Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:16 (348157): wrapper (7.7.26015): starting
21:46:16 (348157): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 21:46:16] Arguments: --nthreads 8
[2025-11-24 21:46:16] Threads: 8
[2025-11-24 21:46:16] Checking for CVMFS
[2025-11-24 21:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 21:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 21:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 21:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 21:46:17] 2.13.3.0 11541 28027 364764 153266 1 206 29648964 32935936 19451 16776704 0 59833580 99.318 105260797 40315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 21:46:17] CVMFS is ok
[2025-11-24 21:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 21:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 21:46:17] Further information can be found at the LHC@home message board.
[2025-11-24 21:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 21:46:17] Checking for apptainer binary...
[2025-11-24 21:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 21:46:17] Running /usr/bin/apptainer --version
[2025-11-24 21:46:17] apptainer version 1.4.4-1.el9
[2025-11-24 21:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 21:46:17] c6-1-26-1.aglt2.org
[2025-11-24 21:46:17] apptainer works
[2025-11-24 21:46:17] Set ATHENA_PROC_NUMBER=8
[2025-11-24 21:46:17] Set ATHENA_CORE_NUMBER=8
[2025-11-24 21:46:17] Starting ATLAS job with PandaID=6895366385
[2025-11-24 21:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:42:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:42:26] 2025-11-26 02:41:46,929 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:42:26] 2025-11-26 02:41:46,931 | INFO     | sum of square deviations: 871074430997.7344
[2025-11-25 21:42:26] 2025-11-26 02:41:46,963 | INFO     | sum of deviations: 2733497897183.4907
[2025-11-25 21:42:26] 2025-11-26 02:41:46,963 | INFO     | mean x: 1764081834.4294827
[2025-11-25 21:42:26] 2025-11-26 02:41:46,963 | INFO     | mean y: 2990155.281360737
[2025-11-25 21:42:26] 2025-11-26 02:41:46,963 | INFO     | intersect: -5532832976.789345
[2025-11-25 21:42:26] 2025-11-26 02:41:46,965 | INFO     | chi2: 10.200702098464129
[2025-11-25 21:42:26] 2025-11-26 02:41:46,966 | INFO     | sum of square deviations: 861847379969.7067
[2025-11-25 21:42:26] 2025-11-26 02:41:47,042 | INFO     | sum of deviations: 3212282048620.165
[2025-11-25 21:42:26] 2025-11-26 02:41:47,042 | INFO     | mean x: 1764081681.9331436
[2025-11-25 21:42:26] 2025-11-26 02:41:47,042 | INFO     | mean y: 2998066.906116643
[2025-11-25 21:42:26] 2025-11-26 02:41:47,043 | INFO     | intersect: -6572096376.581879
[2025-11-25 21:42:26] 2025-11-26 02:41:47,049 | INFO     | chi2: 7.188082475611113
[2025-11-25 21:42:26] 2025-11-26 02:41:47,049 | INFO     | current chi2=7.188082475611113 (change=29.5334536169487 %)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,051 | INFO     | sum of square deviations: 852685897166.9094
[2025-11-25 21:42:26] 2025-11-26 02:41:47,378 | INFO     | sum of deviations: 3715758541863.217
[2025-11-25 21:42:26] 2025-11-26 02:41:47,378 | INFO     | mean x: 1764081529.4382584
[2025-11-25 21:42:26] 2025-11-26 02:41:47,379 | INFO     | mean y: 3006447.9735902925
[2025-11-25 21:42:26] 2025-11-26 02:41:47,379 | INFO     | intersect: -7684350682.397998
[2025-11-25 21:42:26] 2025-11-26 02:41:47,380 | INFO     | chi2: 3.9564333156819673
[2025-11-25 21:42:26] 2025-11-26 02:41:47,418 | INFO     | current chi2=3.9564333156819673 (change=44.95843183344107 %)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,419 | INFO     | sum of square deviations: 843589407702.3014
[2025-11-25 21:42:26] 2025-11-26 02:41:47,574 | INFO     | sum of deviations: 3955156610781.6484
[2025-11-25 21:42:26] 2025-11-26 02:41:47,574 | INFO     | mean x: 1764081376.941977
[2025-11-25 21:42:26] 2025-11-26 02:41:47,575 | INFO     | mean y: 3010455.575931232
[2025-11-25 21:42:26] 2025-11-26 02:41:47,575 | INFO     | intersect: -8267859301.991105
[2025-11-25 21:42:26] 2025-11-26 02:41:47,576 | INFO     | chi2: 2.7005653263331375
[2025-11-25 21:42:26] 2025-11-26 02:41:47,576 | INFO     | current chi2=2.7005653263331375 (change=31.74242781676599 %)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,577 | INFO     | sum of square deviations: 834557423547.0918
[2025-11-25 21:42:26] 2025-11-26 02:41:47,626 | INFO     | sum of deviations: 3965137778646.3745
[2025-11-25 21:42:26] 2025-11-26 02:41:47,627 | INFO     | mean x: 1764081224.442128
[2025-11-25 21:42:26] 2025-11-26 02:41:47,627 | INFO     | mean y: 3010622.942487419
[2025-11-25 21:42:26] 2025-11-26 02:41:47,627 | INFO     | intersect: -8378467883.241498
[2025-11-25 21:42:26] 2025-11-26 02:41:47,634 | INFO     | chi2: 2.6585786986324553
[2025-11-25 21:42:26] 2025-11-26 02:41:47,635 | INFO     | current chi2=2.6585786986324553 (change=1.5547347546556913 %)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,635 | INFO     | right removable region: 1390
[2025-11-25 21:42:26] 2025-11-26 02:41:47,641 | INFO     | sum of square deviations: 861846321859.9801
