Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:49:54 (1188): wrapper (7.7.26015): starting
10:49:54 (1188): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 10:49:54] Arguments: --nthreads 12
[2025-11-24 10:49:54] Threads: 12
[2025-11-24 10:49:54] Checking for CVMFS
[2025-11-24 10:49:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:49:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:49:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:49:54] 2.11.2.0 3165 70624 94780 153250 0 82 14262903 20275200 1 130560 0 29503280 99.930 3422886 35806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:49:54] CVMFS is ok
[2025-11-24 10:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:49:54] Further information can be found at the LHC@home message board.
[2025-11-24 10:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:49:54] Checking for apptainer binary...
[2025-11-24 10:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:49:54] Running /usr/bin/apptainer --version
[2025-11-24 10:49:54] apptainer version 1.3.2-1.el7
[2025-11-24 10:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:49:56] c-115-40.aglt2.org
[2025-11-24 10:49:56] apptainer works
[2025-11-24 10:49:56] Set ATHENA_PROC_NUMBER=12
[2025-11-24 10:49:56] Set ATHENA_CORE_NUMBER=12
[2025-11-24 10:49:56] Starting ATLAS job with PandaID=6895366379
[2025-11-24 10:49:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:24:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:24:55] 2025-11-24 22:24:03,703 | INFO     | time since job start (23633s) is within the limit (172800.0s)
[2025-11-24 17:24:55] 2025-11-24 22:24:03,901 | INFO     | monitor loop #1776: job 0:6895366379 is in state 'finished'
[2025-11-24 17:24:55] 2025-11-24 22:24:03,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:24:55] 2025-11-24 22:24:03,979 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:24:55] 2025-11-24 22:24:03,983 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-11-24 17:24:55] 2025-11-24 22:24:03,985 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366379/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:24:55] 2025-11-24 22:24:03,986 | INFO     | extracted standard info from prmon json
[2025-11-24 17:24:55] 2025-11-24 22:24:03,986 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:24:55] 2025-11-24 22:24:03,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:24:55] 2025-11-24 22:24:03,992 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:24:55] 2025-11-24 22:24:03,992 | INFO     | sum of square deviations: 17972560829.741596
[2025-11-24 17:24:55] 2025-11-24 22:24:03,995 | INFO     | sum of deviations: 351260456410.7363
[2025-11-24 17:24:55] 2025-11-24 22:24:03,995 | INFO     | mean x: 1764011212.136951
[2025-11-24 17:24:55] 2025-11-24 22:24:03,996 | INFO     | mean y: 3762104.7596899224
[2025-11-24 17:24:55] 2025-11-24 22:24:03,996 | INFO     | intersect: -34472537035.84477
[2025-11-24 17:24:55] 2025-11-24 22:24:03,996 | INFO     | chi2: 5.008633471457004
[2025-11-24 17:24:55] 2025-11-24 22:24:03,997 | INFO     | sum of square deviations: 17284926892.146664
[2025-11-24 17:24:55] 2025-11-24 22:24:03,999 | INFO     | sum of deviations: 496597326870.4557
[2025-11-24 17:24:55] 2025-11-24 22:24:04,000 | INFO     | mean x: 1764011059.6387434
[2025-11-24 17:24:55] 2025-11-24 22:24:04,000 | INFO     | mean y: 3794284.6989528798
[2025-11-24 17:24:55] 2025-11-24 22:24:04,000 | INFO     | intersect: -50676384014.726105
[2025-11-24 17:24:55] 2025-11-24 22:24:04,000 | INFO     | chi2: 2.5290868066248695
[2025-11-24 17:24:55] 2025-11-24 22:24:04,000 | INFO     | current chi2=2.5290868066248695 (change=49.50545251439287 %)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,001 | INFO     | sum of square deviations: 16615014368.100807
[2025-11-24 17:24:55] 2025-11-24 22:24:04,003 | INFO     | sum of deviations: 504366982131.655
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | mean x: 1764010907.1352785
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | mean y: 3796011.379310345
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | intersect: -53544689591.33537
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | chi2: 2.4035638587396404
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | current chi2=2.4035638587396404 (change=4.963172776688621 %)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,004 | INFO     | right removable region: 376
[2025-11-24 17:24:55] 2025-11-24 22:24:04,005 | INFO     | sum of square deviations: 17284894562.146664
[2025-11-24 17:24:55] 2025-11-24 22:24:04,008 | INFO     | sum of deviations: 218011480368.4082
[2025-11-24 17:24:55] 2025-11-24 22:24:04,008 | INFO     | mean x: 1764011364.6387434
[2025-11-24 17:24:55] 2025-11-24 22:24:04,008 | INFO     | mean y: 3791539.35078534
[2025-11-24 17:24:55] 2025-11-24 22:24:04,008 | INFO     | intersect: -22245388379.501255
[2025-11-24 17:24:55] 2025-11-24 22:24:04,008 | INFO     | chi2: 2.727518907069271
[2025-11-24 17:24:55] 2025-11-24 22:24:04,009 | INFO     | current chi2=2.727518907069271 (change=45.54365132500223 %)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,009 | INFO     | sum of square deviations: 16614996069.549099
