Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:34:38 (1924913): wrapper (7.7.26015): starting
14:34:38 (1924913): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 14:34:38] Arguments: --nthreads 12
[2025-11-25 14:34:38] Threads: 12
[2025-11-25 14:34:38] Checking for CVMFS
[2025-11-25 14:34:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:34:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:34:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:34:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:34:39] 2.13.3.0 14095 5683 91940 153284 2 81 3798039 4097025 1043 130560 0 4417415 99.954 449506 19735 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 14:34:39] CVMFS is ok
[2025-11-25 14:34:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:34:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:34:39] Further information can be found at the LHC@home message board.
[2025-11-25 14:34:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:34:39] Checking for apptainer binary...
[2025-11-25 14:34:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:34:39] Running /usr/bin/apptainer --version
[2025-11-25 14:34:39] apptainer version 1.4.4-1.el9
[2025-11-25 14:34:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:34:39] pckelar7.cern.ch
[2025-11-25 14:34:39] apptainer works
[2025-11-25 14:34:39] Set ATHENA_PROC_NUMBER=12
[2025-11-25 14:34:39] Set ATHENA_CORE_NUMBER=12
[2025-11-25 14:34:39] Starting ATLAS job with PandaID=6891584279
[2025-11-25 14:34:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:17:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:17:07] 2025-11-26 01:16:12,407 | INFO     | monitor loop #2968: job 0:6891584279 is in state 'finished'
[2025-11-26 02:17:07] 2025-11-26 01:16:12,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:17:07] 2025-11-26 01:16:13,280 | INFO     | time since job start (42083s) is within the limit (172800.0s)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,217 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:17:07] 2025-11-26 01:16:14,223 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2825.187208333334
[2025-11-26 02:17:07] 2025-11-26 01:16:14,228 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6891584279/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,229 | INFO     | extracted standard info from prmon json
[2025-11-26 02:17:07] 2025-11-26 01:16:14,229 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:17:07] 2025-11-26 01:16:14,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:17:07] 2025-11-26 01:16:14,249 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:17:07] 2025-11-26 01:16:14,251 | INFO     | sum of square deviations: 101864710674.17387
[2025-11-26 02:17:07] 2025-11-26 01:16:14,266 | INFO     | sum of deviations: 1439817917080.6528
[2025-11-26 02:17:07] 2025-11-26 01:16:14,266 | INFO     | mean x: 1764098737.4782608
[2025-11-26 02:17:07] 2025-11-26 01:16:14,267 | INFO     | mean y: 3559575.3768115942
[2025-11-26 02:17:07] 2025-11-26 01:16:14,267 | INFO     | intersect: -24931287369.263157
[2025-11-26 02:17:07] 2025-11-26 01:16:14,268 | INFO     | chi2: 6.632212366006901
[2025-11-26 02:17:07] 2025-11-26 01:16:14,269 | INFO     | sum of square deviations: 99666466021.85394
[2025-11-26 02:17:07] 2025-11-26 01:16:14,285 | INFO     | sum of deviations: 1727383916615.6775
[2025-11-26 02:17:07] 2025-11-26 01:16:14,285 | INFO     | mean x: 1764098584.9854014
[2025-11-26 02:17:07] 2025-11-26 01:16:14,285 | INFO     | mean y: 3579513.3678832115
[2025-11-26 02:17:07] 2025-11-26 01:16:14,285 | INFO     | intersect: -30571152838.033833
[2025-11-26 02:17:07] 2025-11-26 01:16:14,286 | INFO     | chi2: 3.344515217755971
[2025-11-26 02:17:07] 2025-11-26 01:16:14,287 | INFO     | current chi2=3.344515217755971 (change=49.571650707415074 %)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,288 | INFO     | sum of square deviations: 97500082431.96294
