Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:20 (2109637): wrapper (7.7.26015): starting
10:42:20 (2109637): wrapper: running run_atlas (--nthreads 11)
[2025-11-24 10:42:20] Arguments: --nthreads 11
[2025-11-24 10:42:20] Threads: 11
[2025-11-24 10:42:20] Checking for CVMFS
[2025-11-24 10:42:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:42:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:42:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:42:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:42:22] 2.13.3.0 7314 27303 163932 153250 3 597 22498194 40960000 38832 16776704 0 406290556 99.767 230522346 49787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 10:42:22] CVMFS is ok
[2025-11-24 10:42:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:42:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:42:22] Further information can be found at the LHC@home message board.
[2025-11-24 10:42:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:42:22] Checking for apptainer binary...
[2025-11-24 10:42:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:42:22] Running /usr/bin/apptainer --version
[2025-11-24 10:42:22] apptainer version 1.4.4-1.el9
[2025-11-24 10:42:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:42:23] c8-16-1.aglt2.org
[2025-11-24 10:42:23] apptainer works
[2025-11-24 10:42:23] Set ATHENA_PROC_NUMBER=11
[2025-11-24 10:42:23] Set ATHENA_CORE_NUMBER=11
[2025-11-24 10:42:23] Starting ATLAS job with PandaID=6895355243
[2025-11-24 10:42:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:18:46]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:18:46] 2025-11-24 21:46:54,829 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:18:46] 2025-11-24 21:46:54,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:18:46] 2025-11-24 21:46:54,832 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:18:46] 2025-11-24 21:46:54,832 | INFO     | sum of square deviations: 14107766394.862766
[2025-11-24 17:18:46] 2025-11-24 21:46:54,834 | INFO     | sum of deviations: -72182948772.43138
[2025-11-24 17:18:46] 2025-11-24 21:46:54,834 | INFO     | mean x: 1764009900.0196078
[2025-11-24 17:18:46] 2025-11-24 21:46:54,834 | INFO     | mean y: 3201050.4901960786
[2025-11-24 17:18:46] 2025-11-24 21:46:54,836 | INFO     | intersect: 9028827977.056255
[2025-11-24 17:18:46] 2025-11-24 21:46:54,837 | INFO     | chi2: 14.102387390984585
[2025-11-24 17:18:46] 2025-11-24 21:46:54,837 | INFO     | sum of square deviations: 13523454389.178926
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | sum of deviations: 78382822075.34406
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | mean x: 1764009747.5482955
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | mean y: 3240322.65625
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | intersect: -10221075018.83584
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | chi2: 9.576149621830277
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | current chi2=9.576149621830277 (change=32.09554271674493 %)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,839 | INFO     | sum of square deviations: 12955514782.899038
[2025-11-24 17:18:46] 2025-11-24 21:46:54,841 | INFO     | sum of deviations: 229236906423.213
[2025-11-24 17:18:46] 2025-11-24 21:46:54,841 | INFO     | mean x: 1764009595.0778098
[2025-11-24 17:18:46] 2025-11-24 21:46:54,841 | INFO     | mean y: 3280812.8069164264
[2025-11-24 17:18:46] 2025-11-24 21:46:54,841 | INFO     | intersect: -31209381073.100414
[2025-11-24 17:18:46] 2025-11-24 21:46:54,841 | INFO     | chi2: 5.346871571829901
[2025-11-24 17:18:46] 2025-11-24 21:46:54,842 | INFO     | current chi2=5.346871571829901 (change=44.1647031115627 %)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,842 | INFO     | sum of square deviations: 12403715013.497187
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | sum of deviations: 352375657348.9355
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | mean x: 1764009442.6081872
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | mean y: 3314752.880116959
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | intersect: -50110218670.9689
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | chi2: 2.326639332236325
[2025-11-24 17:18:46] 2025-11-24 21:46:54,843 | INFO     | current chi2=2.326639332236325 (change=56.485969393873795 %)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,844 | INFO     | sum of square deviations: 11867593662.154339
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | sum of deviations: 347267528143.8931
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | mean x: 1764009290.1068249
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | mean y: 3313283.002967359
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | intersect: -51614829639.414696
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | chi2: 2.3020165886970325
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | current chi2=2.3020165886970325 (change=1.05829653948235 %)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,845 | INFO     | right removable region: 336
[2025-11-24 17:18:46] 2025-11-24 21:46:54,846 | INFO     | sum of square deviations: 13523057773.360752
