Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:05:02 (27850): wrapper (7.7.26015): starting
10:05:02 (27850): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 10:05:02] Arguments: --nthreads 8
[2025-11-24 10:05:02] Threads: 8
[2025-11-24 10:05:02] Checking for CVMFS
[2025-11-24 10:05:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:05:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:05:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:05:03] 2.11.2.0 2989 70578 81240 153248 0 81 13972712 20275201 1 130560 0 20049678 99.884 3676256 29282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:05:03] CVMFS is ok
[2025-11-24 10:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:05:03] Further information can be found at the LHC@home message board.
[2025-11-24 10:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:05:03] Checking for apptainer binary...
[2025-11-24 10:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:05:03] Running /usr/bin/apptainer --version
[2025-11-24 10:05:03] apptainer version 1.3.2-1.el7
[2025-11-24 10:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:05:05] c-204-24.aglt2.org
[2025-11-24 10:05:05] apptainer works
[2025-11-24 10:05:05] Set ATHENA_PROC_NUMBER=8
[2025-11-24 10:05:05] Set ATHENA_CORE_NUMBER=8
[2025-11-24 10:05:05] Starting ATLAS job with PandaID=6895365641
[2025-11-24 10:05:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:42:50]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:42:50] 2025-11-25 03:42:15,298 | INFO     | time since job start (45412s) is within the limit (172800.0s)
[2025-11-24 22:42:50] 2025-11-25 03:42:17,305 | INFO     | time since job start (45414s) is within the limit (172800.0s)
[2025-11-24 22:42:50] 2025-11-25 03:42:17,318 | INFO     | monitor loop #3347: job 0:6895365641 is in state 'finished'
[2025-11-24 22:42:50] 2025-11-25 03:42:17,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,021 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 22:42:50] 2025-11-25 03:42:18,025 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-24 22:42:50] 2025-11-25 03:42:18,028 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365641/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,029 | INFO     | extracted standard info from prmon json
[2025-11-24 22:42:50] 2025-11-25 03:42:18,030 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:42:50] 2025-11-25 03:42:18,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:42:50] 2025-11-25 03:42:18,042 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:42:50] 2025-11-25 03:42:18,043 | INFO     | sum of square deviations: 127701419050.83743
[2025-11-24 22:42:50] 2025-11-25 03:42:18,054 | INFO     | sum of deviations: 867461984359.5687
[2025-11-24 22:42:50] 2025-11-25 03:42:18,055 | INFO     | mean x: 1764019419.014785
[2025-11-24 22:42:50] 2025-11-25 03:42:18,055 | INFO     | mean y: 2864756.311827957
[2025-11-24 22:42:50] 2025-11-25 03:42:18,055 | INFO     | intersect: -11979929147.162373
[2025-11-24 22:42:50] 2025-11-25 03:42:18,056 | INFO     | chi2: 5.602542814192614
[2025-11-24 22:42:50] 2025-11-25 03:42:18,057 | INFO     | sum of square deviations: 125144166984.5036
[2025-11-24 22:42:50] 2025-11-25 03:42:18,068 | INFO     | sum of deviations: 1090113894791.1449
[2025-11-24 22:42:50] 2025-11-25 03:42:18,068 | INFO     | mean x: 1764019266.5182679
[2025-11-24 22:42:50] 2025-11-25 03:42:18,068 | INFO     | mean y: 2878028.5818673884
[2025-11-24 22:42:50] 2025-11-25 03:42:18,068 | INFO     | intersect: -15363254963.848915
[2025-11-24 22:42:50] 2025-11-25 03:42:18,069 | INFO     | chi2: 2.964455003970372
[2025-11-24 22:42:50] 2025-11-25 03:42:18,069 | INFO     | current chi2=2.964455003970372 (change=47.0873297663932 %)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,070 | INFO     | sum of square deviations: 122621287655.65112
[2025-11-24 22:42:50] 2025-11-25 03:42:18,081 | INFO     | sum of deviations: 1188197626334.9973
[2025-11-24 22:42:50] 2025-11-25 03:42:18,081 | INFO     | mean x: 1764019114.0217984
[2025-11-24 22:42:50] 2025-11-25 03:42:18,081 | INFO     | mean y: 2883952.0626703
[2025-11-24 22:42:50] 2025-11-25 03:42:18,082 | INFO     | intersect: -17090423125.060244
[2025-11-24 22:42:50] 2025-11-25 03:42:18,082 | INFO     | chi2: 2.3274176699807585
[2025-11-24 22:42:50] 2025-11-25 03:42:18,083 | INFO     | current chi2=2.3274176699807585 (change=21.48918884369683 %)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,083 | INFO     | right removable region: 733
[2025-11-24 22:42:50] 2025-11-25 03:42:18,083 | INFO     | sum of square deviations: 125143933354.50356
[2025-11-24 22:42:50] 2025-11-25 03:42:18,095 | INFO     | sum of deviations: 669119917585.6028
[2025-11-24 22:42:50] 2025-11-25 03:42:18,095 | INFO     | mean x: 1764019571.5182679
[2025-11-24 22:42:50] 2025-11-25 03:42:18,095 | INFO     | mean y: 2876564.251691475
[2025-11-24 22:42:50] 2025-11-25 03:42:18,095 | INFO     | intersect: -9428987999.011349
[2025-11-24 22:42:50] 2025-11-25 03:42:18,096 | INFO     | chi2: 3.4794984552564903
[2025-11-24 22:42:50] 2025-11-25 03:42:18,096 | INFO     | current chi2=3.4794984552564903 (change=37.89429959478279 %)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,097 | INFO     | sum of square deviations: 122620865352.69344