[2025-11-26 02:17:07] 2025-11-26 01:16:14,303 | INFO     | sum of deviations: 1837367216739.2048
[2025-11-26 02:17:07] 2025-11-26 01:16:14,303 | INFO     | mean x: 1764098432.4926472
[2025-11-26 02:17:07] 2025-11-26 01:16:14,304 | INFO     | mean y: 3587238.0411764705
[2025-11-26 02:17:07] 2025-11-26 01:16:14,304 | INFO     | intersect: -33240452624.43623
[2025-11-26 02:17:07] 2025-11-26 01:16:14,305 | INFO     | chi2: 2.587870704508641
[2025-11-26 02:17:07] 2025-11-26 01:16:14,305 | INFO     | current chi2=2.587870704508641 (change=22.623443578020456 %)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,305 | INFO     | right removable region: 679
[2025-11-26 02:17:07] 2025-11-26 01:16:14,306 | INFO     | sum of square deviations: 99666096118.82341
[2025-11-26 02:17:07] 2025-11-26 01:16:14,322 | INFO     | sum of deviations: 1192159392244.5935
[2025-11-26 02:17:07] 2025-11-26 01:16:14,322 | INFO     | mean x: 1764098889.9839416
[2025-11-26 02:17:07] 2025-11-26 01:16:14,322 | INFO     | mean y: 3576727.0540145985
[2025-11-26 02:17:07] 2025-11-26 01:16:14,322 | INFO     | intersect: -21097752034.085438
[2025-11-26 02:17:07] 2025-11-26 01:16:14,323 | INFO     | chi2: 4.269266326218732
[2025-11-26 02:17:07] 2025-11-26 01:16:14,323 | INFO     | current chi2=4.269266326218732 (change=35.62832293940617 %)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,324 | INFO     | sum of square deviations: 97499510013.82211
[2025-11-26 02:17:07] 2025-11-26 01:16:14,340 | INFO     | sum of deviations: 1122175136956.2905
[2025-11-26 02:17:07] 2025-11-26 01:16:14,340 | INFO     | mean x: 1764099042.4838235
[2025-11-26 02:17:07] 2025-11-26 01:16:14,340 | INFO     | mean y: 3581650.980882353
[2025-11-26 02:17:07] 2025-11-26 01:16:14,341 | INFO     | intersect: -20300398177.462376
[2025-11-26 02:17:07] 2025-11-26 01:16:14,341 | INFO     | chi2: 4.20084566468892
[2025-11-26 02:17:07] 2025-11-26 01:16:14,342 | INFO     | current chi2=4.20084566468892 (change=1.602632778133844 %)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,342 | INFO     | left removable region: 20
[2025-11-26 02:17:07] 2025-11-26 01:16:14,343 | INFO     | sum of square deviations: 88742917242.99838
[2025-11-26 02:17:07] 2025-11-26 01:16:14,357 | INFO     | sum of deviations: 1423036250251.8652
[2025-11-26 02:17:07] 2025-11-26 01:16:14,357 | INFO     | mean x: 1764099011.9984825
[2025-11-26 02:17:07] 2025-11-26 01:16:14,357 | INFO     | mean y: 3616385.86646434
[2025-11-26 02:17:07] 2025-11-26 01:16:14,358 | INFO     | intersect: -28284577433.966564
[2025-11-26 02:17:07] 2025-11-26 01:16:14,359 | INFO     | chi2: 0.10874978325625242
[2025-11-26 02:17:07] 2025-11-26 01:16:14,359 | INFO     | current memory leak: 16.04 B/s (using 659 data points, chi2=0.11)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,360 | INFO     | could have reported an average CPU frequency of 2802 MHz (26 samples)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | ..............................
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | . Timing measurements:
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | . get job = 0 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | . initial setup = 2 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | . payload setup = 9 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,361 | INFO     | . stage-in = 0 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,362 | INFO     | . payload execution = 42039 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,362 | INFO     | . stage-out = 2 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,362 | INFO     | . log creation = 0 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,362 | INFO     | ..............................