[2025-11-24 17:24:55] 2025-11-24 22:24:04,012 | INFO     | sum of deviations: 186465324693.90695
[2025-11-24 17:24:55] 2025-11-24 22:24:04,012 | INFO     | mean x: 1764011517.1405835
[2025-11-24 17:24:55] 2025-11-24 22:24:04,012 | INFO     | mean y: 3798712.0583554376
[2025-11-24 17:24:55] 2025-11-24 22:24:04,012 | INFO     | intersect: -19793195456.977085
[2025-11-24 17:24:55] 2025-11-24 22:24:04,013 | INFO     | chi2: 2.6772601121969095
[2025-11-24 17:24:55] 2025-11-24 22:24:04,013 | INFO     | current chi2=2.6772601121969095 (change=1.8426561495907237 %)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,013 | INFO     | left removable region: 20
[2025-11-24 17:24:55] 2025-11-24 22:24:04,013 | INFO     | sum of square deviations: 13990292396.528202
[2025-11-24 17:24:55] 2025-11-24 22:24:04,016 | INFO     | sum of deviations: 305203874517.35425
[2025-11-24 17:24:55] 2025-11-24 22:24:04,016 | INFO     | mean x: 1764011486.6348314
[2025-11-24 17:24:55] 2025-11-24 22:24:04,016 | INFO     | mean y: 3842146.6488764044
[2025-11-24 17:24:55] 2025-11-24 22:24:04,016 | INFO     | intersect: -38478780314.31358
[2025-11-24 17:24:55] 2025-11-24 22:24:04,016 | INFO     | chi2: 0.031731401637458564
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | current memory leak: 21.82 B/s (using 356 data points, chi2=0.03)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | could have reported an average CPU frequency of 2510 MHz (17 samples)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | ..............................
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | . Timing measurements:
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | . get job = 0 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,017 | INFO     | . initial setup = 2 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | . payload setup = 7 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | . stage-in = 0 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | . payload execution = 23597 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | . stage-out = 3 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | . log creation = 0 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,018 | INFO     | ..............................
[2025-11-24 17:24:55] 2025-11-24 22:24:04,095 | INFO     | 
[2025-11-24 17:24:55] 2025-11-24 22:24:04,095 | INFO     | job summary report
[2025-11-24 17:24:55] 2025-11-24 22:24:04,095 | INFO     | --------------------------------------------------
[2025-11-24 17:24:55] 2025-11-24 22:24:04,095 | INFO     | PanDA job id: 6895366379
[2025-11-24 17:24:55] 2025-11-24 22:24:04,095 | INFO     | task id: 47556137
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | errors: (none)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | pilot state: finished 
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | transexitcode: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | exeerrorcode: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:04,096 | INFO     | exeerrordiag: 
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | exitcode: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | exitmsg: OK
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | cpuconsumptiontime: 271442 s
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | nevents: 1000
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | neventsw: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:04,097 | INFO     | pid: 13471
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | pgrp: 13471
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | corecount: 12
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | event service: False
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | sizes: {0: 2284259, 1: 2284287, 5: 2284549, 11: 2284605, 23608: 2320646, 23611: 2329640, 23612: 2329824, 23617: 2330134}
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | --------------------------------------------------
[2025-11-24 17:24:55] 2025-11-24 22:24:04,098 | INFO     | 
[2025-11-24 17:24:55] 2025-11-24 22:24:04,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:24:55] 2025-11-24 22:24:04,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:24:55] 2025-11-24 22:24:04,127 | INFO     | job 6895366379 has completed (purged errors)
[2025-11-24 17:24:55] 2025-11-24 22:24:04,127 | INFO     | overall cleanup function is called
[2025-11-24 17:24:55] 2025-11-24 22:24:05,143 | INFO     | --- collectZombieJob: --- 10, [13471]
[2025-11-24 17:24:55] 2025-11-24 22:24:05,143 | INFO     | zombie collector waiting for pid 13471
[2025-11-24 17:24:55] 2025-11-24 22:24:05,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:24:55] 2025-11-24 22:24:05,144 | INFO     | collected zombie processes
[2025-11-24 17:24:55] 2025-11-24 22:24:05,144 | INFO     | will attempt to kill all subprocesses of pid=13471
[2025-11-24 17:24:55] 2025-11-24 22:24:05,234 | INFO     | process IDs to be killed: [13471] (in reverse order)
[2025-11-24 17:24:55] 2025-11-24 22:24:05,284 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:24:55] 2025-11-24 22:24:05,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:24:55] 2025-11-24 22:24:05,288 | INFO     | did not find any defunct processes belonging to 13471