[2025-11-24 22:42:50] 2025-11-25 03:42:18,108 | INFO     | sum of deviations: 626450270316.0814
[2025-11-24 22:42:50] 2025-11-25 03:42:18,108 | INFO     | mean x: 1764019724.020436
[2025-11-24 22:42:50] 2025-11-25 03:42:18,109 | INFO     | mean y: 2879142.061307902
[2025-11-24 22:42:50] 2025-11-25 03:42:18,109 | INFO     | intersect: -9009213781.740816
[2025-11-24 22:42:50] 2025-11-25 03:42:18,110 | INFO     | chi2: 3.441085401687679
[2025-11-24 22:42:50] 2025-11-25 03:42:18,110 | INFO     | current chi2=3.441085401687679 (change=1.1039824866362762 %)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,110 | INFO     | left removable region: 20
[2025-11-24 22:42:50] 2025-11-25 03:42:18,111 | INFO     | sum of square deviations: 112394539043.5398
[2025-11-24 22:42:50] 2025-11-25 03:42:18,122 | INFO     | sum of deviations: 873462797857.2649
[2025-11-24 22:42:50] 2025-11-25 03:42:18,122 | INFO     | mean x: 1764019693.5315568
[2025-11-24 22:42:50] 2025-11-25 03:42:18,122 | INFO     | mean y: 2903567.788218794
[2025-11-24 22:42:50] 2025-11-25 03:42:18,123 | INFO     | intersect: -13705997150.159527
[2025-11-24 22:42:50] 2025-11-25 03:42:18,124 | INFO     | chi2: 0.1087124641713081
[2025-11-24 22:42:50] 2025-11-25 03:42:18,124 | INFO     | current memory leak: 7.77 B/s (using 713 data points, chi2=0.11)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,124 | INFO     | could have reported an average CPU frequency of 2182 MHz (28 samples)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,124 | INFO     | ..............................
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . Timing measurements:
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . get job = 0 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . initial setup = 2 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . payload setup = 9 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . stage-in = 0 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . payload execution = 45372 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . stage-out = 3 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,125 | INFO     | . log creation = 0 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,126 | INFO     | ..............................
[2025-11-24 22:42:50] 2025-11-25 03:42:18,217 | INFO     | 
[2025-11-24 22:42:50] 2025-11-25 03:42:18,217 | INFO     | job summary report
[2025-11-24 22:42:50] 2025-11-25 03:42:18,217 | INFO     | --------------------------------------------------
[2025-11-24 22:42:50] 2025-11-25 03:42:18,218 | INFO     | PanDA job id: 6895365641
[2025-11-24 22:42:50] 2025-11-25 03:42:18,218 | INFO     | task id: 47556137
[2025-11-24 22:42:50] 2025-11-25 03:42:18,218 | INFO     | errors: (none)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:42:50] 2025-11-25 03:42:18,218 | INFO     | pilot state: finished 
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | transexitcode: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | exeerrorcode: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | exeerrordiag: 
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | exitcode: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | exitmsg: OK
[2025-11-24 22:42:50] 2025-11-25 03:42:18,219 | INFO     | cpuconsumptiontime: 350688 s
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | nevents: 1000
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | neventsw: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | pid: 6497
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | pgrp: 6497
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | corecount: 8
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | event service: False
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | sizes: {0: 2284259, 1: 2284259, 7: 2284549, 11: 2284577, 45386: 2330670, 45391: 2339848, 45397: 2340038}
[2025-11-24 22:42:50] 2025-11-25 03:42:18,220 | INFO     | --------------------------------------------------
[2025-11-24 22:42:50] 2025-11-25 03:42:18,221 | INFO     | 
[2025-11-24 22:42:50] 2025-11-25 03:42:18,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 22:42:50] 2025-11-25 03:42:18,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:42:50] 2025-11-25 03:42:18,254 | INFO     | job 6895365641 has completed (purged errors)
[2025-11-24 22:42:50] 2025-11-25 03:42:18,255 | INFO     | overall cleanup function is called
[2025-11-24 22:42:50] 2025-11-25 03:42:19,270 | INFO     | --- collectZombieJob: --- 10, [6497]
[2025-11-24 22:42:50] 2025-11-25 03:42:19,270 | INFO     | zombie collector waiting for pid 6497
[2025-11-24 22:42:50] 2025-11-25 03:42:19,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:42:50] 2025-11-25 03:42:19,271 | INFO     | collected zombie processes
[2025-11-24 22:42:50] 2025-11-25 03:42:19,271 | INFO     | will attempt to kill all subprocesses of pid=6497
[2025-11-24 22:42:50] 2025-11-25 03:42:19,368 | INFO     | process IDs to be killed: [6497] (in reverse order)