[2025-11-26 02:17:07] 2025-11-26 01:16:14,973 | INFO     | 
[2025-11-26 02:17:07] 2025-11-26 01:16:14,974 | INFO     | job summary report
[2025-11-26 02:17:07] 2025-11-26 01:16:14,974 | INFO     | --------------------------------------------------
[2025-11-26 02:17:07] 2025-11-26 01:16:14,974 | INFO     | PanDA job id: 6891584279
[2025-11-26 02:17:07] 2025-11-26 01:16:14,974 | INFO     | task id: 47493068
[2025-11-26 02:17:07] 2025-11-26 01:16:14,974 | INFO     | errors: (none)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | pilot state: finished 
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | transexitcode: 0
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | exeerrorcode: 0
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | exeerrordiag: 
[2025-11-26 02:17:07] 2025-11-26 01:16:14,975 | INFO     | exitcode: 0
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | exitmsg: OK
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | cpuconsumptiontime: 491462 s
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | nevents: 1000
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | neventsw: 0
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | pid: 1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:14,976 | INFO     | pgrp: 1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | corecount: 12
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | event service: False
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | sizes: {0: 2284304, 1: 2284304, 5: 2284594, 12: 2284650, 42052: 2328281, 42055: 2337275, 42058: 2337459, 42067: 2337705}
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | --------------------------------------------------
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | 
[2025-11-26 02:17:07] 2025-11-26 01:16:14,977 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 02:17:07] 2025-11-26 01:16:14,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:14,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:17:07] 2025-11-26 01:16:15,000 | INFO     | job 6891584279 has completed (purged errors)
[2025-11-26 02:17:07] 2025-11-26 01:16:15,000 | INFO     | overall cleanup function is called
[2025-11-26 02:17:07] 2025-11-26 01:16:16,031 | INFO     | --- collectZombieJob: --- 10, [1936270]
[2025-11-26 02:17:07] 2025-11-26 01:16:16,031 | INFO     | zombie collector waiting for pid 1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:16,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:17:07] 2025-11-26 01:16:16,032 | INFO     | collected zombie processes
[2025-11-26 02:17:07] 2025-11-26 01:16:16,032 | INFO     | will attempt to kill all subprocesses of pid=1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:16,209 | INFO     | process IDs to be killed: [1936270] (in reverse order)
[2025-11-26 02:17:07] 2025-11-26 01:16:16,265 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:17:07] 2025-11-26 01:16:16,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:17:07] 2025-11-26 01:16:16,272 | INFO     | did not find any defunct processes belonging to 1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:16,278 | INFO     | did not find any defunct processes belonging to 1936270
[2025-11-26 02:17:07] 2025-11-26 01:16:16,280 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:17:07] 2025-11-26 01:16:16,280 | INFO     | ready for new job
[2025-11-26 02:17:07] 2025-11-26 01:16:16,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:17:07] 2025-11-26 01:16:16,284 | INFO     | ***************************************
[2025-11-26 02:17:07] 2025-11-26 01:16:16,284 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:17:07] 2025-11-26 01:16:16,284 | INFO     | ***************************************
[2025-11-26 02:17:07] 2025-11-26 01:16:16,285 | INFO     | 
[2025-11-26 02:17:07] 2025-11-26 01:16:16,286 | INFO     | architecture information:
[2025-11-26 02:17:07] 2025-11-26 01:16:16,287 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:17:07] 2025-11-26 01:16:16,300 | INFO     | cat /etc/os-release:
[2025-11-26 02:17:07] NAME="CentOS Linux"
[2025-11-26 02:17:07] VERSION="7 (Core)"
[2025-11-26 02:17:07] ID="centos"
[2025-11-26 02:17:07] ID_LIKE="rhel fedora"
[2025-11-26 02:17:07] VERSION_ID="7"
[2025-11-26 02:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:17:07] ANSI_COLOR="0;31"
[2025-11-26 02:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:17:07] HOME_URL="https://www.centos.org/"