[2025-11-24 17:18:46] 2025-11-24 21:46:54,847 | INFO     | sum of deviations: -170940004542.7444
[2025-11-24 17:18:46] 2025-11-24 21:46:54,847 | INFO     | mean x: 1764010052.5426137
[2025-11-24 17:18:46] 2025-11-24 21:46:54,847 | INFO     | mean y: 3226688.9829545454
[2025-11-24 17:18:46] 2025-11-24 21:46:54,847 | INFO     | intersect: 22301429613.8487
[2025-11-24 17:18:46] 2025-11-24 21:46:54,847 | INFO     | chi2: 12.068553209696395
[2025-11-24 17:18:46] 2025-11-24 21:46:54,848 | INFO     | current chi2=12.068553209696395 (change=14.421913998677882 %)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,848 | INFO     | left removable region: 10
[2025-11-24 17:18:46] 2025-11-24 21:46:54,848 | INFO     | sum of square deviations: 10742726401.831322
[2025-11-24 17:18:46] 2025-11-24 21:46:54,849 | INFO     | sum of deviations: 224864642223.9695
[2025-11-24 17:18:46] 2025-11-24 21:46:54,849 | INFO     | mean x: 1764009564.6533742
[2025-11-24 17:18:46] 2025-11-24 21:46:54,849 | INFO     | mean y: 3348252.300613497
[2025-11-24 17:18:46] 2025-11-24 21:46:54,849 | INFO     | intersect: -36920554004.74855
[2025-11-24 17:18:46] 2025-11-24 21:46:54,849 | INFO     | chi2: 0.04327167139500549
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | current memory leak: 20.93 B/s (using 326 data points, chi2=0.04)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | could have reported an average CPU frequency of 3783 MHz (15 samples)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | ..............................
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . Timing measurements:
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . get job = 0 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . initial setup = 4 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . payload setup = 16 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . stage-in = 0 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . payload execution = 21733 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . stage-out = 8 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | . log creation = 2 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,850 | INFO     | ..............................
[2025-11-24 17:18:46] 2025-11-24 21:46:54,899 | INFO     | 
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | job summary report
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | --------------------------------------------------
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | PanDA job id: 6895355243
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | task id: 47556137
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | errors: (none)
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | pilot state: finished 
[2025-11-24 17:18:46] 2025-11-24 21:46:54,921 | INFO     | transexitcode: 0
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | exeerrorcode: 0
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | exeerrordiag: 
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | exitcode: 0
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | exitmsg: OK
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | cpuconsumptiontime: 141181 s
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | nevents: 1000
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | neventsw: 0
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | pid: 2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | pgrp: 2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | corecount: 11
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | event service: False
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | sizes: {0: 2284083, 1: 2284167, 2: 2284366, 12: 2284366, 15: 2284656, 23: 2284684, 21756: 2319869, 21757: 2319868, 21765: 2328918, 21767: 2328974, 21803: 2329220}
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | --------------------------------------------------
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | 
[2025-11-24 17:18:46] 2025-11-24 21:46:54,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 17:18:46] 2025-11-24 21:46:55,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:18:46] 2025-11-24 21:46:55,097 | INFO     | job 6895355243 has completed (purged errors)
[2025-11-24 17:18:46] 2025-11-24 21:46:55,098 | INFO     | overall cleanup function is called
[2025-11-24 17:18:46] 2025-11-24 21:46:56,209 | INFO     | --- collectZombieJob: --- 10, [2129640]
[2025-11-24 17:18:46] 2025-11-24 21:46:56,209 | INFO     | zombie collector waiting for pid 2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:56,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:18:46] 2025-11-24 21:46:56,209 | INFO     | collected zombie processes
[2025-11-24 17:18:46] 2025-11-24 21:46:56,209 | INFO     | will attempt to kill all subprocesses of pid=2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:58,232 | INFO     | process IDs to be killed: [2129640] (in reverse order)
[2025-11-24 17:18:46] 2025-11-24 21:46:58,450 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:18:46] 2025-11-24 21:46:58,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:18:46] 2025-11-24 21:46:58,491 | INFO     | did not find any defunct processes belonging to 2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:58,525 | INFO     | did not find any defunct processes belonging to 2129640
