Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:43:22 (19736): wrapper (7.7.26015): starting
09:43:22 (19736): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:43:22] Arguments: --nthreads 8
[2025-11-24 09:43:22] Threads: 8
[2025-11-24 09:43:22] Checking for CVMFS
[2025-11-24 09:43:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:43:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:43:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:43:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:43:22] 2.11.2.0 4697 114920 131880 153248 0 81 15839370 18432000 943 130560 0 81833553 99.973 4894345 32137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:43:22] CVMFS is ok
[2025-11-24 09:43:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:43:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:43:22] Further information can be found at the LHC@home message board.
[2025-11-24 09:43:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:43:22] Checking for apptainer binary...
[2025-11-24 09:43:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:43:22] Running /usr/bin/apptainer --version
[2025-11-24 09:43:22] apptainer version 1.3.2-1.el7
[2025-11-24 09:43:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:43:23] c-206-21.aglt2.org
[2025-11-24 09:43:23] apptainer works
[2025-11-24 09:43:23] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:43:23] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:43:23] Starting ATLAS job with PandaID=6895365896
[2025-11-24 09:43:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:00:35]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:00:35] 2025-11-25 09:59:31,023 | INFO     | monitor loop #4933: job 0:6895365896 is in state 'finished'
[2025-11-25 05:00:35] 2025-11-25 09:59:31,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:00:35] 2025-11-25 09:59:31,230 | INFO     | time since job start (69357s) is within the limit (172800.0s)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,687 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 05:00:35] 2025-11-25 09:59:32,695 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2494.5833333333335
[2025-11-25 05:00:35] 2025-11-25 09:59:32,700 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895365896/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,701 | INFO     | extracted standard info from prmon json
[2025-11-25 05:00:35] 2025-11-25 09:59:32,701 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:00:35] 2025-11-25 09:59:32,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:00:35] 2025-11-25 09:59:32,731 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:00:35] 2025-11-25 09:59:32,733 | INFO     | sum of square deviations: 455784353928.2286
[2025-11-25 05:00:35] 2025-11-25 09:59:32,775 | INFO     | sum of deviations: 2233129529258.932
[2025-11-25 05:00:35] 2025-11-25 09:59:32,775 | INFO     | mean x: 1764030087.583993
[2025-11-25 05:00:35] 2025-11-25 09:59:32,776 | INFO     | mean y: 2863267.424802111
[2025-11-25 05:00:35] 2025-11-25 09:59:32,776 | INFO     | intersect: -8640056668.579296
[2025-11-25 05:00:35] 2025-11-25 09:59:32,777 | INFO     | chi2: 5.083174905899901
[2025-11-25 05:00:35] 2025-11-25 09:59:32,779 | INFO     | sum of square deviations: 449797969781.5158
[2025-11-25 05:00:35] 2025-11-25 09:59:32,820 | INFO     | sum of deviations: 2568976783750.831
[2025-11-25 05:00:35] 2025-11-25 09:59:32,821 | INFO     | mean x: 1764029935.0865724
[2025-11-25 05:00:35] 2025-11-25 09:59:32,821 | INFO     | mean y: 2871817.613957597
[2025-11-25 05:00:35] 2025-11-25 09:59:32,821 | INFO     | intersect: -10072211338.675379
[2025-11-25 05:00:35] 2025-11-25 09:59:32,823 | INFO     | chi2: 2.4635540012057677
[2025-11-25 05:00:35] 2025-11-25 09:59:32,823 | INFO     | current chi2=2.4635540012057677 (change=51.53513214061574 %)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,824 | INFO     | sum of square deviations: 443864237784.78766
[2025-11-25 05:00:35] 2025-11-25 09:59:32,866 | INFO     | sum of deviations: 2651592934848.3555
[2025-11-25 05:00:35] 2025-11-25 09:59:32,866 | INFO     | mean x: 1764029782.5891747
[2025-11-25 05:00:35] 2025-11-25 09:59:32,866 | INFO     | mean y: 2873936.881987578
[2025-11-25 05:00:35] 2025-11-25 09:59:32,866 | INFO     | intersect: -10535233236.878351
[2025-11-25 05:00:35] 2025-11-25 09:59:32,868 | INFO     | chi2: 2.1457769928857187
[2025-11-25 05:00:35] 2025-11-25 09:59:32,868 | INFO     | current chi2=2.1457769928857187 (change=12.899128988628442 %)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,868 | INFO     | right removable region: 1126
[2025-11-25 05:00:35] 2025-11-25 09:59:32,870 | INFO     | sum of square deviations: 449797564741.51605
[2025-11-25 05:00:35] 2025-11-25 09:59:32,912 | INFO     | sum of deviations: 1969755569894.7659
[2025-11-25 05:00:35] 2025-11-25 09:59:32,912 | INFO     | mean x: 1764030240.0865724
[2025-11-25 05:00:35] 2025-11-25 09:59:32,912 | INFO     | mean y: 2869967.0636042403
[2025-11-25 05:00:35] 2025-11-25 09:59:32,912 | INFO     | intersect: -7722179395.687233
[2025-11-25 05:00:35] 2025-11-25 09:59:32,914 | INFO     | chi2: 3.311118680003231