[2025-11-26 02:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:17:07] 
[2025-11-26 02:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:17:07] 
[2025-11-26 02:17:07] 2025-11-26 01:16:16,300 | INFO     | ***************************************
[2025-11-26 02:17:07] 2025-11-26 01:16:16,803 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 02:17:07] 2025-11-26 01:16:16,820 | INFO     | sufficient remaining disk space (1783356194816 B)
[2025-11-26 02:17:07] 2025-11-26 01:16:16,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:17:07] 2025-11-26 01:16:16,821 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:17:07] 2025-11-26 01:16:16,821 | INFO     | update_server=False
[2025-11-26 02:17:07] 2025-11-26 01:16:16,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:17:07] 2025-11-26 01:16:16,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:17:07] 2025-11-26 01:16:16,822 | INFO     | aborting loop
[2025-11-26 02:17:07] 2025-11-26 01:16:16,907 | INFO     | all job control threads have been joined
[2025-11-26 02:17:07] 2025-11-26 01:16:17,371 | INFO     | all payload control threads have been joined
[2025-11-26 02:17:07] 2025-11-26 01:16:17,543 | INFO     | all data control threads have been joined
[2025-11-26 02:17:07] 2025-11-26 01:16:17,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:17:07] 2025-11-26 01:16:17,826 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:17,827 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:17,912 | INFO     | [job] control thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,122 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,176 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,260 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,376 | INFO     | [payload] control thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,549 | INFO     | [data] control thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:18,916 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:19,043 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:19,223 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:19,267 | INFO     | [job] validate thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:19,329 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:19,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:17:07] 2025-11-26 01:16:19,763 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:20,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:17:07] 2025-11-26 01:16:20,534 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:24,106 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:17:07] 2025-11-26 01:16:46,580 | INFO     | PID=1928747 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:17:07] 2025-11-26 01:16:46,581 | INFO     | .. there are 2 such processes running
[2025-11-26 02:17:07] 2025-11-26 01:16:46,582 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:17:07] 2025-11-26 01:16:46,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:17:07] 2025-11-26 01:16:46,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:17:07] 2025-11-26 01:17:00,716 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:17:07] 2025-11-26 01:17:02,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011689273152)>', '<ExcThread(monitor, started 140011185870592)>']
[2025-11-26 02:17:07] 2025-11-26 01:17:03,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:17:07] 2025-11-26 01:17:03,667 | INFO     | [monitor] control thread has ended
[2025-11-26 02:17:07] 2025-11-26 01:17:07,724 | INFO     | all workflow threads have been joined
[2025-11-26 02:17:07] 2025-11-26 01:17:07,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:17:07] 2025-11-26 01:17:07,724 | INFO     | traces error code: 0
[2025-11-26 02:17:07] 2025-11-26 01:17:07,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:17:07] 2025-11-26 01:17:07,842 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:17:07] 2025-11-26 01:17:07,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:17:07] 2025-11-26 01:17:07,847 [wrapper] pilotpid: 1928747
[2025-11-26 02:17:07] 2025-11-26 01:17:07,849 [wrapper] Pilot exit status: 0
[2025-11-26 02:17:07] 2025-11-26 01:17:07,859 [wrapper] pandaids: 6891584279
[2025-11-26 02:17:07] 2025-11-26 01:17:07,895 [wrapper] cleanup supervisor_pilot 2154172 1928748
[2025-11-26 02:17:07] 2025-11-26 01:17:07,898 [wrapper] Test setup, not cleaning