[2025-11-24 22:42:50] 2025-11-25 03:42:19,426 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:42:50] 2025-11-25 03:42:19,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:42:50] 2025-11-25 03:42:19,431 | INFO     | did not find any defunct processes belonging to 6497
[2025-11-24 22:42:50] 2025-11-25 03:42:19,433 | INFO     | did not find any defunct processes belonging to 6497
[2025-11-24 22:42:50] 2025-11-25 03:42:19,436 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:42:50] 2025-11-25 03:42:19,436 | INFO     | ready for new job
[2025-11-24 22:42:50] 2025-11-25 03:42:19,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:42:50] 2025-11-25 03:42:19,441 | INFO     | ***************************************
[2025-11-24 22:42:50] 2025-11-25 03:42:19,441 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:42:50] 2025-11-25 03:42:19,441 | INFO     | ***************************************
[2025-11-24 22:42:50] 2025-11-25 03:42:19,441 | INFO     | 
[2025-11-24 22:42:50] 2025-11-25 03:42:19,442 | INFO     | architecture information:
[2025-11-24 22:42:50] 2025-11-25 03:42:19,442 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:42:50] 2025-11-25 03:42:19,461 | INFO     | cat /etc/os-release:
[2025-11-24 22:42:50] NAME="CentOS Linux"
[2025-11-24 22:42:50] VERSION="7 (Core)"
[2025-11-24 22:42:50] ID="centos"
[2025-11-24 22:42:50] ID_LIKE="rhel fedora"
[2025-11-24 22:42:50] VERSION_ID="7"
[2025-11-24 22:42:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:42:50] ANSI_COLOR="0;31"
[2025-11-24 22:42:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:42:50] HOME_URL="https://www.centos.org/"
[2025-11-24 22:42:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:42:50] 
[2025-11-24 22:42:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:42:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:42:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:42:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:42:50] 
[2025-11-24 22:42:50] 2025-11-25 03:42:19,462 | INFO     | ***************************************
[2025-11-24 22:42:50] 2025-11-25 03:42:19,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 22:42:50] 2025-11-25 03:42:19,987 | INFO     | sufficient remaining disk space (17598251008 B)
[2025-11-24 22:42:50] 2025-11-25 03:42:19,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:42:50] 2025-11-25 03:42:19,988 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:42:50] 2025-11-25 03:42:19,988 | INFO     | update_server=False
[2025-11-24 22:42:50] 2025-11-25 03:42:19,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:42:50] 2025-11-25 03:42:19,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:42:50] 2025-11-25 03:42:20,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:42:50] 2025-11-25 03:42:20,334 | INFO     | all payload control threads have been joined
[2025-11-24 22:42:50] 2025-11-25 03:42:20,726 | INFO     | all job control threads have been joined
[2025-11-24 22:42:50] 2025-11-25 03:42:20,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:42:50] 2025-11-25 03:42:20,827 | INFO     | aborting loop
[2025-11-24 22:42:50] 2025-11-25 03:42:20,835 | INFO     | all data control threads have been joined
[2025-11-24 22:42:50] 2025-11-25 03:42:20,994 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:20,994 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,340 | INFO     | [payload] control thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,347 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,417 | INFO     | [job] validate thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,426 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,480 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,494 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,732 | INFO     | [job] control thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,777 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,827 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:21,840 | INFO     | [data] control thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:22,026 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:22,360 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:22,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:42:50] 2025-11-25 03:42:26,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:42:50] 2025-11-25 03:42:38,354 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:42:50] 2025-11-25 03:42:38,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209522558784)>', '<ExcThread(monitor, started 140208863438592)>']
[2025-11-24 22:42:50] 2025-11-25 03:42:43,522 | INFO     | all workflow threads have been joined
[2025-11-24 22:42:50] 2025-11-25 03:42:43,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:42:50] 2025-11-25 03:42:43,522 | INFO     | traces error code: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:43,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:42:50] 2025-11-25 03:42:50,517 | INFO     | PID=32317 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:42:50] 2025-11-25 03:42:50,518 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:42:50] 2025-11-25 03:42:50,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:42:50] 2025-11-25 03:42:50,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:42:50] 2025-11-25 03:42:50,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:42:50] 2025-11-25 03:42:50,518 | INFO     | [monitor] control thread has ended