[2025-11-25 05:00:35] 2025-11-25 09:59:32,914 | INFO     | current chi2=3.311118680003231 (change=34.86120896292381 %)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,916 | INFO     | sum of square deviations: 443863427704.7876
[2025-11-25 05:00:35] 2025-11-25 09:59:32,958 | INFO     | sum of deviations: 1883386972368.2263
[2025-11-25 05:00:35] 2025-11-25 09:59:32,959 | INFO     | mean x: 1764030392.5891747
[2025-11-25 05:00:35] 2025-11-25 09:59:32,959 | INFO     | mean y: 2872186.395740905
[2025-11-25 05:00:35] 2025-11-25 09:59:32,959 | INFO     | intersect: -7482204647.809547
[2025-11-25 05:00:35] 2025-11-25 09:59:32,960 | INFO     | chi2: 3.233944045967455
[2025-11-25 05:00:35] 2025-11-25 09:59:32,961 | INFO     | current chi2=3.233944045967455 (change=2.3307722100646924 %)
[2025-11-25 05:00:35] 2025-11-25 09:59:32,961 | INFO     | left removable region: 20
[2025-11-25 05:00:35] 2025-11-25 09:59:32,963 | INFO     | sum of square deviations: 419511268992.5957
[2025-11-25 05:00:35] 2025-11-25 09:59:33,003 | INFO     | sum of deviations: 2183862397894.1213
[2025-11-25 05:00:35] 2025-11-25 09:59:33,003 | INFO     | mean x: 1764030362.0922241
[2025-11-25 05:00:35] 2025-11-25 09:59:33,004 | INFO     | mean y: 2886244.97920434
[2025-11-25 05:00:35] 2025-11-25 09:59:33,004 | INFO     | intersect: -9180179530.030415
[2025-11-25 05:00:35] 2025-11-25 09:59:33,005 | INFO     | chi2: 0.24089485767411617
[2025-11-25 05:00:35] 2025-11-25 09:59:33,006 | INFO     | current memory leak: 5.21 B/s (using 1106 data points, chi2=0.24)
[2025-11-25 05:00:35] 2025-11-25 09:59:33,007 | INFO     | could have reported an average CPU frequency of 2603 MHz (41 samples)
[2025-11-25 05:00:35] 2025-11-25 09:59:33,007 | INFO     | ..............................
[2025-11-25 05:00:35] 2025-11-25 09:59:33,007 | INFO     | . Timing measurements:
[2025-11-25 05:00:35] 2025-11-25 09:59:33,007 | INFO     | . get job = 0 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . initial setup = 2 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . payload setup = 5 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . stage-in = 0 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . payload execution = 69323 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . stage-out = 4 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,008 | INFO     | . log creation = 0 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,009 | INFO     | ..............................
[2025-11-25 05:00:35] 2025-11-25 09:59:33,162 | INFO     | 
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | job summary report
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | --------------------------------------------------
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | PanDA job id: 6895365896
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | task id: 47556137
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | errors: (none)
[2025-11-25 05:00:35] 2025-11-25 09:59:33,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:00:35] 2025-11-25 09:59:33,164 | INFO     | pilot state: finished 
[2025-11-25 05:00:35] 2025-11-25 09:59:33,164 | INFO     | transexitcode: 0
[2025-11-25 05:00:35] 2025-11-25 09:59:33,164 | INFO     | exeerrorcode: 0
[2025-11-25 05:00:35] 2025-11-25 09:59:33,164 | INFO     | exeerrordiag: 
[2025-11-25 05:00:35] 2025-11-25 09:59:33,164 | INFO     | exitcode: 0
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | exitmsg: OK
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | cpuconsumptiontime: 538281 s
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | nevents: 1000
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | neventsw: 0
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | pid: 6994
[2025-11-25 05:00:35] 2025-11-25 09:59:33,165 | INFO     | pgrp: 6994
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | corecount: 8
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | event service: False
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | sizes: {0: 2284259, 3: 2284521, 11: 2284549, 69332: 2340663, 69333: 2340662, 69338: 2349901, 69344: 2350187}
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | --------------------------------------------------
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | 
[2025-11-25 05:00:35] 2025-11-25 09:59:33,166 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 05:00:35] 2025-11-25 09:59:33,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:00:35] 2025-11-25 09:59:33,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:00:35] 2025-11-25 09:59:33,203 | INFO     | job 6895365896 has completed (purged errors)
[2025-11-25 05:00:35] 2025-11-25 09:59:33,204 | INFO     | overall cleanup function is called
[2025-11-25 05:00:35] 2025-11-25 09:59:34,220 | INFO     | --- collectZombieJob: --- 10, [6994]
[2025-11-25 05:00:35] 2025-11-25 09:59:34,220 | INFO     | zombie collector waiting for pid 6994
[2025-11-25 05:00:35] 2025-11-25 09:59:34,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:00:35] 2025-11-25 09:59:34,220 | INFO     | collected zombie processes
[2025-11-25 05:00:35] 2025-11-25 09:59:34,220 | INFO     | will attempt to kill all subprocesses of pid=6994