[2025-11-24 17:18:46] 2025-11-24 21:46:58,527 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:18:46] 2025-11-24 21:46:58,527 | INFO     | ready for new job
[2025-11-24 17:18:46] 2025-11-24 21:46:58,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:18:46] 2025-11-24 21:46:58,546 | INFO     | ***************************************
[2025-11-24 17:18:46] 2025-11-24 21:46:58,546 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:18:46] 2025-11-24 21:46:58,546 | INFO     | ***************************************
[2025-11-24 17:18:46] 2025-11-24 21:46:58,546 | INFO     | 
[2025-11-24 17:18:46] 2025-11-24 21:46:58,551 | INFO     | architecture information:
[2025-11-24 17:18:46] 2025-11-24 21:46:58,551 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:18:46] 2025-11-24 21:46:58,625 | INFO     | cat /etc/os-release:
[2025-11-24 17:18:46] NAME="CentOS Linux"
[2025-11-24 17:18:46] VERSION="7 (Core)"
[2025-11-24 17:18:46] ID="centos"
[2025-11-24 17:18:46] ID_LIKE="rhel fedora"
[2025-11-24 17:18:46] VERSION_ID="7"
[2025-11-24 17:18:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:18:46] ANSI_COLOR="0;31"
[2025-11-24 17:18:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:18:46] HOME_URL="https://www.centos.org/"
[2025-11-24 17:18:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:18:46] 
[2025-11-24 17:18:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:18:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:18:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:18:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:18:46] 
[2025-11-24 17:18:46] 2025-11-24 21:46:58,625 | INFO     | ***************************************
[2025-11-24 17:18:46] 2025-11-24 21:46:59,128 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 17:18:46] 2025-11-24 21:46:59,279 | INFO     | sufficient remaining disk space (159900499968 B)
[2025-11-24 17:18:46] 2025-11-24 21:46:59,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:18:46] 2025-11-24 21:46:59,280 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:18:46] 2025-11-24 21:46:59,280 | INFO     | update_server=False
[2025-11-24 17:18:46] 2025-11-24 21:46:59,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:18:46] 2025-11-24 21:46:59,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:18:46] 2025-11-24 21:46:59,285 | INFO     | aborting loop
[2025-11-24 17:18:46] 2025-11-24 21:46:59,852 | INFO     | all data control threads have been joined
[2025-11-24 17:18:46] 2025-11-24 21:46:59,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:18:46] 2025-11-24 21:47:00,164 | INFO     | all payload control threads have been joined
[2025-11-24 17:18:46] 2025-11-24 21:47:00,288 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,292 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,292 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:18:46] 2025-11-24 21:47:00,651 | INFO     | all job control threads have been joined
[2025-11-24 17:18:46] 2025-11-24 21:47:00,833 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,856 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,882 | INFO     | [data] control thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:00,953 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:18:46] 2025-11-24 21:47:01,145 | INFO     | [job] validate thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,202 | INFO     | [payload] control thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,247 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,277 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:01,667 | INFO     | [job] control thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:02,604 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:05,013 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:18:46] 2025-11-24 21:47:28,296 | INFO     | PID=2121077 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 17:18:46] 2025-11-24 21:47:28,297 | INFO     | .. there are 60 such processes running
[2025-11-24 17:18:46] 2025-11-24 21:47:28,297 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:18:46] 2025-11-24 21:47:28,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:18:46] 2025-11-24 21:47:28,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:18:46] 2025-11-24 21:47:34,901 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:18:46] 2025-11-24 21:47:35,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746198505280)>', '<ExcThread(monitor, started 139744738535168)>']
[2025-11-24 17:18:46] 2025-11-24 21:47:35,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:18:46] 2025-11-24 21:47:35,367 | INFO     | [monitor] control thread has ended
[2025-11-24 17:18:46] 2025-11-24 21:47:40,202 | INFO     | all workflow threads have been joined
[2025-11-24 17:18:46] 2025-11-24 21:47:40,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:18:46] 2025-11-24 21:47:40,231 | INFO     | traces error code: 0