[2025-11-24 17:24:55] 2025-11-24 22:24:05,292 | INFO     | did not find any defunct processes belonging to 13471
[2025-11-24 17:24:55] 2025-11-24 22:24:05,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:24:55] 2025-11-24 22:24:05,294 | INFO     | ready for new job
[2025-11-24 17:24:55] 2025-11-24 22:24:05,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:24:55] 2025-11-24 22:24:05,297 | INFO     | ***************************************
[2025-11-24 17:24:55] 2025-11-24 22:24:05,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:24:55] 2025-11-24 22:24:05,297 | INFO     | ***************************************
[2025-11-24 17:24:55] 2025-11-24 22:24:05,297 | INFO     | 
[2025-11-24 17:24:55] 2025-11-24 22:24:05,298 | INFO     | architecture information:
[2025-11-24 17:24:55] 2025-11-24 22:24:05,299 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:24:55] 2025-11-24 22:24:05,314 | INFO     | cat /etc/os-release:
[2025-11-24 17:24:55] NAME="CentOS Linux"
[2025-11-24 17:24:55] VERSION="7 (Core)"
[2025-11-24 17:24:55] ID="centos"
[2025-11-24 17:24:55] ID_LIKE="rhel fedora"
[2025-11-24 17:24:55] VERSION_ID="7"
[2025-11-24 17:24:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:24:55] ANSI_COLOR="0;31"
[2025-11-24 17:24:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:24:55] HOME_URL="https://www.centos.org/"
[2025-11-24 17:24:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:24:55] 
[2025-11-24 17:24:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:24:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:24:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:24:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:24:55] 
[2025-11-24 17:24:55] 2025-11-24 22:24:05,314 | INFO     | ***************************************
[2025-11-24 17:24:55] 2025-11-24 22:24:05,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:24:55] 2025-11-24 22:24:05,833 | INFO     | sufficient remaining disk space (17593008128 B)
[2025-11-24 17:24:55] 2025-11-24 22:24:05,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:24:55] 2025-11-24 22:24:05,834 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:24:55] 2025-11-24 22:24:05,834 | INFO     | update_server=False
[2025-11-24 17:24:55] 2025-11-24 22:24:05,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:24:55] 2025-11-24 22:24:05,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:24:55] 2025-11-24 22:24:05,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:24:55] 2025-11-24 22:24:05,835 | INFO     | aborting loop
[2025-11-24 17:24:55] 2025-11-24 22:24:05,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:24:55] 2025-11-24 22:24:05,981 | INFO     | all data control threads have been joined
[2025-11-24 17:24:55] 2025-11-24 22:24:06,403 | INFO     | all payload control threads have been joined
[2025-11-24 17:24:55] 2025-11-24 22:24:06,651 | INFO     | all job control threads have been joined
[2025-11-24 17:24:55] 2025-11-24 22:24:06,835 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:06,841 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:06,841 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:06,901 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:06,986 | INFO     | [data] control thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,028 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,408 | INFO     | [payload] control thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,442 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,520 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,657 | INFO     | [job] control thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:07,841 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:08,124 | INFO     | [job] validate thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:08,267 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:08,396 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:09,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:24:55] 2025-11-24 22:24:13,058 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:16,605 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:24:55] 2025-11-24 22:24:17,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:24:55] 2025-11-24 22:24:36,900 | INFO     | PID=6577 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 17:24:55] 2025-11-24 22:24:36,900 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:24:55] 2025-11-24 22:24:36,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:24:55] 2025-11-24 22:24:36,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:24:55] 2025-11-24 22:24:49,153 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:24:55] 2025-11-24 22:24:50,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113502193472)>', '<ExcThread(monitor, started 140112721581824)>']
[2025-11-24 17:24:55] 2025-11-24 22:24:50,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:24:55] 2025-11-24 22:24:50,966 | INFO     | [monitor] control thread has ended
[2025-11-24 17:24:55] 2025-11-24 22:24:55,515 | INFO     | all workflow threads have been joined