[2025-11-25 05:00:35] 2025-11-25 09:59:34,398 | INFO     | process IDs to be killed: [6994] (in reverse order)
[2025-11-25 05:00:35] 2025-11-25 09:59:34,519 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:00:35] 2025-11-25 09:59:34,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:00:35] 2025-11-25 09:59:34,525 | INFO     | did not find any defunct processes belonging to 6994
[2025-11-25 05:00:35] 2025-11-25 09:59:34,530 | INFO     | did not find any defunct processes belonging to 6994
[2025-11-25 05:00:35] 2025-11-25 09:59:34,532 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:00:35] 2025-11-25 09:59:34,532 | INFO     | ready for new job
[2025-11-25 05:00:35] 2025-11-25 09:59:34,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:00:35] 2025-11-25 09:59:34,538 | INFO     | ***************************************
[2025-11-25 05:00:35] 2025-11-25 09:59:34,538 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:00:35] 2025-11-25 09:59:34,538 | INFO     | ***************************************
[2025-11-25 05:00:35] 2025-11-25 09:59:34,538 | INFO     | 
[2025-11-25 05:00:35] 2025-11-25 09:59:34,539 | INFO     | architecture information:
[2025-11-25 05:00:35] 2025-11-25 09:59:34,540 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:00:35] 2025-11-25 09:59:34,553 | INFO     | cat /etc/os-release:
[2025-11-25 05:00:35] NAME="CentOS Linux"
[2025-11-25 05:00:35] VERSION="7 (Core)"
[2025-11-25 05:00:35] ID="centos"
[2025-11-25 05:00:35] ID_LIKE="rhel fedora"
[2025-11-25 05:00:35] VERSION_ID="7"
[2025-11-25 05:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:00:35] ANSI_COLOR="0;31"
[2025-11-25 05:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:00:35] HOME_URL="https://www.centos.org/"
[2025-11-25 05:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:00:35] 
[2025-11-25 05:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:00:35] 
[2025-11-25 05:00:35] 2025-11-25 09:59:34,554 | INFO     | ***************************************
[2025-11-25 05:00:35] 2025-11-25 09:59:35,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 05:00:35] 2025-11-25 09:59:35,074 | INFO     | sufficient remaining disk space (25518145536 B)
[2025-11-25 05:00:35] 2025-11-25 09:59:35,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:00:35] 2025-11-25 09:59:35,074 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:00:35] 2025-11-25 09:59:35,075 | INFO     | update_server=False
[2025-11-25 05:00:35] 2025-11-25 09:59:35,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:00:35] 2025-11-25 09:59:35,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:00:35] 2025-11-25 09:59:35,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:00:35] 2025-11-25 09:59:35,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:00:35] 2025-11-25 09:59:35,076 | INFO     | aborting loop
[2025-11-25 05:00:35] 2025-11-25 09:59:35,377 | INFO     | all job control threads have been joined
[2025-11-25 05:00:35] 2025-11-25 09:59:35,987 | INFO     | all payload control threads have been joined
[2025-11-25 05:00:35] 2025-11-25 09:59:36,011 | INFO     | all data control threads have been joined
[2025-11-25 05:00:35] 2025-11-25 09:59:36,081 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,081 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,082 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,261 | INFO     | [job] validate thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,383 | INFO     | [job] control thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,731 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,845 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,853 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:36,993 | INFO     | [payload] control thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,017 | INFO     | [data] control thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,082 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,207 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,390 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:00:35] 2025-11-25 09:59:37,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:00:35] 2025-11-25 09:59:41,480 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:00:35] 2025-11-25 10:00:04,488 | INFO     | PID=25669 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 05:00:35] 2025-11-25 10:00:04,489 | INFO     | .. there are 3 such processes running
[2025-11-25 05:00:35] 2025-11-25 10:00:04,490 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:00:35] 2025-11-25 10:00:04,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:00:35] 2025-11-25 10:00:04,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:00:35] 2025-11-25 10:00:29,795 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:00:35] 2025-11-25 10:00:29,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818515543872)>', '<ExcThread(monitor, started 139818054952704)>']
[2025-11-25 05:00:35] 2025-11-25 10:00:30,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:00:35] 2025-11-25 10:00:30,616 | INFO     | [monitor] control thread has ended
[2025-11-25 05:00:35] 2025-11-25 10:00:34,876 | INFO     | all workflow threads have been joined