[2025-11-24 17:18:46] 2025-11-24 21:47:40,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:18:46] 2025-11-24 21:47:42,152 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:18:46] 2025-11-24 21:47:42,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:18:46] 2025-11-24 21:47:42,261 [wrapper] pilotpid: 2121077
[2025-11-24 17:18:46] 2025-11-24 21:47:42,305 [wrapper] Pilot exit status: 0
[2025-11-24 17:18:46] 2025-11-24 21:47:42,438 [wrapper] pandaids: 6895355243
[2025-11-24 17:18:46] 2025-11-24 21:47:42,728 [wrapper] cleanup supervisor_pilot  271551 2121078
[2025-11-24 17:18:46] 2025-11-24 21:47:42,777 [wrapper] Test setup, not cleaning
[2025-11-24 17:18:46] 2025-11-24 21:47:42,822 [wrapper] apfmon messages muted
[2025-11-24 17:18:46] 2025-11-24 21:47:42,864 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:18:46] 2025-11-24 21:47:42,886 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:18:46]  *** Error codes and diagnostics ***
[2025-11-24 17:18:46]     "exeErrorCode": 0,
[2025-11-24 17:18:46]     "exeErrorDiag": "",
[2025-11-24 17:18:46]     "pilotErrorCode": 0,
[2025-11-24 17:18:46]     "pilotErrorDiag": "",
[2025-11-24 17:18:46]  *** Listing of results directory ***
[2025-11-24 17:18:46] total 1321264
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 01:48 pilot3.tar.gz
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 02:06 queuedata.json
[2025-11-24 17:18:46] -rwx------. 1 boincer umatlas     36292 Nov 23 02:06 runpilot2-wrapper.sh
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas       100 Nov 24 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:18:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 10:42 run_atlas
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas       105 Nov 24 10:42 job.xml
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas 410816228 Nov 24 10:42 EVNT.47483658._000653.pool.root.1
[2025-11-24 17:18:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 10:42 shared
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas    590108 Nov 24 10:42 input.tar.gz
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:42 start_atlas.sh
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas         0 Nov 24 10:42 boinc_lockfile
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 10:42 pandaJob.out
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas        57 Nov 24 10:42 setup.sh.local
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas    987541 Nov 24 10:42 agis_schedconf.cvmfs.json
[2025-11-24 17:18:46] drwx------. 5 boincer umatlas      4096 Nov 24 10:42 pilot3
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas       532 Nov 24 16:30 boinc_task_state.xml
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas 928677383 Nov 24 16:44 HITS.47556137._006488.pool.root.1
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas      1085 Nov 24 16:46 memory_monitor_summary.json
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas   1516227 Nov 24 16:46 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas   1968321 Nov 24 16:46 log.47556137._006488.job.log.tgz.1
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas        95 Nov 24 16:46 pilot_heartbeat.json
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas      8642 Nov 24 16:46 heartbeat.json
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas      4825 Nov 24 16:47 pilotlog.txt
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas   2815805 Nov 24 16:47 log.47556137._006488.job.log.1
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas       353 Nov 24 16:47 output.list
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas       620 Nov 24 16:47 runtime_log
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas   4802560 Nov 24 16:47 result.tar.gz
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas       665 Nov 24 16:47 uZ5NDmQMJh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2SIKDmRzZ5So.diag
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas      9340 Nov 24 16:47 runtime_log.err
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas      7174 Nov 24 17:18 init_data.xml
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas        29 Nov 24 17:18 wrapper_checkpoint.txt
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 17:18 boinc_mmap_file
[2025-11-24 17:18:46] -rw-r--r--. 1 boincer umatlas     17786 Nov 24 17:18 stderr.txt
[2025-11-24 17:18:46] HITS file was successfully produced:
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas 928677383 Nov 24 16:44 shared/HITS.pool.root.1
[2025-11-24 17:18:46]  *** Contents of shared directory: ***
[2025-11-24 17:18:46] total 1313396
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas 410816228 Nov 24 10:42 ATLAS.root_0
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas    590108 Nov 24 10:42 input.tar.gz
[2025-11-24 17:18:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:42 start_atlas.sh
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas 928677383 Nov 24 16:44 HITS.pool.root.1
[2025-11-24 17:18:46] -rw-------. 1 boincer umatlas   4802560 Nov 24 16:47 result.tar.gz
17:18:48 (2109637): run_atlas exited; CPU time 141261.066177
17:18:48 (2109637): called boinc_finish(0)

</stderr_txt>
]]>

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