[2025-11-24 17:24:55] 2025-11-24 22:24:55,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:24:55] 2025-11-24 22:24:55,516 | INFO     | traces error code: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:55,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:24:55] 2025-11-24 22:24:55,610 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:24:55] 2025-11-24 22:24:55,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:24:55] 2025-11-24 22:24:55,617 [wrapper] pilotpid: 6577
[2025-11-24 17:24:55] 2025-11-24 22:24:55,621 [wrapper] Pilot exit status: 0
[2025-11-24 17:24:55] 2025-11-24 22:24:55,633 [wrapper] pandaids: 6895366379
[2025-11-24 17:24:55] 2025-11-24 22:24:55,676 [wrapper] cleanup supervisor_pilot 16896 6578
[2025-11-24 17:24:55] 2025-11-24 22:24:55,680 [wrapper] Test setup, not cleaning
[2025-11-24 17:24:55] 2025-11-24 22:24:55,684 [wrapper] apfmon messages muted
[2025-11-24 17:24:55] 2025-11-24 22:24:55,688 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:24:55] 2025-11-24 22:24:55,692 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:24:55]  *** Error codes and diagnostics ***
[2025-11-24 17:24:55]     "exeErrorCode": 0,
[2025-11-24 17:24:55]     "exeErrorDiag": "",
[2025-11-24 17:24:55]     "pilotErrorCode": 0,
[2025-11-24 17:24:55]     "pilotErrorDiag": "",
[2025-11-24 17:24:55]  *** Listing of results directory ***
[2025-11-24 17:24:55] total 1309380
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:24 pilot3.tar.gz
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:29 queuedata.json
[2025-11-24 17:24:55] -rwx------ 1 boincer umatlas     36292 Nov 23 13:31 runpilot2-wrapper.sh
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:24:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:49 run_atlas
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:49 job.xml
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas 410162112 Nov 24 10:49 EVNT.47483658._000844.pool.root.1
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:49 start_atlas.sh
[2025-11-24 17:24:55] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:49 shared
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 10:49 input.tar.gz
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:49 boinc_lockfile
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:49 pandaJob.out
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas        57 Nov 24 10:49 setup.sh.local
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas    987541 Nov 24 10:50 agis_schedconf.cvmfs.json
[2025-11-24 17:24:55] drwx------ 5 boincer umatlas      4096 Nov 24 10:50 pilot3
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas       532 Nov 24 17:16 boinc_task_state.xml
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas      5957 Nov 24 17:21 init_data.xml
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas 915790019 Nov 24 17:23 HITS.47556137._008304.pool.root.1
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas        95 Nov 24 17:23 pilot_heartbeat.json
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas      1064 Nov 24 17:23 memory_monitor_summary.json
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas   1516227 Nov 24 17:23 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas   2157976 Nov 24 17:23 log.47556137._008304.job.log.tgz.1
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas      8668 Nov 24 17:24 heartbeat.json
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:24 wrapper_checkpoint.txt
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:24 boinc_mmap_file
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas      4817 Nov 24 17:24 pilotlog.txt
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas   3312805 Nov 24 17:24 log.47556137._008304.job.log.1
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas       353 Nov 24 17:24 output.list
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:24 runtime_log
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas   5488640 Nov 24 17:24 result.tar.gz
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 17:24 runtime_log.err
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas       670 Nov 24 17:24 bxIMDmr2Th8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI6KKDmF0tHOm.diag
[2025-11-24 17:24:55] -rw-r--r-- 1 boincer umatlas     21307 Nov 24 17:24 stderr.txt
[2025-11-24 17:24:55] HITS file was successfully produced:
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas 915790019 Nov 24 17:23 shared/HITS.pool.root.1
[2025-11-24 17:24:55]  *** Contents of shared directory: ***
[2025-11-24 17:24:55] total 1300840
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas 410162112 Nov 24 10:49 ATLAS.root_0
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:49 start_atlas.sh
[2025-11-24 17:24:55] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 10:49 input.tar.gz
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas 915790019 Nov 24 17:23 HITS.pool.root.1
[2025-11-24 17:24:55] -rw------- 1 boincer umatlas   5488640 Nov 24 17:24 result.tar.gz
17:24:56 (1188): run_atlas exited; CPU time 265623.403715
17:24:56 (1188): called boinc_finish(0)

</stderr_txt>
]]>

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