[2025-11-25 05:00:35] 2025-11-25 10:00:34,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:00:35] 2025-11-25 10:00:34,877 | INFO     | traces error code: 0
[2025-11-25 05:00:35] 2025-11-25 10:00:34,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:00:35] 2025-11-25 10:00:35,010 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:00:35] 2025-11-25 10:00:35,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:00:35] 2025-11-25 10:00:35,014 [wrapper] pilotpid: 25669
[2025-11-25 05:00:35] 2025-11-25 10:00:35,016 [wrapper] Pilot exit status: 0
[2025-11-25 05:00:35] 2025-11-25 10:00:35,025 [wrapper] pandaids: 6895365896
[2025-11-25 05:00:35] 2025-11-25 10:00:35,067 [wrapper] cleanup supervisor_pilot  6089 25670
[2025-11-25 05:00:35] 2025-11-25 10:00:35,069 [wrapper] Test setup, not cleaning
[2025-11-25 05:00:35] 2025-11-25 10:00:35,071 [wrapper] apfmon messages muted
[2025-11-25 05:00:35] 2025-11-25 10:00:35,074 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:00:35] 2025-11-25 10:00:35,076 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:00:35]  *** Error codes and diagnostics ***
[2025-11-25 05:00:35]     "exeErrorCode": 0,
[2025-11-25 05:00:35]     "exeErrorDiag": "",
[2025-11-25 05:00:35]     "pilotErrorCode": 0,
[2025-11-25 05:00:35]     "pilotErrorDiag": "",
[2025-11-25 05:00:35]  *** Listing of results directory ***
[2025-11-25 05:00:35] total 1323240
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-25 05:00:35] -rwx------ 1 boincer umatlas     36292 Nov 23 13:19 runpilot2-wrapper.sh
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:19 queuedata.json
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas       100 Nov 24 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:00:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 09:41 run_atlas
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas       105 Nov 24 09:41 job.xml
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas 410194311 Nov 24 09:43 EVNT.47483658._000839.pool.root.1
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:43 start_atlas.sh
[2025-11-25 05:00:35] drwxrwx--x 2 boincer umatlas      4096 Nov 24 09:43 shared
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas    611279 Nov 24 09:43 input.tar.gz
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas         0 Nov 24 09:43 boinc_lockfile
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 09:43 pandaJob.out
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas        57 Nov 24 09:43 setup.sh.local
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas    988283 Nov 24 09:43 agis_schedconf.cvmfs.json
[2025-11-25 05:00:35] drwx------ 7 boincer umatlas      4096 Nov 24 09:43 pilot3
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas       533 Nov 25 04:48 boinc_task_state.xml
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 04:57 init_data.xml
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas 917122456 Nov 25 04:58 HITS.47556137._008259.pool.root.1
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas      1076 Nov 25 04:59 memory_monitor_summary.json
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas   1516240 Nov 25 04:59 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas   2297515 Nov 25 04:59 log.47556137._008259.job.log.tgz.1
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas      8679 Nov 25 04:59 heartbeat.json
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas        95 Nov 25 05:00 pilot_heartbeat.json
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 05:00 boinc_mmap_file
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas        29 Nov 25 05:00 wrapper_checkpoint.txt
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas      4821 Nov 25 05:00 pilotlog.txt
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas   9561993 Nov 25 05:00 log.47556137._008259.job.log.1
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas       353 Nov 25 05:00 output.list
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas       620 Nov 25 05:00 runtime_log
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas  11878400 Nov 25 05:00 result.tar.gz
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 05:00 runtime_log.err
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas       668 Nov 25 05:00 E9CMDmcrTh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmufIKDmCpdTsm.diag
[2025-11-25 05:00:35] -rw-r--r-- 1 boincer umatlas     21288 Nov 25 05:00 stderr.txt
[2025-11-25 05:00:35] HITS file was successfully produced:
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas 917122456 Nov 25 04:58 shared/HITS.pool.root.1
[2025-11-25 05:00:35]  *** Contents of shared directory: ***
[2025-11-25 05:00:35] total 1308436
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas 410194311 Nov 24 09:43 ATLAS.root_0
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:43 start_atlas.sh
[2025-11-25 05:00:35] -rw-r--r-- 2 boincer umatlas    611279 Nov 24 09:43 input.tar.gz
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas 917122456 Nov 25 04:58 HITS.pool.root.1
[2025-11-25 05:00:35] -rw------- 1 boincer umatlas  11878400 Nov 25 05:00 result.tar.gz
05:00:36 (19736): run_atlas exited; CPU time 537499.342913
05:00:36 (19736): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN