapper] cleanup supervisor_pilot 15648 3626
[2025-11-24 21:39:34] 2025-11-25 02:39:34,292 [wrapper] Test setup, not cleaning
[2025-11-24 21:39:34] 2025-11-25 02:39:34,296 [wrapper] apfmon messages muted
[2025-11-24 21:39:34] 2025-11-25 02:39:34,301 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:39:34] 2025-11-25 02:39:34,305 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:39:34]  *** Error codes and diagnostics ***
[2025-11-24 21:39:34]     "exeErrorCode": 0,
[2025-11-24 21:39:34]     "exeErrorDiag": "",
[2025-11-24 21:39:34]     "pilotErrorCode": 0,
[2025-11-24 21:39:34]     "pilotErrorDiag": "",
[2025-11-24 21:39:34]  *** Listing of results directory ***
[2025-11-24 21:39:34] total 1337044
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-24 21:39:34] -rwx------ 1 boincer umatlas     36292 Nov 23 13:37 runpilot2-wrapper.sh
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:37 queuedata.json
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:39:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:11 run_atlas
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:11 job.xml
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas 409405432 Nov 24 10:11 EVNT.47483658._000845.pool.root.1
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:11 start_atlas.sh
[2025-11-24 21:39:34] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:11 shared
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 10:11 input.tar.gz
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:11 boinc_lockfile
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:11 pandaJob.out
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas        57 Nov 24 10:11 setup.sh.local
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas    988283 Nov 24 10:12 agis_schedconf.cvmfs.json
[2025-11-24 21:39:34] drwx------ 5 boincer umatlas      4096 Nov 24 10:12 pilot3
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas       532 Nov 24 21:27 boinc_task_state.xml
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas      5913 Nov 24 21:37 init_data.xml
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas 940550846 Nov 24 21:38 HITS.47556137._008320.pool.root.1
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas      1061 Nov 24 21:38 memory_monitor_summary.json
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas   1516227 Nov 24 21:38 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas   1936990 Nov 24 21:38 log.47556137._008320.job.log.tgz.1
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas        95 Nov 24 21:38 pilot_heartbeat.json
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas      8660 Nov 24 21:39 heartbeat.json
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 21:39 boinc_mmap_file
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas        29 Nov 24 21:39 wrapper_checkpoint.txt
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas       744 Nov 24 21:39 pilotlog.txt
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas   5694554 Nov 24 21:39 log.47556137._008320.job.log.1
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas       353 Nov 24 21:39 output.list
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas       620 Nov 24 21:39 runtime_log
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas   7649280 Nov 24 21:39 result.tar.gz
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 21:39 runtime_log.err
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas       668 Nov 24 21:39 JhOODmk8Th8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbgIKDmquEOjm.diag
[2025-11-24 21:39:34] -rw-r--r-- 1 boincer umatlas     21277 Nov 24 21:39 stderr.txt
[2025-11-24 21:39:34] HITS file was successfully produced:
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas 940550846 Nov 24 21:38 shared/HITS.pool.root.1
[2025-11-24 21:39:34]  *** Contents of shared directory: ***
[2025-11-24 21:39:34] total 1326396
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas 409405432 Nov 24 10:11 ATLAS.root_0
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:11 start_atlas.sh
[2025-11-24 21:39:34] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 10:11 input.tar.gz
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas 940550846 Nov 24 21:38 HITS.pool.root.1
[2025-11-24 21:39:34] -rw------- 1 boincer umatlas   7649280 Nov 24 21:39 result.tar.gz
21:39:35 (32249): run_atlas exited; CPU time 317738.124498
21:39:35 (32249): called boinc_finish(0)

</stderr_txt>
]]>

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