[2025-11-24 22:42:50] 2025-11-25 03:42:50,638 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:42:50] 2025-11-25 03:42:50,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:42:50] 2025-11-25 03:42:50,648 [wrapper] pilotpid: 32317
[2025-11-24 22:42:50] 2025-11-25 03:42:50,653 [wrapper] Pilot exit status: 0
[2025-11-24 22:42:50] 2025-11-25 03:42:50,671 [wrapper] pandaids: 6895365641
[2025-11-24 22:42:50] 2025-11-25 03:42:50,718 [wrapper] cleanup supervisor_pilot  9480 32318
[2025-11-24 22:42:50] 2025-11-25 03:42:50,723 [wrapper] Test setup, not cleaning
[2025-11-24 22:42:50] 2025-11-25 03:42:50,728 [wrapper] apfmon messages muted
[2025-11-24 22:42:50] 2025-11-25 03:42:50,732 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:42:50] 2025-11-25 03:42:50,737 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:42:50]  *** Error codes and diagnostics ***
[2025-11-24 22:42:50]     "exeErrorCode": 0,
[2025-11-24 22:42:50]     "exeErrorDiag": "",
[2025-11-24 22:42:50]     "pilotErrorCode": 0,
[2025-11-24 22:42:50]     "pilotErrorDiag": "",
[2025-11-24 22:42:50]  *** Listing of results directory ***
[2025-11-24 22:42:50] total 1313252
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-24 22:42:50] -rwx------ 1 boincer umatlas     36292 Nov 23 12:27 runpilot2-wrapper.sh
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:27 queuedata.json
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:42:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:05 run_atlas
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:05 job.xml
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas 409789666 Nov 24 10:05 EVNT.47483658._000826.pool.root.1
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:05 start_atlas.sh
[2025-11-24 22:42:50] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:05 shared
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 10:05 input.tar.gz
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:05 boinc_lockfile
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:05 pandaJob.out
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas        57 Nov 24 10:05 setup.sh.local
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas    988283 Nov 24 10:05 agis_schedconf.cvmfs.json
[2025-11-24 22:42:50] drwx------ 5 boincer umatlas      4096 Nov 24 10:05 pilot3
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas       532 Nov 24 22:30 boinc_task_state.xml
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas      5913 Nov 24 22:37 init_data.xml
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas 914558314 Nov 24 22:41 HITS.47556137._008130.pool.root.1
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas      1062 Nov 24 22:42 memory_monitor_summary.json
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas   1516227 Nov 24 22:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas   1996853 Nov 24 22:42 log.47556137._008130.job.log.tgz.1
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas      8659 Nov 24 22:42 heartbeat.json
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 22:42 boinc_mmap_file
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas        29 Nov 24 22:42 wrapper_checkpoint.txt
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas        95 Nov 24 22:42 pilot_heartbeat.json
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas       745 Nov 24 22:42 pilotlog.txt
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas   6255482 Nov 24 22:42 log.47556137._008130.job.log.1
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas       353 Nov 24 22:42 output.list
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas       620 Nov 24 22:42 runtime_log
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas   8273920 Nov 24 22:42 result.tar.gz
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 22:42 runtime_log.err
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas       668 Nov 24 22:42 qkNMDmh2Sh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJfIKDmzSa4tn.diag
[2025-11-24 22:42:50] -rw-r--r-- 1 boincer umatlas     21285 Nov 24 22:42 stderr.txt
[2025-11-24 22:42:50] HITS file was successfully produced:
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas 914558314 Nov 24 22:41 shared/HITS.pool.root.1
[2025-11-24 22:42:50]  *** Contents of shared directory: ***
[2025-11-24 22:42:50] total 1301996
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas 409789666 Nov 24 10:05 ATLAS.root_0
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:05 start_atlas.sh
[2025-11-24 22:42:50] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 10:05 input.tar.gz
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas 914558314 Nov 24 22:41 HITS.pool.root.1
[2025-11-24 22:42:50] -rw------- 1 boincer umatlas   8273920 Nov 24 22:42 result.tar.gz
22:42:52 (27850): run_atlas exited; CPU time 346494.473529
22:42:52 (27850): called boinc_finish(0)

</stderr_txt>
]]>

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