[2025-11-25 21:42:26] 2025-11-26 02:41:47,740 | INFO     | sum of deviations: 2323265163084.8257
[2025-11-25 21:42:26] 2025-11-26 02:41:47,741 | INFO     | mean x: 1764081986.9345663
[2025-11-25 21:42:26] 2025-11-26 02:41:47,741 | INFO     | mean y: 2996928.7916073967
[2025-11-25 21:42:26] 2025-11-26 02:41:47,741 | INFO     | intersect: -4752410295.34735
[2025-11-25 21:42:26] 2025-11-26 02:41:47,747 | INFO     | chi2: 7.8575810461997895
[2025-11-25 21:42:26] 2025-11-26 02:41:47,748 | INFO     | current chi2=7.8575810461997895 (change=22.970193910643975 %)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,748 | INFO     | left removable region: 10
[2025-11-25 21:42:26] 2025-11-26 02:41:47,754 | INFO     | sum of square deviations: 814913415165.7452
[2025-11-25 21:42:26] 2025-11-26 02:41:47,801 | INFO     | sum of deviations: 3466018925333.4707
[2025-11-25 21:42:26] 2025-11-26 02:41:47,801 | INFO     | mean x: 1764081498.9514494
[2025-11-25 21:42:26] 2025-11-26 02:41:47,801 | INFO     | mean y: 3018931.5891304347
[2025-11-25 21:42:26] 2025-11-26 02:41:47,801 | INFO     | intersect: -7500035684.284098
[2025-11-25 21:42:26] 2025-11-26 02:41:47,803 | INFO     | chi2: 0.24478595661154107
[2025-11-25 21:42:26] 2025-11-26 02:41:47,803 | INFO     | current memory leak: 4.25 B/s (using 1380 data points, chi2=0.24)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,804 | INFO     | could have reported an average CPU frequency of 2845 MHz (50 samples)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | ..............................
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . Timing measurements:
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . get job = 0 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . initial setup = 2 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . payload setup = 8 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . stage-in = 0 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . payload execution = 86043 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . stage-out = 10 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | . log creation = 3 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,805 | INFO     | ..............................
[2025-11-25 21:42:26] 2025-11-26 02:41:47,965 | INFO     | 
[2025-11-25 21:42:26] 2025-11-26 02:41:47,965 | INFO     | job summary report
[2025-11-25 21:42:26] 2025-11-26 02:41:47,965 | INFO     | --------------------------------------------------
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | PanDA job id: 6895366385
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | task id: 47556137
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | errors: (none)
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | pilot state: finished 
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | transexitcode: 0
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | exeerrorcode: 0
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | exeerrordiag: 
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | exitcode: 0
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | exitmsg: OK
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | cpuconsumptiontime: 255495 s
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | nevents: 1000
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | neventsw: 0
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | pid: 364837
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | pgrp: 364837
[2025-11-25 21:42:26] 2025-11-26 02:41:47,966 | INFO     | corecount: 8
[2025-11-25 21:42:26] 2025-11-26 02:41:47,967 | INFO     | event service: False
[2025-11-25 21:42:26] 2025-11-26 02:41:47,967 | INFO     | sizes: {0: 2284259, 6: 2284521, 11: 2284549, 86056: 2349611, 86057: 2349610, 86068: 2358665, 86071: 2358849, 86095: 2359095}
[2025-11-25 21:42:26] 2025-11-26 02:41:47,967 | INFO     | --------------------------------------------------
[2025-11-25 21:42:26] 2025-11-26 02:41:47,967 | INFO     | 
[2025-11-25 21:42:26] 2025-11-26 02:41:47,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:42:26] 2025-11-26 02:41:48,018 | INFO     | job 6895366385 has completed (purged errors)
[2025-11-25 21:42:26] 2025-11-26 02:41:48,018 | INFO     | overall cleanup function is called
[2025-11-25 21:42:26] 2025-11-26 02:41:49,046 | INFO     | --- collectZombieJob: --- 10, [364837]
[2025-11-25 21:42:26] 2025-11-26 02:41:49,046 | INFO     | zombie collector waiting for pid 364837
[2025-11-25 21:42:26] 2025-11-26 02:41:49,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:42:26] 2025-11-26 02:41:49,047 | INFO     | collected zombie processes
[2025-11-25 21:42:26] 2025-11-26 02:41:49,047 | INFO     | will attempt to kill all subprocesses of pid=364837
[2025-11-25 21:42:26] 2025-11-26 02:41:49,975 | INFO     | process IDs to be killed: [364837] (in reverse order)
[2025-11-25 21:42:26] 2025-11-26 02:41:50,170 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:42:26] 2025-11-26 02:41:50,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:42:26] 2025-11-26 02:41:50,202 | INFO     | did not find any defunct processes belonging to 364837
[2025-11-25 21:42:26] 2025-11-26 02:41:50,229 | INFO     | did not find any defunct processes belonging to 364837
[2025-11-25 21:42:26] 2025-11-26 02:41:50,234 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:42:26] 2025-11-26 02:41:50,238 | INFO     | ready for new job
[2025-11-25 21:42:26] 2025-11-26 02:41:50,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:42:26] 2025-11-26 02:41:50,248 | INFO     | ***************************************
[2025-11-25 21:42:26] 2025-11-26 02:41:50,249 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:42:26] 2025-11-26 02:41:50,249 | INFO     | ***************************************
[2025-11-25 21:42:26] 2025-11-26 02:41:50,249 | INFO     | 
[2025-11-25 21:42:26] 2025-11-26 02:41:50,256 | INFO     | architecture information:
[2025-11-25 21:42:26] 2025-11-26 02:41:50,257 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:42:26] 2025-11-26 02:41:50,297 | INFO     | cat /etc/os-release:
[2025-11-25 21:42:26] NAME="CentOS Linux"
[2025-11-25 21:42:26] VERSION="7 (Core)"
[2025-11-25 21:42:26] ID="centos"
[2025-11-25 21:42:26] ID_LIKE="rhel fedora"
[2025-11-25 21:42:26] VERSION_ID="7"
[2025-11-25 21:42:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:42:26] ANSI_COLOR="0;31"
[2025-11-25 21:42:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:42:26] HOME_URL="https://www.centos.org/"
[2025-11-25 21:42:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:42:26] 
[2025-11-25 21:42:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:42:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:42:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:42:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:42:26] 
[2025-11-25 21:42:26] 2025-11-26 02:41:50,298 | INFO     | ***************************************
[2025-11-25 21:42:26] 2025-11-26 02:41:50,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 21:42:26] 2025-11-26 02:41:50,850 | INFO     | sufficient remaining disk space (71383908352 B)
[2025-11-25 21:42:26] 2025-11-26 02:41:50,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:42:26] 2025-11-26 02:41:50,850 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:42:26] 2025-11-26 02:41:50,850 | INFO     | update_server=False
[2025-11-25 21:42:26] 2025-11-26 02:41:50,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:42:26] 2025-11-26 02:41:50,960 | INFO     | all data control threads have been joined
[2025-11-25 21:42:26] 2025-11-26 02:41:51,234 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 21:42:26] 2025-11-26 02:41:51,235 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 21:42:26] 2025-11-26 02:41:51,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:42:26] 2025-11-26 02:41:51,235 | INFO     | will abort loop
[2025-11-25 21:42:26] 2025-11-26 02:41:51,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:42:26] 2025-11-26 02:41:51,471 | INFO     | all job control threads have been joined
[2025-11-25 21:42:26] 2025-11-26 02:41:51,783 | INFO     | all payload control threads have been joined
[2025-11-25 21:42:26] 2025-11-26 02:41:51,856 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:51,966 | INFO     | [data] control thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,049 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,240 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,255 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:42:26] 2025-11-26 02:41:52,335 | INFO     | [job] validate thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,477 | INFO     | [job] control thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,576 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,789 | INFO     | [payload] control thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:52,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:42:26] 2025-11-26 02:41:53,160 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:53,189 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:53,324 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:53,331 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:53,990 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:41:56,291 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:42:26] 2025-11-26 02:42:09,546 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:42:26] 2025-11-26 02:42:11,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299414923072)>', '<ExcThread(monitor, started 140298906748672)>']
[2025-11-25 21:42:26] 2025-11-26 02:42:16,552 | INFO     | all workflow threads have been joined
[2025-11-25 21:42:26] 2025-11-26 02:42:16,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:42:26] 2025-11-26 02:42:16,553 | INFO     | traces error code: 0
[2025-11-25 21:42:26] 2025-11-26 02:42:16,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:42:26] 2025-11-26 02:42:25,278 | INFO     | PID=353591 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | INFO     | .. there are 24 such processes running
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:42:26] 2025-11-26 02:42:25,279 | INFO     | [monitor] control thread has ended
[2025-11-25 21:42:26] 2025-11-26 02:42:26,315 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:42:26] 2025-11-26 02:42:26,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:42:26] 2025-11-26 02:42:26,322 [wrapper] pilotpid: 353591
[2025-11-25 21:42:26] 2025-11-26 02:42:26,324 [wrapper] Pilot exit status: 0
[2025-11-25 21:42:26] 2025-11-26 02:42:26,334 [wrapper] pandaids: 6895366385
[2025-11-25 21:42:26] 2025-11-26 02:42:26,450 [wrapper] cleanup supervisor_pilot  737649 353592
[2025-11-25 21:42:26] 2025-11-26 02:42:26,466 [wrapper] Test setup, not cleaning
[2025-11-25 21:42:26] 2025-11-26 02:42:26,478 [wrapper] apfmon messages muted
[2025-11-25 21:42:26] 2025-11-26 02:42:26,481 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:42:26] 2025-11-26 02:42:26,485 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:42:26]  *** Error codes and diagnostics ***
[2025-11-25 21:42:26]     "exeErrorCode": 0,
[2025-11-25 21:42:26]     "exeErrorDiag": "",
[2025-11-25 21:42:26]     "pilotErrorCode": 0,
[2025-11-25 21:42:26]     "pilotErrorDiag": "",
[2025-11-25 21:42:26]  *** Listing of results directory ***
[2025-11-25 21:42:26] total 1331084
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 13:36 queuedata.json
[2025-11-25 21:42:26] -rwx------. 1 boincer umatlas     36292 Nov 23 13:37 runpilot2-wrapper.sh
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas       100 Nov 24 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:42:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 21:46 run_atlas
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas       105 Nov 24 21:46 job.xml
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas 410162112 Nov 24 21:46 EVNT.47483658._000844.pool.root.1
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 21:46 start_atlas.sh
[2025-11-25 21:42:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 21:46 shared
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 21:46 input.tar.gz
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas         0 Nov 24 21:46 boinc_lockfile
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 21:46 pandaJob.out
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas        57 Nov 24 21:46 setup.sh.local
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas    991801 Nov 24 21:46 agis_schedconf.cvmfs.json
[2025-11-25 21:42:26] drwx------. 5 boincer umatlas      4096 Nov 24 21:46 pilot3
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas       533 Nov 25 21:22 boinc_task_state.xml
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 21:38 init_data.xml
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas 922204218 Nov 25 21:39 HITS.47556137._008310.pool.root.1
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas      1058 Nov 25 21:41 memory_monitor_summary.json
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas   1516240 Nov 25 21:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas   2430089 Nov 25 21:41 log.47556137._008310.job.log.tgz.1
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas        95 Nov 25 21:41 pilot_heartbeat.json
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas      8631 Nov 25 21:41 heartbeat.json
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 21:42 boinc_mmap_file
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas        29 Nov 25 21:42 wrapper_checkpoint.txt
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas       822 Nov 25 21:42 pilotlog.txt
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas  10943212 Nov 25 21:42 log.47556137._008310.job.log.1
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas       353 Nov 25 21:42 output.list
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas       620 Nov 25 21:42 runtime_log
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas  13393920 Nov 25 21:42 result.tar.gz
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 21:42 runtime_log.err
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas       661 Nov 25 21:42 ifoNDmf8Th8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXgIKDm2Kivym.diag
[2025-11-25 21:42:26] -rw-r--r--. 1 boincer umatlas     21149 Nov 25 21:42 stderr.txt
[2025-11-25 21:42:26] HITS file was successfully produced:
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas 922204218 Nov 25 21:39 shared/HITS.pool.root.1
[2025-11-25 21:42:26]  *** Contents of shared directory: ***
[2025-11-25 21:42:26] total 1314824
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas 410162112 Nov 24 21:46 ATLAS.root_0
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 21:46 start_atlas.sh
[2025-11-25 21:42:26] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 21:46 input.tar.gz
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas 922204218 Nov 25 21:39 HITS.pool.root.1
[2025-11-25 21:42:26] -rw-------. 1 boincer umatlas  13393920 Nov 25 21:42 result.tar.gz
21:42:28 (348157): run_atlas exited; CPU time 257291.682162
21:42:28 (348157): called boinc_finish(0)

</stderr_txt>
]]>

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