[2025-11-26 02:17:07] 2025-11-26 01:17:07,901 [wrapper] apfmon messages muted
[2025-11-26 02:17:07] 2025-11-26 01:17:07,903 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:17:07] 2025-11-26 01:17:07,906 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:17:07]  *** Error codes and diagnostics ***
[2025-11-26 02:17:07]     "exeErrorCode": 0,
[2025-11-26 02:17:07]     "exeErrorDiag": "",
[2025-11-26 02:17:07]     "pilotErrorCode": 0,
[2025-11-26 02:17:07]     "pilotErrorDiag": "",
[2025-11-26 02:17:07]  *** Listing of results directory ***
[2025-11-26 02:17:07] total 1303436
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-26 02:17:07] -rwx------ 1 boinc boinc     36292 Nov 18 18:15 runpilot2-wrapper.sh
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:15 queuedata.json
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc       100 Nov 25 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:17:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 14:34 run_atlas
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc       105 Nov 25 14:34 job.xml
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc      6252 Nov 25 14:34 init_data.xml
[2025-11-26 02:17:07] -rw-r--r-- 2 boinc boinc 409538956 Nov 25 14:34 EVNT.47493065._000453.pool.root.1
[2025-11-26 02:17:07] -rw-r--r-- 2 boinc boinc     15120 Nov 25 14:34 start_atlas.sh
[2025-11-26 02:17:07] drwxrwx--x 2 boinc boinc      4096 Nov 25 14:34 shared
[2025-11-26 02:17:07] -rw-r--r-- 2 boinc boinc    590094 Nov 25 14:34 input.tar.gz
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc         0 Nov 25 14:34 boinc_lockfile
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc      2773 Nov 25 14:34 pandaJob.out
[2025-11-26 02:17:07] -rw------- 1 boinc boinc    991909 Nov 25 14:34 agis_schedconf.cvmfs.json
[2025-11-26 02:17:07] drwx------ 5 boinc boinc      4096 Nov 25 14:34 pilot3
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc       533 Nov 26 02:06 boinc_task_state.xml
[2025-11-26 02:17:07] -rw------- 1 boinc boinc 904833218 Nov 26 02:15 HITS.47493068._004522.pool.root.1
[2025-11-26 02:17:07] -rw------- 1 boinc boinc      1033 Nov 26 02:15 memory_monitor_summary.json
[2025-11-26 02:17:07] -rw------- 1 boinc boinc   1516240 Nov 26 02:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:17:07] -rw------- 1 boinc boinc   2385599 Nov 26 02:16 log.47493068._004522.job.log.tgz.1
[2025-11-26 02:17:07] -rw------- 1 boinc boinc      8610 Nov 26 02:16 heartbeat.json
[2025-11-26 02:17:07] -rw------- 1 boinc boinc        95 Nov 26 02:16 pilot_heartbeat.json
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc      8192 Nov 26 02:17 boinc_mmap_file
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc        29 Nov 26 02:17 wrapper_checkpoint.txt
[2025-11-26 02:17:07] -rw------- 1 boinc boinc      4825 Nov 26 02:17 pilotlog.txt
[2025-11-26 02:17:07] -rw------- 1 boinc boinc   5826866 Nov 26 02:17 log.47493068._004522.job.log.1
[2025-11-26 02:17:07] -rw------- 1 boinc boinc       353 Nov 26 02:17 output.list
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc       620 Nov 26 02:17 runtime_log
[2025-11-26 02:17:07] -rw------- 1 boinc boinc   8232960 Nov 26 02:17 result.tar.gz
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc      8728 Nov 26 02:17 runtime_log.err
[2025-11-26 02:17:07] -rw------- 1 boinc boinc       665 Nov 26 02:17 J9RLDm8Tef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFZFKDmtkq1rm.diag
[2025-11-26 02:17:07] -rw-r--r-- 1 boinc boinc     21323 Nov 26 02:17 stderr.txt
[2025-11-26 02:17:08] HITS file was successfully produced:
[2025-11-26 02:17:08] -rw------- 1 boinc boinc 904833218 Nov 26 02:15 shared/HITS.pool.root.1
[2025-11-26 02:17:08]  *** Contents of shared directory: ***
[2025-11-26 02:17:08] total 1292216
[2025-11-26 02:17:08] -rw-r--r-- 2 boinc boinc 409538956 Nov 25 14:34 ATLAS.root_0
[2025-11-26 02:17:08] -rw-r--r-- 2 boinc boinc     15120 Nov 25 14:34 start_atlas.sh
[2025-11-26 02:17:08] -rw-r--r-- 2 boinc boinc    590094 Nov 25 14:34 input.tar.gz
[2025-11-26 02:17:08] -rw------- 1 boinc boinc 904833218 Nov 26 02:15 HITS.pool.root.1
[2025-11-26 02:17:08] -rw------- 1 boinc boinc   8232960 Nov 26 02:17 result.tar.gz
02:17:09 (1924913): run_atlas exited; CPU time 491696.269439
02:17:09 (1924913): called boinc_finish(0)

</stderr_txt>
]]>

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